Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g01r
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical p...    30   3.1  
AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA ...    30   3.1  
AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-P...    28   9.5  

>X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical
           protein protein.
          Length = 3429

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 534 VVTGAHRHVQCKCATHLEI*VVRSQRLPNPSNRNALLLHGRNKQ 403
           V  G H H+        +I +V S +  +P+N+N  +LH  N +
Sbjct: 414 VTPGMHFHLAASINAETDIPLVPSMQTSDPANQNVFILHWLNNK 457


>AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA
           protein.
          Length = 3419

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 534 VVTGAHRHVQCKCATHLEI*VVRSQRLPNPSNRNALLLHGRNKQ 403
           V  G H H+        +I +V S +  +P+N+N  +LH  N +
Sbjct: 407 VTPGMHFHLAASINAETDIPLVPSMQTSDPANQNVFILHWLNNK 450


>AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-PA
           protein.
          Length = 266

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 539 VKWLLEPIDMYNVNAPPTLRYKL 471
           + W+L  +D Y V +PP ++Y++
Sbjct: 239 IDWILMVVDNYTVRSPPKIQYRV 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,370,594
Number of Sequences: 53049
Number of extensions: 600515
Number of successful extensions: 1159
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)