Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g15f
         (577 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X02812-1|CAA26580.1|  391|Homo sapiens protein ( Human mRNA for ...    30   6.7  
M64347-1|AAA58470.1|  731|Homo sapiens fgflr protein.                  30   6.7  
M58051-1|AAA52450.1|  806|Homo sapiens fibroblast growth factor ...    30   6.7  
AY768549-1|AAU89726.1|  806|Homo sapiens fibroblast growth facto...    30   6.7  
AF487554-2|AAM22078.1|  769|Homo sapiens fibroblast growth facto...    30   6.7  
AF487554-1|AAM22079.1|  771|Homo sapiens fibroblast growth facto...    30   6.7  
AF245114-1|AAF63380.1|  694|Homo sapiens fibroblast growth facto...    30   6.7  
AB209441-1|BAD92678.1|  879|Homo sapiens fibroblast growth facto...    30   6.7  

>X02812-1|CAA26580.1|  391|Homo sapiens protein ( Human mRNA for
           transforming growth factor-beta (TGF-beta). ).
          Length = 391

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 9   LRTQQRVYVRAQHSAETKQKTKKKTVAFYNKNTCCAPNNKNRWILFDIHGYTRR 170
           LR  +R+ ++ +   E  QK    +   Y  N   AP++   W+ FD+ G  R+
Sbjct: 155 LRLLRRLKLKVEQHVELYQKYSNNSWR-YLSNRLLAPSDSPEWLSFDVTGVVRQ 207


>M64347-1|AAA58470.1|  731|Homo sapiens fgflr protein.
          Length = 731

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 213 SHDEVFVISTR-KWERRVRCHHDVRTSDTPSAG 308
           SH++    S R +  +RV CH  VR +D PS+G
Sbjct: 25  SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 57


>M58051-1|AAA52450.1|  806|Homo sapiens fibroblast growth factor
           receptor protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 213 SHDEVFVISTR-KWERRVRCHHDVRTSDTPSAG 308
           SH++    S R +  +RV CH  VR +D PS+G
Sbjct: 100 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 132


>AY768549-1|AAU89726.1|  806|Homo sapiens fibroblast growth factor
           receptor 3 (achondroplasia, thanatophoric dwarfism)
           protein.
          Length = 806

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 213 SHDEVFVISTR-KWERRVRCHHDVRTSDTPSAG 308
           SH++    S R +  +RV CH  VR +D PS+G
Sbjct: 100 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 132


>AF487554-2|AAM22078.1|  769|Homo sapiens fibroblast growth factor
           receptor 3 protein.
          Length = 769

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 213 SHDEVFVISTR-KWERRVRCHHDVRTSDTPSAG 308
           SH++    S R +  +RV CH  VR +D PS+G
Sbjct: 63  SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 95


>AF487554-1|AAM22079.1|  771|Homo sapiens fibroblast growth factor
           receptor 3 protein.
          Length = 771

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 213 SHDEVFVISTR-KWERRVRCHHDVRTSDTPSAG 308
           SH++    S R +  +RV CH  VR +D PS+G
Sbjct: 63  SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 95


>AF245114-1|AAF63380.1|  694|Homo sapiens fibroblast growth factor
           receptor 3 protein.
          Length = 694

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 213 SHDEVFVISTR-KWERRVRCHHDVRTSDTPSAG 308
           SH++    S R +  +RV CH  VR +D PS+G
Sbjct: 100 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 132


>AB209441-1|BAD92678.1|  879|Homo sapiens fibroblast growth factor
           receptor 3 isoform 1 precursor variant protein.
          Length = 879

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 213 SHDEVFVISTR-KWERRVRCHHDVRTSDTPSAG 308
           SH++    S R +  +RV CH  VR +D PS+G
Sbjct: 187 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSG 219


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,925,757
Number of Sequences: 237096
Number of extensions: 1460451
Number of successful extensions: 6940
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6940
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)