Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g06f
         (565 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64590-1|AAA36463.1| 1020|Homo sapiens glycine decarboxylase pro...   148   1e-35
M63635-1|AAA36478.1| 1020|Homo sapiens glycine decarboxylase pro...   148   1e-35
D90239-1|BAA14286.1| 1020|Homo sapiens glycine decarboxylase pre...   148   1e-35
BC111995-1|AAI11996.1| 1020|Homo sapiens glycine dehydrogenase (...   148   1e-35
BC111993-1|AAI11994.1| 1020|Homo sapiens glycine dehydrogenase (...   148   1e-35
AL353718-2|CAH74116.1| 1036|Homo sapiens glycine dehydrogenase (...   148   1e-35
AL162411-3|CAH69992.1| 1036|Homo sapiens glycine dehydrogenase (...   148   1e-35

>M64590-1|AAA36463.1| 1020|Homo sapiens glycine decarboxylase
           protein.
          Length = 1020

 Score =  148 bits (359), Expect = 1e-35
 Identities = 65/124 (52%), Positives = 85/124 (68%)
 Frame = +3

Query: 192 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISE 371
           + L P   DF  RHIGP D+D   ML  LG  S+D+L    VP  I+ +  + + +P+ E
Sbjct: 54  ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCE 113

Query: 372 YDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRL 551
            +++  +  I+ KN+IWRSYIGMGY+NC VP  I+RN+ EN GW TQYTPYQPEV+QGRL
Sbjct: 114 NEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRL 173

Query: 552 ESLL 563
           ESLL
Sbjct: 174 ESLL 177


>M63635-1|AAA36478.1| 1020|Homo sapiens glycine decarboxylase
           protein.
          Length = 1020

 Score =  148 bits (359), Expect = 1e-35
 Identities = 65/124 (52%), Positives = 85/124 (68%)
 Frame = +3

Query: 192 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISE 371
           + L P   DF  RHIGP D+D   ML  LG  S+D+L    VP  I+ +  + + +P+ E
Sbjct: 54  ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCE 113

Query: 372 YDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRL 551
            +++  +  I+ KN+IWRSYIGMGY+NC VP  I+RN+ EN GW TQYTPYQPEV+QGRL
Sbjct: 114 NEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRL 173

Query: 552 ESLL 563
           ESLL
Sbjct: 174 ESLL 177


>D90239-1|BAA14286.1| 1020|Homo sapiens glycine decarboxylase
           precursor protein.
          Length = 1020

 Score =  148 bits (359), Expect = 1e-35
 Identities = 65/124 (52%), Positives = 85/124 (68%)
 Frame = +3

Query: 192 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISE 371
           + L P   DF  RHIGP D+D   ML  LG  S+D+L    VP  I+ +  + + +P+ E
Sbjct: 54  ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCE 113

Query: 372 YDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRL 551
            +++  +  I+ KN+IWRSYIGMGY+NC VP  I+RN+ EN GW TQYTPYQPEV+QGRL
Sbjct: 114 NEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRL 173

Query: 552 ESLL 563
           ESLL
Sbjct: 174 ESLL 177


>BC111995-1|AAI11996.1| 1020|Homo sapiens glycine dehydrogenase
           (decarboxylating) protein.
          Length = 1020

 Score =  148 bits (359), Expect = 1e-35
 Identities = 65/124 (52%), Positives = 85/124 (68%)
 Frame = +3

Query: 192 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISE 371
           + L P   DF  RHIGP D+D   ML  LG  S+D+L    VP  I+ +  + + +P+ E
Sbjct: 54  ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCE 113

Query: 372 YDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRL 551
            +++  +  I+ KN+IWRSYIGMGY+NC VP  I+RN+ EN GW TQYTPYQPEV+QGRL
Sbjct: 114 NEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRL 173

Query: 552 ESLL 563
           ESLL
Sbjct: 174 ESLL 177


>BC111993-1|AAI11994.1| 1020|Homo sapiens glycine dehydrogenase
           (decarboxylating) protein.
          Length = 1020

 Score =  148 bits (359), Expect = 1e-35
 Identities = 65/124 (52%), Positives = 85/124 (68%)
 Frame = +3

Query: 192 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISE 371
           + L P   DF  RHIGP D+D   ML  LG  S+D+L    VP  I+ +  + + +P+ E
Sbjct: 54  ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCE 113

Query: 372 YDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRL 551
            +++  +  I+ KN+IWRSYIGMGY+NC VP  I+RN+ EN GW TQYTPYQPEV+QGRL
Sbjct: 114 NEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRL 173

Query: 552 ESLL 563
           ESLL
Sbjct: 174 ESLL 177


>AL353718-2|CAH74116.1| 1036|Homo sapiens glycine dehydrogenase
           (decarboxylating) protein.
          Length = 1036

 Score =  148 bits (359), Expect = 1e-35
 Identities = 65/124 (52%), Positives = 85/124 (68%)
 Frame = +3

Query: 192 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISE 371
           + L P   DF  RHIGP D+D   ML  LG  S+D+L    VP  I+ +  + + +P+ E
Sbjct: 54  ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCE 113

Query: 372 YDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRL 551
            +++  +  I+ KN+IWRSYIGMGY+NC VP  I+RN+ EN GW TQYTPYQPEV+QGRL
Sbjct: 114 NEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRL 173

Query: 552 ESLL 563
           ESLL
Sbjct: 174 ESLL 177


>AL162411-3|CAH69992.1| 1036|Homo sapiens glycine dehydrogenase
           (decarboxylating) protein.
          Length = 1036

 Score =  148 bits (359), Expect = 1e-35
 Identities = 65/124 (52%), Positives = 85/124 (68%)
 Frame = +3

Query: 192 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISE 371
           + L P   DF  RHIGP D+D   ML  LG  S+D+L    VP  I+ +  + + +P+ E
Sbjct: 54  ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCE 113

Query: 372 YDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRL 551
            +++  +  I+ KN+IWRSYIGMGY+NC VP  I+RN+ EN GW TQYTPYQPEV+QGRL
Sbjct: 114 NEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRL 173

Query: 552 ESLL 563
           ESLL
Sbjct: 174 ESLL 177


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,983,118
Number of Sequences: 237096
Number of extensions: 1773694
Number of successful extensions: 6363
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6363
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)