Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11g11f
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006768-6|AAO25976.1| 305|Caenorhabditis elegans Hypothetical ... 285 2e-77
AC006768-5|AAO25977.1| 634|Caenorhabditis elegans Hypothetical ... 285 2e-77
AC006768-4|AAF60575.1| 729|Caenorhabditis elegans Hypothetical ... 285 2e-77
Z70682-9|CAA94587.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z70680-9|CAA94576.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.50
AC024882-13|AAF60926.1| 342|Caenorhabditis elegans Seven tm rec... 30 1.2
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z75535-1|CAA99827.1| 1127|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z69360-1|CAA93283.1| 390|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF000299-10|AAC47986.1| 338|Caenorhabditis elegans Seven tm rec... 28 6.2
Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical pr... 27 8.2
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 27 8.2
>AC006768-6|AAO25976.1| 305|Caenorhabditis elegans Hypothetical
protein Y45G12B.1b protein.
Length = 305
Score = 285 bits (698), Expect = 2e-77
Identities = 127/168 (75%), Positives = 147/168 (87%)
Frame = +1
Query: 118 AQPEKVEVFIDDQPVHVVPGTTVLQAAAQVGVEIPRFCYHERLAVAGNCRMCLVEVEKSP 297
A P+KVEVFIDD+ V V PG T+LQA A VGV+IPRFCYH+RL++AGNCRMCLVEVEKS
Sbjct: 27 APPKKVEVFIDDKKVLVDPGMTILQACALVGVDIPRFCYHDRLSIAGNCRMCLVEVEKSV 86
Query: 298 KPVAACAMPVMKGMRVKTNSDLTRKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAF 477
KPVA+CAMPVM GM+VKTNSD +KAREGVMEF+L NHPLDCPICDQGGECDLQDQ+M F
Sbjct: 87 KPVASCAMPVMNGMKVKTNSDFVKKAREGVMEFMLNNHPLDCPICDQGGECDLQDQAMNF 146
Query: 478 GSDKSRFTDIHFSGKRAVEDKDVGPLIKTIMTRCIHCTRCIRFASEVA 621
GSD+ R F GKRA+EDK++GPL+KT+MTRCI CTRC+RFA+EVA
Sbjct: 147 GSDRGRLQS-RFDGKRALEDKNIGPLVKTVMTRCIQCTRCVRFANEVA 193
>AC006768-5|AAO25977.1| 634|Caenorhabditis elegans Hypothetical
protein Y45G12B.1c protein.
Length = 634
Score = 285 bits (698), Expect = 2e-77
Identities = 127/168 (75%), Positives = 147/168 (87%)
Frame = +1
Query: 118 AQPEKVEVFIDDQPVHVVPGTTVLQAAAQVGVEIPRFCYHERLAVAGNCRMCLVEVEKSP 297
A P+KVEVFIDD+ V V PG T+LQA A VGV+IPRFCYH+RL++AGNCRMCLVEVEKS
Sbjct: 27 APPKKVEVFIDDKKVLVDPGMTILQACALVGVDIPRFCYHDRLSIAGNCRMCLVEVEKSV 86
Query: 298 KPVAACAMPVMKGMRVKTNSDLTRKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAF 477
KPVA+CAMPVM GM+VKTNSD +KAREGVMEF+L NHPLDCPICDQGGECDLQDQ+M F
Sbjct: 87 KPVASCAMPVMNGMKVKTNSDFVKKAREGVMEFMLNNHPLDCPICDQGGECDLQDQAMNF 146
Query: 478 GSDKSRFTDIHFSGKRAVEDKDVGPLIKTIMTRCIHCTRCIRFASEVA 621
GSD+ R F GKRA+EDK++GPL+KT+MTRCI CTRC+RFA+EVA
Sbjct: 147 GSDRGRLQS-RFDGKRALEDKNIGPLVKTVMTRCIQCTRCVRFANEVA 193
>AC006768-4|AAF60575.1| 729|Caenorhabditis elegans Hypothetical
protein Y45G12B.1a protein.
Length = 729
Score = 285 bits (698), Expect = 2e-77
Identities = 127/168 (75%), Positives = 147/168 (87%)
Frame = +1
Query: 118 AQPEKVEVFIDDQPVHVVPGTTVLQAAAQVGVEIPRFCYHERLAVAGNCRMCLVEVEKSP 297
A P+KVEVFIDD+ V V PG T+LQA A VGV+IPRFCYH+RL++AGNCRMCLVEVEKS
Sbjct: 27 APPKKVEVFIDDKKVLVDPGMTILQACALVGVDIPRFCYHDRLSIAGNCRMCLVEVEKSV 86
Query: 298 KPVAACAMPVMKGMRVKTNSDLTRKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAF 477
KPVA+CAMPVM GM+VKTNSD +KAREGVMEF+L NHPLDCPICDQGGECDLQDQ+M F
Sbjct: 87 KPVASCAMPVMNGMKVKTNSDFVKKAREGVMEFMLNNHPLDCPICDQGGECDLQDQAMNF 146
Query: 478 GSDKSRFTDIHFSGKRAVEDKDVGPLIKTIMTRCIHCTRCIRFASEVA 621
GSD+ R F GKRA+EDK++GPL+KT+MTRCI CTRC+RFA+EVA
Sbjct: 147 GSDRGRLQS-RFDGKRALEDKNIGPLVKTVMTRCIQCTRCVRFANEVA 193
>Z70682-9|CAA94587.2| 460|Caenorhabditis elegans Hypothetical
protein C25G4.1 protein.
Length = 460
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 220 PRFCYHERLAVAGNCRMCLVEVEKSPKPVAACAMPVMKGMR 342
P FCYH R A+ C+ C V E +P + PV++ R
Sbjct: 420 PTFCYHYRKAL---CKYCPVPPEIPSEPTSTTLAPVVRAKR 457
>Z70680-9|CAA94576.2| 460|Caenorhabditis elegans Hypothetical
protein C25G4.1 protein.
Length = 460
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 220 PRFCYHERLAVAGNCRMCLVEVEKSPKPVAACAMPVMKGMR 342
P FCYH R A+ C+ C V E +P + PV++ R
Sbjct: 420 PTFCYHYRKAL---CKYCPVPPEIPSEPTSTTLAPVVRAKR 457
>AC024882-13|AAF60926.1| 342|Caenorhabditis elegans Seven tm
receptor protein 164 protein.
Length = 342
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Frame = -1
Query: 366 CEVRIGLHTHTLHNRHCTCSNWFRRFLNFNKTHATIAGNC*AFMVAES--------RNFH 211
C+V +G H+ C ++ L A I C F V + R F
Sbjct: 58 CDVIVGPFIHSFQKSFCVLADRTNWLLGETTQFALICVLCGCFGVTITFFVIHFVFRYFA 117
Query: 210 SNLSGSLKNSCAWYYMNWLVVNKDFYFLW 124
S G L WY++ WL + F +W
Sbjct: 118 SERQGRLAYFHGWYFVVWLTIPVFFGIIW 146
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 67 PVRAAPLTARRFADQVQAQPEKVEVFIDDQPVHVVPGTT 183
PVR P RR ++ +P + E +D PV VP T
Sbjct: 118 PVRETPKPKRRGRPSIKQEPPEEEAATEDAPVPEVPEVT 156
>Z75535-1|CAA99827.1| 1127|Caenorhabditis elegans Hypothetical
protein F14B4.3 protein.
Length = 1127
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -1
Query: 510 MDISEATFVRSKGHGLILQITFTSLITYRTVKRVVY 403
M I++A++ R HG ++++ +L+T R K + Y
Sbjct: 736 MTINKASYQRGFAHGTVIKVERINLVTERERKTIFY 771
>Z69360-1|CAA93283.1| 390|Caenorhabditis elegans Hypothetical
protein F25H8.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +1
Query: 277 VEVEKSPKPVAACAMPVMKG-MRVKTNSDLTRKAREGVMEFLLVN--HPLDCPICDQGGE 447
+ ++++P P+A CA P + + +KT + + + V +VN P G
Sbjct: 15 ITIDRNPVPLAFCARPTLPAKIGMKTEDGIVDQLLDLVDPITVVNPTEIRQAPSLKSFG- 73
Query: 448 CDLQDQSMAFGSDKSRFTDIHFSGKRAVE-DKDVGPLIK 561
CD + + F D S F +I+ A++ D++ L+K
Sbjct: 74 CDTESE-FEFSGDDSDFENINDLRAGALDSDEEFDRLVK 111
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 192 LKNSCAWYYMNWLVVNKDFYFLWLSLHLISKTTSC*W 82
L S + + W V+N +FY LW +S +T+C W
Sbjct: 480 LSFSAGYAPLPW-VLNAEFYPLWARSTAVSVSTACNW 515
>AF000299-10|AAC47986.1| 338|Caenorhabditis elegans Seven tm
receptor protein 162 protein.
Length = 338
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 222 RNFHSNLSGSLKNSCAWYYMNWLVVNKDFYFLW 124
R F G+LK WY++ WL V FLW
Sbjct: 110 RYFAMQRKGNLKYFEGWYFLYWLSVPLISGFLW 142
>Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical
protein C17E4.1 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 280 EVEKSPKPVAACAMPVMKGMRVKTNSDLTRKARE 381
E K+P P AA PV++ + KTN T + +
Sbjct: 100 ETAKTPSPSAAPVSPVLEKSKTKTNQKSTTEIEQ 133
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 274 LVEVEKSPKPVAACAMPVMKGMRVKTNSDLTRKARE 381
++ +EK+P+P A A+P+ K R++ ++ E
Sbjct: 129 IINMEKNPEPYGAGALPLQKNTRLEKYDEVAAFVEE 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,776,808
Number of Sequences: 27780
Number of extensions: 276245
Number of successful extensions: 907
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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