Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g11f
         (621 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X61100-1|CAA43412.1|  727|Homo sapiens 75 kDa subunit NADH dehyd...   280   3e-75
BC030833-1|AAH30833.1|  727|Homo sapiens NADH dehydrogenase (ubi...   279   8e-75
BC022368-1|AAH22368.1|  727|Homo sapiens NADH dehydrogenase (ubi...   279   8e-75
AC007383-1|AAY15061.1|  727|Homo sapiens unknown protein.             279   8e-75

>X61100-1|CAA43412.1|  727|Homo sapiens 75 kDa subunit NADH
           dehydrogenase  precursor protein.
          Length = 727

 Score =  280 bits (686), Expect = 3e-75
 Identities = 135/200 (67%), Positives = 158/200 (79%), Gaps = 1/200 (0%)
 Frame = +1

Query: 25  MLRQPLSRALA-LTSPVRAAPLTARRFADQVQAQPEKVEVFIDDQPVHVVPGTTVLQAAA 201
           MLR P+ RAL  L+   +    T    A  +      +EVF+D Q V V PGTTVLQA  
Sbjct: 1   MLRIPVRRALVGLSKSPKGCVRTTATAASNL------IEVFVDGQSVMVEPGTTVLQACE 54

Query: 202 QVGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVAACAMPVMKGMRVKTNSDLTRKARE 381
           +VG++IPRFCYHERL+VAGNCRMCLVE+EK+PK VAACAMPVMKG  + TNS+ ++KARE
Sbjct: 55  KVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKARE 114

Query: 382 GVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDKSRFTDIHFSGKRAVEDKDVGPLIK 561
           GVMEFLL NHPLDCPICDQGGECDLQDQSM FG+D+SRF +    GKRAVEDK++GPL+K
Sbjct: 115 GVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE----GKRAVEDKNIGPLVK 170

Query: 562 TIMTRCIHCTRCIRFASEVA 621
           TIMTRCI CTRCIRFASE+A
Sbjct: 171 TIMTRCIQCTRCIRFASEIA 190


>BC030833-1|AAH30833.1|  727|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q
           reductas protein.
          Length = 727

 Score =  279 bits (683), Expect = 8e-75
 Identities = 134/200 (67%), Positives = 158/200 (79%), Gaps = 1/200 (0%)
 Frame = +1

Query: 25  MLRQPLSRALA-LTSPVRAAPLTARRFADQVQAQPEKVEVFIDDQPVHVVPGTTVLQAAA 201
           MLR P+ +AL  L+   +    T    A  +      +EVF+D Q V V PGTTVLQA  
Sbjct: 1   MLRIPVRKALVGLSKSPKGCVRTTATAASNL------IEVFVDGQSVMVEPGTTVLQACE 54

Query: 202 QVGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVAACAMPVMKGMRVKTNSDLTRKARE 381
           +VG++IPRFCYHERL+VAGNCRMCLVE+EK+PK VAACAMPVMKG  + TNS+ ++KARE
Sbjct: 55  KVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKARE 114

Query: 382 GVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDKSRFTDIHFSGKRAVEDKDVGPLIK 561
           GVMEFLL NHPLDCPICDQGGECDLQDQSM FG+D+SRF +    GKRAVEDK++GPL+K
Sbjct: 115 GVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE----GKRAVEDKNIGPLVK 170

Query: 562 TIMTRCIHCTRCIRFASEVA 621
           TIMTRCI CTRCIRFASE+A
Sbjct: 171 TIMTRCIQCTRCIRFASEIA 190


>BC022368-1|AAH22368.1|  727|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q
           reductas protein.
          Length = 727

 Score =  279 bits (683), Expect = 8e-75
 Identities = 134/200 (67%), Positives = 158/200 (79%), Gaps = 1/200 (0%)
 Frame = +1

Query: 25  MLRQPLSRALA-LTSPVRAAPLTARRFADQVQAQPEKVEVFIDDQPVHVVPGTTVLQAAA 201
           MLR P+ +AL  L+   +    T    A  +      +EVF+D Q V V PGTTVLQA  
Sbjct: 1   MLRIPVRKALVGLSKSPKGCVRTTATAASNL------IEVFVDGQSVMVEPGTTVLQACE 54

Query: 202 QVGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVAACAMPVMKGMRVKTNSDLTRKARE 381
           +VG++IPRFCYHERL+VAGNCRMCLVE+EK+PK VAACAMPVMKG  + TNS+ ++KARE
Sbjct: 55  KVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKARE 114

Query: 382 GVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDKSRFTDIHFSGKRAVEDKDVGPLIK 561
           GVMEFLL NHPLDCPICDQGGECDLQDQSM FG+D+SRF +    GKRAVEDK++GPL+K
Sbjct: 115 GVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE----GKRAVEDKNIGPLVK 170

Query: 562 TIMTRCIHCTRCIRFASEVA 621
           TIMTRCI CTRCIRFASE+A
Sbjct: 171 TIMTRCIQCTRCIRFASEIA 190


>AC007383-1|AAY15061.1|  727|Homo sapiens unknown protein.
          Length = 727

 Score =  279 bits (683), Expect = 8e-75
 Identities = 134/200 (67%), Positives = 158/200 (79%), Gaps = 1/200 (0%)
 Frame = +1

Query: 25  MLRQPLSRALA-LTSPVRAAPLTARRFADQVQAQPEKVEVFIDDQPVHVVPGTTVLQAAA 201
           MLR P+ +AL  L+   +    T    A  +      +EVF+D Q V V PGTTVLQA  
Sbjct: 1   MLRIPVRKALVGLSKSPKGCVRTTATAASNL------IEVFVDGQSVMVEPGTTVLQACE 54

Query: 202 QVGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVAACAMPVMKGMRVKTNSDLTRKARE 381
           +VG++IPRFCYHERL+VAGNCRMCLVE+EK+PK VAACAMPVMKG  + TNS+ ++KARE
Sbjct: 55  KVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKARE 114

Query: 382 GVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDKSRFTDIHFSGKRAVEDKDVGPLIK 561
           GVMEFLL NHPLDCPICDQGGECDLQDQSM FG+D+SRF +    GKRAVEDK++GPL+K
Sbjct: 115 GVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE----GKRAVEDKNIGPLVK 170

Query: 562 TIMTRCIHCTRCIRFASEVA 621
           TIMTRCI CTRCIRFASE+A
Sbjct: 171 TIMTRCIQCTRCIRFASEIA 190


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,288,006
Number of Sequences: 237096
Number of extensions: 1805834
Number of successful extensions: 5371
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5366
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)