Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11g06f
(565 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7Q0G8 Cluster: ENSANGP00000017893; n=1; Anopheles gamb... 198 7e-50
UniRef50_Q4RU23 Cluster: Chromosome 12 SCAF14996, whole genome s... 152 5e-36
UniRef50_P23378 Cluster: Glycine dehydrogenase [decarboxylating]... 148 8e-35
UniRef50_Q6PFN9 Cluster: Glycine dehydrogenase; n=2; Danio rerio... 144 1e-33
UniRef50_Q4AFZ8 Cluster: Glycine dehydrogenase; n=1; Chlorobium ... 131 1e-29
UniRef50_Q5R192 Cluster: Glycine dehydrogenase [decarboxylating]... 129 5e-29
UniRef50_Q9I137 Cluster: Glycine dehydrogenase [decarboxylating]... 123 3e-27
UniRef50_Q8PN59 Cluster: Glycine dehydrogenase [decarboxylating]... 123 3e-27
UniRef50_O80988 Cluster: Glycine dehydrogenase [decarboxylating]... 111 1e-23
UniRef50_Q83IA7 Cluster: Glycine dehydrogenase [decarboxylating]... 107 2e-22
UniRef50_A0CUD3 Cluster: Chromosome undetermined scaffold_28, wh... 105 5e-22
UniRef50_Q12CE3 Cluster: Glycine dehydrogenase; n=6; cellular or... 105 7e-22
UniRef50_Q6CR09 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 102 7e-21
UniRef50_Q7VET8 Cluster: Glycine dehydrogenase [decarboxylating]... 100 3e-20
UniRef50_Q2J5M7 Cluster: Glycine dehydrogenase; n=8; Bacteria|Re... 99 4e-20
UniRef50_Q7V9K4 Cluster: Glycine dehydrogenase [decarboxylating]... 98 1e-19
UniRef50_P49095 Cluster: Glycine dehydrogenase [decarboxylating]... 98 1e-19
UniRef50_Q7SG89 Cluster: Putative uncharacterized protein NCU024... 89 9e-17
UniRef50_Q6A9R8 Cluster: Glycine dehydrogenase [decarboxylating]... 88 1e-16
UniRef50_Q1F0R6 Cluster: Glycine dehydrogenase; n=3; Bacteria|Re... 67 2e-10
UniRef50_Q6ARJ7 Cluster: Probable glycine dehydrogenase, subunit... 66 5e-10
UniRef50_Q1AR87 Cluster: Glycine dehydrogenase; n=1; Rubrobacter... 64 2e-09
UniRef50_Q8RCW1 Cluster: Probable glycine dehydrogenase [decarbo... 64 3e-09
UniRef50_Q97C05 Cluster: Probable glycine dehydrogenase [decarbo... 63 5e-09
UniRef50_Q9WY56 Cluster: Probable glycine dehydrogenase [decarbo... 62 7e-09
UniRef50_A6DGQ8 Cluster: Glycine dehydrogenase; n=1; Lentisphaer... 60 5e-08
UniRef50_A5HZP1 Cluster: Glycine cleavage system P protein; n=4;... 58 1e-07
UniRef50_Q74G70 Cluster: Glycine cleavage system P protein, subu... 57 2e-07
UniRef50_Q7UNH0 Cluster: Glycine dehydrogenase subunit 1; n=2; P... 55 1e-06
UniRef50_Q186L1 Cluster: Aminomethyltransferase; n=20; Firmicute... 55 1e-06
UniRef50_Q9HPJ9 Cluster: Probable glycine dehydrogenase [decarbo... 55 1e-06
UniRef50_Q2IQD6 Cluster: Glycine dehydrogenase; n=1; Anaeromyxob... 54 2e-06
UniRef50_Q1FML8 Cluster: Glycine dehydrogenase; n=2; Clostridium... 54 3e-06
UniRef50_Q82WQ4 Cluster: Probable glycine dehydrogenase [decarbo... 53 4e-06
UniRef50_Q5SKW8 Cluster: Glycine dehydrogenase (Decarboxylating)... 53 5e-06
UniRef50_Q8TZJ3 Cluster: Probable glycine dehydrogenase [decarbo... 52 9e-06
UniRef50_A4YHB7 Cluster: Glycine dehydrogenase; n=1; Metallospha... 52 1e-05
UniRef50_Q9A353 Cluster: Probable glycine dehydrogenase [decarbo... 52 1e-05
UniRef50_Q0EW11 Cluster: Glycine cleavage system P protein, subu... 51 2e-05
UniRef50_Q73M84 Cluster: Glycine cleavage system P protein, subu... 50 3e-05
UniRef50_Q3APU1 Cluster: Glycine dehydrogenase subunit 1; n=8; C... 50 5e-05
UniRef50_O67193 Cluster: Probable glycine dehydrogenase [decarbo... 49 9e-05
UniRef50_Q1INU0 Cluster: Glycine dehydrogenase; n=2; Acidobacter... 48 2e-04
UniRef50_Q6MEJ2 Cluster: Probable glycine dehydrogenase P protei... 47 3e-04
UniRef50_A3EPS9 Cluster: Putative glycine dehydrogenase, subunit... 46 6e-04
UniRef50_Q9YA15 Cluster: Probable glycine dehydrogenase [decarbo... 46 8e-04
UniRef50_Q8KC05 Cluster: Probable glycine dehydrogenase [decarbo... 43 0.004
UniRef50_Q2AE33 Cluster: Glycine cleavage system P-protein; n=1;... 42 0.013
UniRef50_P48906 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 2.6
UniRef50_A4DH38 Cluster: Integrase; n=3; Listeria|Rep: Integrase... 33 3.5
UniRef50_Q9PH65 Cluster: Outer membrane usher protein; n=5; Xant... 33 4.6
UniRef50_P36421 Cluster: Tyrosyl-tRNA synthetase, cytoplasmic; n... 32 8.1
UniRef50_Q9M0X9 Cluster: 4-coumarate--CoA ligase-like 7; n=1; Ar... 32 8.1
>UniRef50_Q7Q0G8 Cluster: ENSANGP00000017893; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017893 - Anopheles gambiae
str. PEST
Length = 209
Score = 198 bits (483), Expect = 7e-50
Identities = 82/124 (66%), Positives = 109/124 (87%)
Frame = +3
Query: 192 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISE 371
+ LFP++ DF SRHIGPR D+VTML+ +G+KSLD+L+ AVP I+F+ ++NI +P++E
Sbjct: 43 EELFPNKPDFASRHIGPRKTDVVTMLNSIGFKSLDELSEKAVPDAIKFKRILNIEDPLNE 102
Query: 372 YDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRL 551
++LIER++ I+++NEIWRSYIGMGYHNC VPH I+RN+FENPGWTTQYTPYQPE++QGRL
Sbjct: 103 HELIERIQRISDQNEIWRSYIGMGYHNCLVPHPILRNVFENPGWTTQYTPYQPEISQGRL 162
Query: 552 ESLL 563
ESLL
Sbjct: 163 ESLL 166
>UniRef50_Q4RU23 Cluster: Chromosome 12 SCAF14996, whole genome
shotgun sequence; n=7; Eukaryota|Rep: Chromosome 12
SCAF14996, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1090
Score = 152 bits (369), Expect = 5e-36
Identities = 69/137 (50%), Positives = 95/137 (69%), Gaps = 1/137 (0%)
Frame = +3
Query: 156 AIRHVTTQSTRS-DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQ 332
A+R S+R + + P DF RHIGP +++ MLD+LG +S+DQL + VP I+
Sbjct: 57 ALRTSAAISSRQIERILPRHDDFTERHIGPGEREKREMLDVLGLESVDQLIENTVPSSIR 116
Query: 333 FQGLMNISEPISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQ 512
+ M + +P+ E +++E ++ IA N++WRSYIGMGY+NC VP I RN+ EN GW TQ
Sbjct: 117 MRRSMKMDDPVCENEILESLQKIASMNKVWRSYIGMGYYNCSVPPPIQRNLLENSGWVTQ 176
Query: 513 YTPYQPEVAQGRLESLL 563
YTPYQPEV+QGRLESLL
Sbjct: 177 YTPYQPEVSQGRLESLL 193
>UniRef50_P23378 Cluster: Glycine dehydrogenase [decarboxylating],
mitochondrial precursor; n=32; cellular organisms|Rep:
Glycine dehydrogenase [decarboxylating], mitochondrial
precursor - Homo sapiens (Human)
Length = 1020
Score = 148 bits (359), Expect = 8e-35
Identities = 65/124 (52%), Positives = 85/124 (68%)
Frame = +3
Query: 192 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISE 371
+ L P DF RHIGP D+D ML LG S+D+L VP I+ + + + +P+ E
Sbjct: 54 ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCE 113
Query: 372 YDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRL 551
+++ + I+ KN+IWRSYIGMGY+NC VP I+RN+ EN GW TQYTPYQPEV+QGRL
Sbjct: 114 NEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRL 173
Query: 552 ESLL 563
ESLL
Sbjct: 174 ESLL 177
>UniRef50_Q6PFN9 Cluster: Glycine dehydrogenase; n=2; Danio
rerio|Rep: Glycine dehydrogenase - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 983
Score = 144 bits (350), Expect = 1e-33
Identities = 62/128 (48%), Positives = 89/128 (69%)
Frame = +3
Query: 180 STRSDTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISE 359
S + + + P +F RHIGP D++ ML+ LG +S+ QL + +P I+ + + +
Sbjct: 57 SRKIERILPRHDEFSERHIGPGDKEKREMLNTLGVESVSQLIENTIPPSIRLGRSLKMDD 116
Query: 360 PISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVA 539
P+ E ++++ ++ IA KN++WRSYIGMGY+NC VP I RN+ EN GW TQYTPYQPEV+
Sbjct: 117 PVCENEILDSLQKIASKNKMWRSYIGMGYYNCSVPPVIQRNLLENSGWVTQYTPYQPEVS 176
Query: 540 QGRLESLL 563
QGRLESLL
Sbjct: 177 QGRLESLL 184
>UniRef50_Q4AFZ8 Cluster: Glycine dehydrogenase; n=1; Chlorobium
phaeobacteroides BS1|Rep: Glycine dehydrogenase -
Chlorobium phaeobacteroides BS1
Length = 534
Score = 131 bits (316), Expect = 1e-29
Identities = 61/116 (52%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +3
Query: 219 FPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKI-QFQGLMNISEPISEYDLIERVR 395
F RH GPR++D+ TML+ LG KS+++L VP I +G+ +I +SEYD + VR
Sbjct: 6 FIKRHNGPREEDVSTMLNKLGLKSVNELIEKTVPSNIFNPEGIGDIPG-MSEYDYLNHVR 64
Query: 396 LIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLL 563
+++KN+I++SYIG+GY+N VP I+RN+FENPGW T YTPYQ E++QGRLE+LL
Sbjct: 65 NLSKKNKIFKSYIGLGYYNTIVPPVILRNIFENPGWYTSYTPYQAEISQGRLEALL 120
>UniRef50_Q5R192 Cluster: Glycine dehydrogenase [decarboxylating];
n=42; cellular organisms|Rep: Glycine dehydrogenase
[decarboxylating] - Idiomarina loihiensis
Length = 962
Score = 129 bits (311), Expect = 5e-29
Identities = 61/116 (52%), Positives = 80/116 (68%)
Frame = +3
Query: 216 DFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVR 395
+F SRHIGP + ML LG SL+ LT D VP I + + EP +E + + R++
Sbjct: 14 EFISRHIGPSADEQKAMLAELGVDSLEALTKDTVPGAILREPFLQTGEPQTEREALARLK 73
Query: 396 LIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLL 563
IA+KN+I SYIGMGY++ VP+ I+RN+ ENPGW T YTPYQPE+AQGRLE+LL
Sbjct: 74 NIAKKNQICTSYIGMGYYDTVVPNVILRNVLENPGWYTAYTPYQPEIAQGRLEALL 129
>UniRef50_Q9I137 Cluster: Glycine dehydrogenase [decarboxylating] 1;
n=61; cellular organisms|Rep: Glycine dehydrogenase
[decarboxylating] 1 - Pseudomonas aeruginosa
Length = 959
Score = 123 bits (297), Expect = 3e-27
Identities = 54/116 (46%), Positives = 76/116 (65%)
Frame = +3
Query: 216 DFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVR 395
+F +RHIGPR D ML LGY SLD L + +P I+ ++++ + E + + ++
Sbjct: 17 EFIARHIGPRAADTQAMLQRLGYDSLDTLIGNVIPDSIKGSSVLDLPAGMGEAEALASLK 76
Query: 396 LIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLL 563
IA +N RS+IG GY+NC P I+RN+ ENP W T YTPYQPE++QGRLE+LL
Sbjct: 77 AIAARNRALRSFIGQGYYNCHTPAPILRNLLENPAWYTAYTPYQPEISQGRLEALL 132
>UniRef50_Q8PN59 Cluster: Glycine dehydrogenase [decarboxylating];
n=13; cellular organisms|Rep: Glycine dehydrogenase
[decarboxylating] - Xanthomonas axonopodis pv. citri
Length = 977
Score = 123 bits (296), Expect = 3e-27
Identities = 53/115 (46%), Positives = 78/115 (67%)
Frame = +3
Query: 219 FPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRL 398
F RHIGP D +I MLD++G+ SLD LT+ VP I+ + + E I+E + + ++R
Sbjct: 17 FVERHIGPNDAEIAQMLDVVGHASLDALTDAIVPGNIKSPAPLALPEAITEEEALAKIRA 76
Query: 399 IAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLL 563
IA KN++ R++IG GY+ P I+RN+ ENP W T YTPYQ E++QGR+E+L+
Sbjct: 77 IASKNQVQRNFIGQGYYGTHTPKVILRNILENPAWYTAYTPYQAEISQGRMEALI 131
>UniRef50_O80988 Cluster: Glycine dehydrogenase [decarboxylating],
mitochondrial precursor; n=261; cellular organisms|Rep:
Glycine dehydrogenase [decarboxylating], mitochondrial
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 1044
Score = 111 bits (267), Expect = 1e-23
Identities = 56/133 (42%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +3
Query: 174 TQSTRSDTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMN- 350
T+S D L P FP RH + M + G+ +L+ L + VPK I+ +
Sbjct: 70 TRSISVDALKPSDT-FPRRHNSATPDEQAQMANYCGFDNLNTLIDSTVPKSIRLDSMKFS 128
Query: 351 --ISEPISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPY 524
E ++E +IE + +A KN++++S+IGMGY+N VP I+RN+ ENP W TQYTPY
Sbjct: 129 GIFDEGLTESQMIEHMSDLASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPY 188
Query: 525 QPEVAQGRLESLL 563
Q E++QGRLESLL
Sbjct: 189 QAEISQGRLESLL 201
>UniRef50_Q83IA7 Cluster: Glycine dehydrogenase [decarboxylating];
n=2; Tropheryma whipplei|Rep: Glycine dehydrogenase
[decarboxylating] - Tropheryma whipplei (strain TW08/27)
(Whipple's bacillus)
Length = 968
Score = 107 bits (256), Expect = 2e-22
Identities = 51/112 (45%), Positives = 68/112 (60%)
Frame = +3
Query: 228 RHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAE 407
RHIGP ++I ML LGYKSLD L + A+P +Q + I E + ++ A+
Sbjct: 4 RHIGPSQEEIDHMLGFLGYKSLDDLMHAALPNGVQSPPDIKIPSH-DELTCLTQLAAFAK 62
Query: 408 KNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLL 563
N I S +G G++NC P I RN+ ENP W T YTPYQPE++QGRLE L+
Sbjct: 63 MNRIKTSMLGQGFYNCITPAVIRRNILENPSWYTSYTPYQPEISQGRLEMLI 114
>UniRef50_A0CUD3 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 972
Score = 105 bits (253), Expect = 5e-22
Identities = 48/116 (41%), Positives = 76/116 (65%), Gaps = 4/116 (3%)
Frame = +3
Query: 228 RHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQ----FQGLMNISEPISEYDLIERVR 395
R IG Q + ML + KSLD+L + +PK+I+ FQ N + I E +++ ++
Sbjct: 40 RFIGSESQQVNEMLKAVEAKSLDELVDKIIPKEIRSEAAFQSPDNFPDAIPESAMVQHLQ 99
Query: 396 LIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLL 563
+A KN+++++YIG G++ P+ I+RN+ E+PGW T YTPYQ E++QGRLE+LL
Sbjct: 100 SLANKNKLYKNYIGQGFYGTHTPYVILRNVLEDPGWYTSYTPYQAEISQGRLEALL 155
>UniRef50_Q12CE3 Cluster: Glycine dehydrogenase; n=6; cellular
organisms|Rep: Glycine dehydrogenase - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 1014
Score = 105 bits (252), Expect = 7e-22
Identities = 47/116 (40%), Positives = 74/116 (63%)
Frame = +3
Query: 216 DFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVR 395
+F RHIG + D V ML ++G S L + VP+ I M I P++E +++++
Sbjct: 36 EFIPRHIGIDEADEVHMLSVVGSASRRDLIDGIVPRSIARTSTMAIPAPVTEAAALKQLK 95
Query: 396 LIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLL 563
IA KN++++++IG GY+ P I+RN+ ENP W T YTPYQ E++QGR+E+L+
Sbjct: 96 AIAAKNQVFKNFIGQGYYGTYTPGVILRNILENPAWYTAYTPYQAEISQGRMEALI 151
>UniRef50_Q6CR09 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome D of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 1028
Score = 102 bits (244), Expect = 7e-21
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Frame = +3
Query: 219 FPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEP---ISEYDLIER 389
F RH+GP ++ ML LGY LDQ N VP+ I + + ++ P +E +++
Sbjct: 63 FQRRHLGPSPSNVDQMLKQLGYTDLDQFINGVVPENILVKRPLELNSPENGFTEQQMLKH 122
Query: 390 VRLIAEKNEIW-RSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLL 563
+ +A KN R++IG GY+ +P I RN+ E P W T YTPYQPE++QGRLESLL
Sbjct: 123 LEELANKNNHKVRNFIGKGYYGTVLPPVIQRNLLECPEWYTSYTPYQPEISQGRLESLL 181
>UniRef50_Q7VET8 Cluster: Glycine dehydrogenase [decarboxylating];
n=43; Bacteria|Rep: Glycine dehydrogenase
[decarboxylating] - Mycobacterium bovis
Length = 941
Score = 100 bits (239), Expect = 3e-20
Identities = 53/127 (41%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Frame = +3
Query: 207 DRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKI--------QFQGLMNISEP 362
D F RHIG Q + TML ++G SLD L AVP I GL ++
Sbjct: 3 DHSTFADRHIGLDSQAVATMLAVIGVDSLDDLAVKAVPAGILDTLTDTGAAPGLDSLPPA 62
Query: 363 ISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQ 542
SE + + +R +A+ N + S IG GY++ P ++RN+ ENP W T YTPYQPE++Q
Sbjct: 63 ASEAEALAELRALADANTVAVSMIGQGYYDTHTPPVLLRNIIENPAWYTAYTPYQPEISQ 122
Query: 543 GRLESLL 563
GRLE+LL
Sbjct: 123 GRLEALL 129
>UniRef50_Q2J5M7 Cluster: Glycine dehydrogenase; n=8; Bacteria|Rep:
Glycine dehydrogenase - Frankia sp. (strain CcI3)
Length = 1072
Score = 99 bits (238), Expect = 4e-20
Identities = 51/115 (44%), Positives = 68/115 (59%)
Frame = +3
Query: 219 FPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRL 398
F RHIGP MLD L +SL LT+ AVP I+ L ++ +SE ++ +R
Sbjct: 68 FADRHIGPDPSSQREMLDALRVESLAALTDAAVPASIRDHDL-DLPAALSEPAVLAALRA 126
Query: 399 IAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLL 563
+N S IG+G+H +P I RN+ ENP W T YTPYQPE++QGRLE+LL
Sbjct: 127 FGSRNRPVSSMIGLGFHPAVMPGVIQRNVLENPAWYTAYTPYQPEISQGRLEALL 181
>UniRef50_Q7V9K4 Cluster: Glycine dehydrogenase [decarboxylating];
n=35; cellular organisms|Rep: Glycine dehydrogenase
[decarboxylating] - Prochlorococcus marinus
Length = 964
Score = 98.3 bits (234), Expect = 1e-19
Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = +3
Query: 219 FPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMN--ISEPISEYDLIERV 392
F RH+G ++ V +L+ LG+ ++ + VP++I + + + ++E + +E +
Sbjct: 9 FSDRHLGLIEEAQVEILNALGHADINDFISSVVPEEILDAQPPDELLPKALNEIEALEEL 68
Query: 393 RLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
R IA+KN+I RS IG+GY+ P I R++FENP W T YTPYQ E+AQGRLE+L
Sbjct: 69 RSIAKKNQIKRSLIGLGYYGTYTPAVIQRHVFENPAWYTSYTPYQAEIAQGRLEAL 124
>UniRef50_P49095 Cluster: Glycine dehydrogenase [decarboxylating],
mitochondrial precursor; n=5; Ascomycota|Rep: Glycine
dehydrogenase [decarboxylating], mitochondrial precursor
- Saccharomyces cerevisiae (Baker's yeast)
Length = 1034
Score = 97.9 bits (233), Expect = 1e-19
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Frame = +3
Query: 219 FPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEP---ISEYDLIER 389
F RH+GP D+ ML +GY L+ + VP I + + + P E ++++
Sbjct: 67 FARRHLGPSPSDVKKMLKTMGYSDLNAFIEELVPPNILKRRPLKLEAPSKGFCEQEMLQH 126
Query: 390 VRLIAEKNEIW-RSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLL 563
+ IA KN +++IG GY+ +P I RN+ E+P W T YTPYQPE++QGRLE+LL
Sbjct: 127 LEKIANKNHYKVKNFIGKGYYGTILPPVIQRNLLESPEWYTSYTPYQPEISQGRLEALL 185
>UniRef50_Q7SG89 Cluster: Putative uncharacterized protein
NCU02475.1; n=3; Dikarya|Rep: Putative uncharacterized
protein NCU02475.1 - Neurospora crassa
Length = 1100
Score = 88.6 bits (210), Expect = 9e-17
Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 17/139 (12%)
Frame = +3
Query: 198 LFPDRVDFPSRHIGPRDQDIVTMLDLLG--YKSLDQLTNDAVPK------------KIQF 335
LFP R DF SRHIGP + I ML +L +SLDQ + +P +++F
Sbjct: 77 LFPVREDFASRHIGPDNSSIQEMLGVLDPPVESLDQFVQEVIPADILSKRELFPQTRVRF 136
Query: 336 QGLMNIS--EPISEYDLIERVRLIAEKNE-IWRSYIGMGYHNCCVPHAIMRNMFENPGWT 506
+ E+++++ +A N ++ IG GY+ P I RN+ E+P W
Sbjct: 137 HATKKYPTRQGHQEWEIMKIAESMASSNRHSVKAQIGAGYYGTLTPEVIKRNVLESPAWY 196
Query: 507 TQYTPYQPEVAQGRLESLL 563
T YTPYQPE++QGRLESLL
Sbjct: 197 TSYTPYQPEISQGRLESLL 215
>UniRef50_Q6A9R8 Cluster: Glycine dehydrogenase [decarboxylating];
n=52; Bacteria|Rep: Glycine dehydrogenase
[decarboxylating] - Propionibacterium acnes
Length = 994
Score = 88.2 bits (209), Expect = 1e-16
Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Frame = +3
Query: 219 FPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKI--QFQGLMNI---SEPISEYDLI 383
F SRH+G + D+ + + +G S +Q+ DA+P + +G ++ S P + +
Sbjct: 17 FSSRHVGSVEDDLRYIAETIGVTSPEQIIRDAIPASVLDSNEGDSSVRTPSFPPAADETT 76
Query: 384 ERVRL--IAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLES 557
R L IA N + R+ IG GY+ P I RN+ ENP W T YTPYQPE++QGRLE
Sbjct: 77 ARAELVEIASGNRVTRALIGRGYYGTLTPPVIRRNILENPSWYTAYTPYQPEISQGRLEM 136
Query: 558 L 560
L
Sbjct: 137 L 137
>UniRef50_Q1F0R6 Cluster: Glycine dehydrogenase; n=3; Bacteria|Rep:
Glycine dehydrogenase - Clostridium oremlandii OhILAs
Length = 446
Score = 67.3 bits (157), Expect = 2e-10
Identities = 34/114 (29%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Frame = +3
Query: 228 RHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAE 407
R+I D D ML+++G +L+ L ND +PK++Q +++ P SE +++ ++ ++
Sbjct: 3 RYIPNTDADTKRMLEVIGVNNLEDLFND-IPKELQLGRELDLEGPYSEMEILRHMKELSG 61
Query: 408 KN---EIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
KN + ++G G ++ +P +I++++ + T YTPYQPE++QG L+++
Sbjct: 62 KNTNIDELTCFLGAGAYDHYIP-SIIKHLAGRSEFFTAYTPYQPEISQGTLQAI 114
>UniRef50_Q6ARJ7 Cluster: Probable glycine dehydrogenase, subunit 1;
n=1; Desulfotalea psychrophila|Rep: Probable glycine
dehydrogenase, subunit 1 - Desulfotalea psychrophila
Length = 450
Score = 66.1 bits (154), Expect = 5e-10
Identities = 37/114 (32%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Frame = +3
Query: 228 RHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAE 407
R++ +++I ML+++G +SLD L + +VP + ++QG + I ++E+ L + +
Sbjct: 2 RYLPHTEEEIQEMLEVVGKESLDDLFS-SVPAECRYQGDIPIPAALTEWQLKDHFAALMS 60
Query: 408 KNEIWRSY---IGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
KN + + + IG G ++ VP I+ ++ + T YTPYQPEVAQG L+ +
Sbjct: 61 KNRVNQEHKVLIGAGSYDHYVPE-ILPSLMSRSEFLTAYTPYQPEVAQGTLQGI 113
>UniRef50_Q1AR87 Cluster: Glycine dehydrogenase; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: Glycine dehydrogenase -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 429
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +3
Query: 246 DQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNEIWR 425
+ DI MLD +G S+D+L D P+ F+G + + +SEY+ + V +A +N
Sbjct: 9 EADIREMLDAIGVGSVDELFEDVSPR---FEGELGLPPALSEYEALREVERLAARNRAGL 65
Query: 426 S-YIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
++G G ++ P A+ + + T YTPYQPEV+QG L+++
Sbjct: 66 PVFLGAGAYDRITPAAVGA-IISRGEFMTSYTPYQPEVSQGHLQAI 110
>UniRef50_Q8RCW1 Cluster: Probable glycine dehydrogenase
[decarboxylating] subunit 1; n=53; Firmicutes|Rep:
Probable glycine dehydrogenase [decarboxylating] subunit
1 - Thermoanaerobacter tengcongensis
Length = 449
Score = 63.7 bits (148), Expect = 3e-09
Identities = 34/119 (28%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Frame = +3
Query: 213 VDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERV 392
V FP I D+ ML +G S+++L + +PK+++ +N+ +P+SE ++ +R+
Sbjct: 3 VMFPYLPISSEDEK--EMLKTIGKNSIEELF-EVIPKEVRLNRPLNLGKPMSELEVRKRL 59
Query: 393 RLIAEKNEIWR---SYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
A++N+ S++G G ++ +P ++++++ + T YTPYQPE++QG L+++
Sbjct: 60 GSYADENKNLSQLVSFLGAGVYDHYIP-SVVKHIISRSEFYTAYTPYQPEISQGTLQAI 117
>UniRef50_Q97C05 Cluster: Probable glycine dehydrogenase
[decarboxylating] subunit 1; n=4; Thermoplasmatales|Rep:
Probable glycine dehydrogenase [decarboxylating] subunit
1 - Thermoplasma volcanium
Length = 434
Score = 62.9 bits (146), Expect = 5e-09
Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 252 DIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNEI-WRS 428
+I +MLD LG KS ++L +D +P ++ + + I P+ E+ ++ER R A N +
Sbjct: 3 EISSMLDYLGIKSTEELFSD-IPLSVRKKEI-GIGSPLDEHLVLERARKYASLNSTEMLN 60
Query: 429 YIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
++G G ++ +P A+ + + YTPYQPEV+QG L+S+
Sbjct: 61 FLGNGIYDRVIPEAV-NYIISKSEFLDSYTPYQPEVSQGMLQSI 103
>UniRef50_Q9WY56 Cluster: Probable glycine dehydrogenase
[decarboxylating] subunit 1; n=5; Thermotogaceae|Rep:
Probable glycine dehydrogenase [decarboxylating] subunit
1 - Thermotoga maritima
Length = 437
Score = 62.5 bits (145), Expect = 7e-09
Identities = 35/113 (30%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Frame = +3
Query: 231 HIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEK 410
+I D+D+ MLD +G S+++L + ++P + + +NI E E+ + ++++ I+E
Sbjct: 5 YIPHTDEDVRAMLDFIGVSSIEELFS-SIP--VSARSSLNIPESRDEFSVFKQLKEISEM 61
Query: 411 N---EIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
N E + ++G G + VP ++ ++ P + T YTPYQ EV+QG L++L
Sbjct: 62 NNSLEDYAVFLGAGVYKRYVP-TVVYDLAMKPDFLTAYTPYQAEVSQGTLQAL 113
>UniRef50_A6DGQ8 Cluster: Glycine dehydrogenase; n=1; Lentisphaera
araneosa HTCC2155|Rep: Glycine dehydrogenase -
Lentisphaera araneosa HTCC2155
Length = 993
Score = 59.7 bits (138), Expect = 5e-08
Identities = 38/107 (35%), Positives = 56/107 (52%)
Frame = +3
Query: 231 HIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEK 410
+I D DI ML+ LG ++ + L + +PK ++F +NI + S ++I + IA K
Sbjct: 16 YIPASDADIQAMLEHLGCQNFEDLYSH-IPKDVRFDSDINIPKSKSSDEIISEMSAIANK 74
Query: 411 NEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRL 551
N I S+IG G V + + TT YTPYQPE +QG L
Sbjct: 75 NNIRTSFIGDGLKAYKVMD-VAGPVLNIRSLTTSYTPYQPERSQGTL 120
>UniRef50_A5HZP1 Cluster: Glycine cleavage system P protein; n=4;
Clostridium botulinum|Rep: Glycine cleavage system P
protein - Clostridium botulinum A str. ATCC 3502
Length = 446
Score = 58.0 bits (134), Expect = 1e-07
Identities = 31/113 (27%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Frame = +3
Query: 231 HIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEK 410
+I +++ +LD L KS+ +L +D +P ++ +++ +SE ++ +R++ +A K
Sbjct: 4 YIPNTEKETKEILDFLSIKSVYELFSD-IPDNLKLNRELDLESSLSELEVEKRLKALALK 62
Query: 411 N---EIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
N E ++G G ++ +P ++++++ + T YTPYQPEV+QG L+++
Sbjct: 63 NKSMEDMTCFLGAGIYDHYIP-SVIKHITGRSEFYTAYTPYQPEVSQGTLQAI 114
>UniRef50_Q74G70 Cluster: Glycine cleavage system P protein, subunit
1; n=10; Deltaproteobacteria|Rep: Glycine cleavage
system P protein, subunit 1 - Geobacter sulfurreducens
Length = 448
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/105 (28%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +3
Query: 249 QDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKN-EIWR 425
+++ MLD +G +D L P ++ + ++ +SE++++ R++ +A +N +
Sbjct: 12 EEVRRMLDAVGVADIDDLFRPISPA-LRAKSF-DLPPGMSEFEMLHRLQTLAGRNAQGLV 69
Query: 426 SYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
++G G+H+ +P A++ ++ P + T YTPYQPE +QG L++L
Sbjct: 70 HFVGGGFHDHLIP-AVVDHLASRPEFYTAYTPYQPECSQGTLQAL 113
>UniRef50_Q7UNH0 Cluster: Glycine dehydrogenase subunit 1; n=2;
Planctomycetaceae|Rep: Glycine dehydrogenase subunit 1 -
Rhodopirellula baltica
Length = 481
Score = 54.8 bits (126), Expect = 1e-06
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Frame = +3
Query: 204 PDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLI 383
P +VD S ++ D+D ML +G S+D++ ND VP+ ++ + +++ +E L
Sbjct: 9 PKQVDRMS-YLFHTDEDRREMLKSIGANSIDEIINDQVPEAVRMKRPLDLPPACNELALT 67
Query: 384 ERVRLIAEKNEIWRS---YIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLE 554
+ +A +N S ++G G ++ +P A+ + + T YTPYQ EV+QG L+
Sbjct: 68 AEMTRLAARNASADSHVCFLGGGAYDHFIPAAV-DEIASRGEYYTSYTPYQAEVSQGNLQ 126
>UniRef50_Q186L1 Cluster: Aminomethyltransferase; n=20;
Firmicutes|Rep: Aminomethyltransferase - Clostridium
difficile (strain 630)
Length = 824
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/111 (27%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Frame = +3
Query: 231 HIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEK 410
+I +D ML ++G S+D+L +D +P++++ + +N+ SE ++ + V+ ++E+
Sbjct: 380 YIPATSEDKSKMLKVVGLNSVDELFSD-IPEEVKLKRDLNLEIGKSELEVSKIVKRLSEE 438
Query: 411 N---EIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLE 554
N E ++G G ++ +P +I++++ + T YTPYQ E++QG L+
Sbjct: 439 NLSLEDLTCFLGAGAYDHYIP-SIIKHITSRSEFYTAYTPYQAEISQGTLQ 488
>UniRef50_Q9HPJ9 Cluster: Probable glycine dehydrogenase
[decarboxylating] subunit 1; n=4; Halobacteriaceae|Rep:
Probable glycine dehydrogenase [decarboxylating] subunit
1 - Halobacterium salinarium (Halobacterium halobium)
Length = 441
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/112 (29%), Positives = 57/112 (50%)
Frame = +3
Query: 225 SRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIA 404
S + P + D MLD +G +D+L + +P ++ F G I SE + VR
Sbjct: 4 SPYASPSEADTDAMLDAVGVDRVDELFD--IPPEVSFDGEFGIDAK-SEQAALRGVRRRL 60
Query: 405 EKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
N+ ++G G++ VP +++ ++ + + T YT YQPE+ QG L+ L
Sbjct: 61 SDNDDLTEFLGRGHYEHYVP-SLVDSVSQRSEFITSYTQYQPEITQGFLQVL 111
>UniRef50_Q2IQD6 Cluster: Glycine dehydrogenase; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Glycine
dehydrogenase - Anaeromyxobacter dehalogenans (strain
2CP-C)
Length = 445
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +3
Query: 252 DIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNEIWRS- 428
D+ MLD++G + +D L ++P+ ++ +++ E L +R +A +NE
Sbjct: 10 DVRAMLDVVGAERVDDLFR-SIPQALRLDRPLDLPPAADEIALFSELRRLAARNETAHPP 68
Query: 429 YIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
++G G + VP + + + +T YTPYQPE++QG L++L
Sbjct: 69 FVGAGCYPHHVPPVVDQLLLRGEFFTA-YTPYQPEISQGTLQAL 111
>UniRef50_Q1FML8 Cluster: Glycine dehydrogenase; n=2;
Clostridium|Rep: Glycine dehydrogenase - Clostridium
phytofermentans ISDg
Length = 439
Score = 53.6 bits (123), Expect = 3e-06
Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +3
Query: 246 DQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNEIWR 425
D+D ML +G S++ L +P+ ++ +N+ +SE ++ ++ IA KN ++
Sbjct: 9 DRDKKEMLSAIGIDSIEDLFGQ-LPQDVKLMDGLNLPSGMSEMEVCRKMEGIAAKNTVFP 67
Query: 426 S-YIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
+ G G + +P A+++++ T YTPYQ E++QG L+S+
Sbjct: 68 VIFRGAGAYRHYIP-AVVKSVLSKETLYTAYTPYQAEISQGILQSI 112
>UniRef50_Q82WQ4 Cluster: Probable glycine dehydrogenase
[decarboxylating] subunit 1; n=31; Proteobacteria|Rep:
Probable glycine dehydrogenase [decarboxylating] subunit
1 - Nitrosomonas europaea
Length = 453
Score = 53.2 bits (122), Expect = 4e-06
Identities = 29/105 (27%), Positives = 59/105 (56%)
Frame = +3
Query: 246 DQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNEIWR 425
++D+ ML +G +S+D+L D +P +++ L + +SE ++ + A+++ +
Sbjct: 8 EEDVAEMLTSIGARSIDELF-DEIPAELKTGKLTQVPPGLSEMEISRLMYERAQQDGFYL 66
Query: 426 SYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
S+IG G + +P A+ + +++ YTPYQ E +QG L+ L
Sbjct: 67 SFIGAGAYEHHIPAAVWQITTRGEFYSS-YTPYQAEASQGTLQLL 110
>UniRef50_Q5SKW8 Cluster: Glycine dehydrogenase (Decarboxylating)
subunit 1; n=3; Thermus thermophilus|Rep: Glycine
dehydrogenase (Decarboxylating) subunit 1 - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 438
Score = 52.8 bits (121), Expect = 5e-06
Identities = 33/105 (31%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +3
Query: 246 DQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKN-EIW 422
+++I ML +G SL+ L +PK+I +++ EP+ E+ ++E +R +A +N
Sbjct: 8 EEEIREMLRRVGAASLEDLFAH-LPKEI-LSPPIDLPEPLPEWKVLEELRRLAAQNLPAH 65
Query: 423 RSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLES 557
++++G G + VP +++ + + T YTPYQPEV+QG L++
Sbjct: 66 KAFLGGGVRSHHVP-PVVQALAARGEFLTAYTPYQPEVSQGVLQA 109
>UniRef50_Q8TZJ3 Cluster: Probable glycine dehydrogenase
[decarboxylating] subunit 1; n=1; Pyrococcus
furiosus|Rep: Probable glycine dehydrogenase
[decarboxylating] subunit 1 - Pyrococcus furiosus
Length = 448
Score = 52.0 bits (119), Expect = 9e-06
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Frame = +3
Query: 228 RHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAE 407
+H P ML +G+ S+++L D VP+ F N+ E SEY++ + I
Sbjct: 3 KHYIPNSAHKEEMLKEIGFSSIEELFAD-VPEG--FIREFNVPEGKSEYEVFMEMNEILS 59
Query: 408 KNEI---WRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
KN+ +++G G + VP A ++ + E + T YTPYQ E++QG L++L
Sbjct: 60 KNKTVLEMPTFLGAGTYFHYVP-AHVKYLIERSEFLTSYTPYQAEISQGMLQAL 112
>UniRef50_A4YHB7 Cluster: Glycine dehydrogenase; n=1; Metallosphaera
sedula DSM 5348|Rep: Glycine dehydrogenase -
Metallosphaera sedula DSM 5348
Length = 447
Score = 51.6 bits (118), Expect = 1e-05
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Frame = +3
Query: 240 PRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNIS--EPISEYDLIERVRLIAEKN 413
P I ML +G ++QL D VP+ + + + + P+ E D+ R+ +AE+N
Sbjct: 8 PNISRIKDMLREIGVDDVEQLFQD-VPRDLILRRELKVGYDSPLPEEDIRWRLNQVAERN 66
Query: 414 EIWR--SYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
R ++G G + +P +++R + + T YTPYQPEV QG L+ L
Sbjct: 67 LKLRYPPFLGAGAYPHSIP-SVIRFILSRSEFYTAYTPYQPEVNQGLLQGL 116
>UniRef50_Q9A353 Cluster: Probable glycine dehydrogenase
[decarboxylating] subunit 1; n=22; Bacteria|Rep:
Probable glycine dehydrogenase [decarboxylating] subunit
1 - Caulobacter crescentus (Caulobacter vibrioides)
Length = 448
Score = 51.6 bits (118), Expect = 1e-05
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +3
Query: 228 RHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAE 407
R++ +D V ML +G KS+D L D VP + +++ E D+ + +A
Sbjct: 2 RYLPLTPEDRVEMLGAIGVKSIDDLFVD-VPVSARRDAPVDLPHHAGELDVEREMAGLAR 60
Query: 408 KNEIWRS---YIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
+N + G G + VP A + ++ + + T YTPYQPE+AQG L+ L
Sbjct: 61 RNRAAGEGPFFCGAGAYRHHVP-ATVDHIIQRSEFLTSYTPYQPEIAQGTLQVL 113
>UniRef50_Q0EW11 Cluster: Glycine cleavage system P protein, subunit
1; n=1; Mariprofundus ferrooxydans PV-1|Rep: Glycine
cleavage system P protein, subunit 1 - Mariprofundus
ferrooxydans PV-1
Length = 435
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Frame = +3
Query: 264 MLDLLGYKSLDQLTNDAVPKKIQFQ-GLMNISEPISEYDLIERVRLIAEKNEI---WRSY 431
MLD +G + L D +P + + G + I++ + E ++ + AE+N R +
Sbjct: 1 MLDTIGVSGIGDLFAD-IPSEFHIEKGSLAIADALPEAGIVRKFTRAAEQNRNATNTRYF 59
Query: 432 IGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
+G G ++ VP A++ + + T YTPYQPE++QG L++L
Sbjct: 60 LGGGTYHHFVP-AVVDYVISRGEFLTAYTPYQPEISQGTLQAL 101
>UniRef50_Q73M84 Cluster: Glycine cleavage system P protein, subunit
1; n=1; Treponema denticola|Rep: Glycine cleavage system
P protein, subunit 1 - Treponema denticola
Length = 434
Score = 50.4 bits (115), Expect = 3e-05
Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Frame = +3
Query: 225 SRHIGPRDQDIVTMLDLLGYKSLDQLTN--DAVPKKIQFQGLMNISEPISEYDLIERVRL 398
S +I ++ MLDL+G KS+D L + + KK+ +I E ++ ++ + +
Sbjct: 2 SNYIPHSAEETKEMLDLIGVKSIDDLYSFDNKGCKKV------DIGEGKTQAEVEKFFQN 55
Query: 399 IAEKNEIWRSYI-GMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLES 557
++ +N +++S + G G +N P A+ R+M + T YTPYQPE+ QG L++
Sbjct: 56 LSSENTVFKSILRGAGAYNHYAPAAV-RHMASREEFLTAYTPYQPEMNQGELQA 108
>UniRef50_Q3APU1 Cluster: Glycine dehydrogenase subunit 1; n=8;
Chlorobiaceae|Rep: Glycine dehydrogenase subunit 1 -
Chlorobium chlorochromatii (strain CaD3)
Length = 445
Score = 49.6 bits (113), Expect = 5e-05
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Frame = +3
Query: 234 IGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKN 413
I + + ML +G S D+L D +P ++ Q + + + E + + +A N
Sbjct: 4 IATTESERTEMLQAIGVNSFDELIAD-IPYSVRLQRALELLPSLDEPQVRRLLERMAASN 62
Query: 414 EI---WRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
+ S++G G ++ +P AI + + + T YTPYQ EV+QG L+++
Sbjct: 63 RCTAEYVSFLGGGAYDHFIPSAI-KTIISRSEFYTAYTPYQAEVSQGTLQAI 113
>UniRef50_O67193 Cluster: Probable glycine dehydrogenase
[decarboxylating] subunit 1; n=1; Aquifex aeolicus|Rep:
Probable glycine dehydrogenase [decarboxylating] subunit
1 - Aquifex aeolicus
Length = 439
Score = 48.8 bits (111), Expect = 9e-05
Identities = 32/110 (29%), Positives = 57/110 (51%)
Frame = +3
Query: 231 HIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEK 410
+I +++ +L LG +SL+ L + +PK++ F + EP SE +L E
Sbjct: 3 YIPHSEEETKEILSKLGLESLEDLFSH-IPKEL-FAKDFSFPEPKSEEELRRIFERACED 60
Query: 411 NEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
E+ +IG G ++ +P I + + + T YTPYQ E +QG L+++
Sbjct: 61 TELPLYFIGAGAYDRIIPSVIWQ-ILSRGEFLTPYTPYQAEASQGTLQAI 109
>UniRef50_Q1INU0 Cluster: Glycine dehydrogenase; n=2;
Acidobacteria|Rep: Glycine dehydrogenase - Acidobacteria
bacterium (strain Ellin345)
Length = 443
Score = 47.6 bits (108), Expect = 2e-04
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 RHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAE 407
R++ D ML LG ++D L +P + + + I E ++++ + A
Sbjct: 2 RYLPKSQSDRDQMLRELGCATIDDLFAP-IPAEYRLTRDLAIPRQYGESEILDFFKQRAS 60
Query: 408 KNEIWRS-YIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
+N S +IG G +N P ++ ++ W T YTPYQPE++QG L+++
Sbjct: 61 ENANGYSIFIGAGAYNHYRP-VVIDSLISRGEWFTAYTPYQPEISQGTLQAI 111
>UniRef50_Q6MEJ2 Cluster: Probable glycine dehydrogenase P protein
subunit 1; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Probable glycine dehydrogenase P protein
subunit 1 - Protochlamydia amoebophila (strain UWE25)
Length = 446
Score = 47.2 bits (107), Expect = 3e-04
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +3
Query: 234 IGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKN 413
I + I ML +G +++++L ++P + Q ++ + +SEY+ I+ + +A +N
Sbjct: 4 ISNKTPQIEAMLTEIGIQNVEELFK-SIPSSLILQA-PSVDDGLSEYEGIQLIESLAVRN 61
Query: 414 EIWR--SYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLE 554
SY+G G + +P A++ + + T YTPYQ E +QG L+
Sbjct: 62 TFPNLVSYLGAGAYEHHIP-ALVGAVCSKSEFLTAYTPYQAEASQGMLQ 109
>UniRef50_A3EPS9 Cluster: Putative glycine dehydrogenase, subunit 1;
n=1; Leptospirillum sp. Group II UBA|Rep: Putative
glycine dehydrogenase, subunit 1 - Leptospirillum sp.
Group II UBA
Length = 453
Score = 46.0 bits (104), Expect = 6e-04
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +3
Query: 264 MLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNEIWRSYI--- 434
ML LG SL++L P F L E ++E +++ +R +A KN +
Sbjct: 15 MLGFLGLTSLEELVRH-YPTDRTFPSLPLAGEGMTEREVLAELRGLAAKNAGSSKVVVFR 73
Query: 435 GMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
G G ++ +P A+ + + T YTPYQPE +QG L+++
Sbjct: 74 GAGAYDHFIPEAV-HALVGRGEFLTSYTPYQPEASQGLLQAI 114
>UniRef50_Q9YA15 Cluster: Probable glycine dehydrogenase
[decarboxylating] subunit 1; n=8; Archaea|Rep: Probable
glycine dehydrogenase [decarboxylating] subunit 1 -
Aeropyrum pernix
Length = 465
Score = 45.6 bits (103), Expect = 8e-04
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Frame = +3
Query: 264 MLDLLGYKSLDQLTNDAVPKKI----QFQGL-MNISEPISEYDLIERVRLIAEKNEIWRS 428
ML+ +G S+D L D P + ++ L + P+SE +++ R+ I +N+ +
Sbjct: 17 MLEAIGVSSVDDLYRDIPPTILLSPEEWDSLPIGEGRPLSEAEVLARINDILSRNKYFTD 76
Query: 429 ---YIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
++G G VP ++++ + + T YTPYQ E++QG +++L
Sbjct: 77 PPPFVGGGVWPRYVP-SVVKALITRGEFLTAYTPYQAEISQGLMQAL 122
>UniRef50_Q8KC05 Cluster: Probable glycine dehydrogenase
[decarboxylating] subunit 1; n=11; Bacteria|Rep:
Probable glycine dehydrogenase [decarboxylating] subunit
1 - Chlorobium tepidum
Length = 444
Score = 43.2 bits (97), Expect = 0.004
Identities = 27/108 (25%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Frame = +3
Query: 246 DQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNEIWR 425
D + ML +G ++ + L D +P++I+ + +++ + E ++ + +A N
Sbjct: 8 DAERAEMLREIGVENFEALIAD-IPEEIRLKKALDLFPAMGEPEVKSLLEKMASGNAATC 66
Query: 426 ---SYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
S++G G ++ +P A+ + + + T YTPYQ EV+QG L+++
Sbjct: 67 DHVSFLGAGAYDHFIPSAV-KTIASRSEFYTAYTPYQAEVSQGTLQAI 113
>UniRef50_Q2AE33 Cluster: Glycine cleavage system P-protein; n=1;
Halothermothrix orenii H 168|Rep: Glycine cleavage
system P-protein - Halothermothrix orenii H 168
Length = 447
Score = 41.5 bits (93), Expect = 0.013
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +3
Query: 264 MLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKN---EIWRSYI 434
ML +G ++++ L +P + F+ NI +SE +L ++ A +N E +
Sbjct: 14 MLKKIGVENVEDLFKP-IPDDVTFKRPFNIPPGLSELELKRMIKSKAARNISMEEQICFA 72
Query: 435 GMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESL 560
G G ++ +P A + ++ + T YTPYQ E++QG L+++
Sbjct: 73 GGGAYDHYIP-AHIDHLISRSEFYTAYTPYQAELSQGVLQAM 113
>UniRef50_P48906 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=1; Pichia canadensis|Rep: NADH-ubiquinone
oxidoreductase chain 2 - Pichia canadensis (Yeast)
(Hansenula wingei)
Length = 567
Score = 33.9 bits (74), Expect = 2.6
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -1
Query: 412 FFSAINLTRSIRSYSLMGSLI----FIRPWN*IFFGTASLVNWSKLLYPNKSNIVTIS*S 245
F + INL S+ Y++ +++ FI I G A + NWS LLY N + I+T S
Sbjct: 217 FINNINLIYSLDIYNINNNILIGWLFIIIGLLIKIGAAPMYNWSILLYSNSNTIITSYIS 276
Query: 244 LGP 236
L P
Sbjct: 277 LIP 279
>UniRef50_A4DH38 Cluster: Integrase; n=3; Listeria|Rep: Integrase -
Listeria monocytogenes FSL N1-017
Length = 376
Score = 33.5 bits (73), Expect = 3.5
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -2
Query: 180 FVL*HDEWHLAFYFRNKFYENHRSYSYSLTFLLKISALLITNDINCTQH 34
FV EW+ F + K EN + Y Y++ F K L ND+N T +
Sbjct: 61 FVEAFKEWYTTFRKQKKSIENDKHYDYAIKFCEKYFVGLKINDVNRTTY 109
>UniRef50_Q9PH65 Cluster: Outer membrane usher protein; n=5;
Xanthomonadaceae|Rep: Outer membrane usher protein -
Xylella fastidiosa
Length = 901
Score = 33.1 bits (72), Expect = 4.6
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = -1
Query: 424 RHISFFSAINLTRSIRSYSLMGSLIFIRPWN*IFFGTASLVNWSKLLYPNKSNI 263
R+I+ + L+ + ++SL G++ + N F GT+ +++SKLL P +NI
Sbjct: 468 RYIAAIAGAGLSTPVGAFSLDGTVARTKLRNDTFSGTSLRLSYSKLLSPTNTNI 521
>UniRef50_P36421 Cluster: Tyrosyl-tRNA synthetase, cytoplasmic;
n=27; Ascomycota|Rep: Tyrosyl-tRNA synthetase,
cytoplasmic - Saccharomyces cerevisiae (Baker's yeast)
Length = 394
Score = 32.3 bits (70), Expect = 8.1
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 267 LDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEK 410
L LGYK L N VP Q G M+ S+P S+ DL+E + + +K
Sbjct: 203 LPSLGYKKRAHLMNPMVPGLAQ-GGKMSASDPNSKIDLLEEPKQVKKK 249
>UniRef50_Q9M0X9 Cluster: 4-coumarate--CoA ligase-like 7; n=1;
Arabidopsis thaliana|Rep: 4-coumarate--CoA ligase-like 7
- Arabidopsis thaliana (Mouse-ear cress)
Length = 544
Score = 32.3 bits (70), Expect = 8.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 273 LLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIE 386
LLG K ++ + K + F +M +SEP+SEY +E
Sbjct: 149 LLGSKDTVEIPPGSNSKILSFDNVMELSEPVSEYPFVE 186
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,425,579
Number of Sequences: 1657284
Number of extensions: 11779806
Number of successful extensions: 26655
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 26003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26625
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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