Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g13f
         (471 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   4.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 410 LHYFYFIMLRFNINL 454
           ++YFY + + FN++L
Sbjct: 56  IYYFYCVSITFNVHL 70


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +1

Query: 160 EDCIRQGGICVRTEECDPDNIST 228
           ++ +  G +C+ +E+  PD++ T
Sbjct: 502 QELVLGGEVCLWSEQVGPDSLET 524


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 279 AAGYSKVRLVWT*KLRNRRYVVWITFLRAHAYTSL 175
           +AG    RLV     R R  V  + FLR H +  L
Sbjct: 718 SAGDKYSRLVGDGSARRRFVVAVVGFLRRHNFKGL 752


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 214 DNISTISQFLCPN 252
           D + T+ QFL PN
Sbjct: 649 DGVDTLQQFLTPN 661


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 371 EM*NVYIMPIYIILHYFYFIMLRFNINLKI 460
           +M  +Y++ I I   YF +I  +F   + I
Sbjct: 374 DMTAIYVLLINIFASYFAYIFGKFACKIMI 403


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 371 EM*NVYIMPIYIILHYFYFIMLRFNINLKI 460
           +M  +Y++ I I   YF +I  +F   + I
Sbjct: 374 DMTAIYVLLINIFASYFAYIFGKFACKIMI 403


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 371 EM*NVYIMPIYIILHYFYFIMLRFNINLKI 460
           +M  +Y++ I I   YF +I  +F   + I
Sbjct: 374 DMTAIYVLLINIFASYFAYIFGKFACKIMI 403


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 371 EM*NVYIMPIYIILHYFYFIMLRFNINLKI 460
           +M  +Y++ I I   YF +I  +F   + I
Sbjct: 374 DMTAIYVLLINIFASYFAYIFGKFACKIMI 403


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,436
Number of Sequences: 336
Number of extensions: 2178
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)