Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g10f
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.8  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 213 FN*QCKKWVITHIPCSNLW 157
           FN    KW++ +  CS +W
Sbjct: 297 FNFNPHKWLLVNFDCSTMW 315


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 228 FSLKRVYTFVTKTVTSIVKFISNLLG 305
           F L  +YT  ++ ++ I K+I  + G
Sbjct: 89  FYLSYIYTTYSRKLSGIFKYIDQMAG 114


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 228 FSLKRVYTFVTKTVTSIVKFISNLLG 305
           F L  +YT  ++ ++ I K+I  + G
Sbjct: 45  FYLSYIYTTYSRKLSGIFKYIDQMAG 70


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 410 GKEKVCVISGDRVIHTERSTYRFKQKKHLYKR 315
           G + +C I GDR        Y  +  K  +KR
Sbjct: 81  GSKHLCSICGDRASGKHYGVYSCEGCKGFFKR 112


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 474 IYLSYNCVFC*TISMFCTFTKGV 542
           +++SYN   C T+S F  F + +
Sbjct: 191 MFVSYNIYVCQTVSNFEYFQRKI 213


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 474 IYLSYNCVFC*TISMFCTFTKGV 542
           +++SYN   C T+S F  F + +
Sbjct: 117 MFVSYNIYVCQTVSNFEYFQRKI 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,394
Number of Sequences: 336
Number of extensions: 2831
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)