Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g06f
         (565 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    26   0.30 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   2.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   3.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   3.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   3.7  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   4.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   8.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   8.6  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   8.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   8.6  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 542 LCDFWLIRRILCSPSGIFKHVPHDGMRYATI 450
           +CDF++   + CS S IF  V     RY  +
Sbjct: 258 VCDFYIAMDVTCSTSSIFNLVAISIDRYIAV 288


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 480 NMFENPGWTTQYTPYQPEVAQGRLE 554
           N + +P  T+ Y PY P    GR E
Sbjct: 130 NGYASPMSTSSYDPYSPNSKIGRDE 154


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 488 KHVPHDGMRYATIVVTHSDV 429
           K  PH   RY  + V H D+
Sbjct: 114 KEEPHAPYRYEAVAVIHKDL 133


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 488 KHVPHDGMRYATIVVTHSDV 429
           K  PH   RY  + V H D+
Sbjct: 114 KEEPHAPYRYEAVAVIHKDL 133


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 488 KHVPHDGMRYATIVVTHSDV 429
           K  PH   RY  + V H D+
Sbjct: 114 KEEPHAPYRYEAVAVIHKDL 133


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 554 FKSTLCDFWLIRRILCSPSGI 492
           F    CD W+   ++CS + I
Sbjct: 93  FGPRFCDTWIAFDVMCSTASI 113


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 563 KQAFKSTLCDFWLIRRILCSPSGI 492
           K  F   LC  WL   +LC  + I
Sbjct: 101 KWIFGIHLCKLWLTCDVLCCTASI 124


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 563 KQAFKSTLCDFWLIRRILCSPSGI 492
           K  F   LC  WL   +LC  + I
Sbjct: 101 KWIFGIHLCKLWLTCDVLCCTASI 124


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 138 RNKFYENHRSYSYSLTFLLKISALLIT 58
           R+ F     +Y Y  +FLL +S  + T
Sbjct: 215 RSSFQGPPFTYRYGFSFLLYVSGFITT 241


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 563 KQAFKSTLCDFWLIRRILCSPSGI 492
           K  F   LC  WL   +LC  + I
Sbjct: 101 KWIFGIHLCKLWLTCDVLCCTASI 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,243
Number of Sequences: 438
Number of extensions: 3747
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)