Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g15f
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.5  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = -3

Query: 236 DHKHLIVRSIWKIAAGSFQISSSSRVTVNVKQNPAVFVIRSTARIF 99
           DH    + + W+ +  +  I  +     + + NP+  V+R   RIF
Sbjct: 263 DHGTQFISNTWQNSLRAADIQPTLSSIRHPESNPSERVMRELGRIF 308


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 399  IFFLLSLFGGVFIFIEIL 346
            + FLL + GGV  +I IL
Sbjct: 1425 LHFLLQIIGGVTTYIIIL 1442


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/39 (20%), Positives = 17/39 (43%)
 Frame = +3

Query: 213 SHDEVFVISTRKWERRVRCHHDVRTSDTPSAGHIRSQPT 329
           SH+E+  +  R     +   H       P + H++ +P+
Sbjct: 323 SHEELSAMVNRCHPLSLSSDHQAMLHHNPMSHHLKQEPS 361


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,393
Number of Sequences: 336
Number of extensions: 2764
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)