Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g06f
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   0.78 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.5  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   5.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.6  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 462 PHAIMRNMFENPGWTTQYTPYQPEVAQGR 548
           P+ ++ N + +P  +  Y PY P    GR
Sbjct: 127 PYTVISNGYSSPMSSGSYDPYSPNGKIGR 155


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 492  NPGWTTQYTPYQP 530
            NPG TT Y  +QP
Sbjct: 1359 NPGSTTNYPEWQP 1371


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 4   HYFRRFCERYMLCT 45
           +++R+FC RY   T
Sbjct: 543 NFYRKFCARYSAAT 556


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 155 CHSSCYNTKY 184
           C S C++TKY
Sbjct: 85  CRSECFSTKY 94


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 374 VFTYGLTDIHKTLELNLLWYC 312
           + TY +  I++   L +LW C
Sbjct: 240 ILTYLIWTIYEMYHLAILWSC 260


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 321 KKIQFQGLMNISEPISEYDLIERVRLIAEK 410
           KKIQ  G+M     +S  +LI+R   I  K
Sbjct: 297 KKIQIFGIMITKACMSASNLIQRTPNICYK 326


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 27  ALHVVYNLCHLLLIMQRFLKGKLMSRSTIDGFHKTYF 137
           +++ V+ + HLL I   F+  +    +T+    + YF
Sbjct: 187 SVYKVFPVEHLLFIANAFITSQSCENATLYSGDEMYF 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,764
Number of Sequences: 336
Number of extensions: 3396
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)