Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g01f
         (581 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VMA9 Cluster: CG31635-PA; n=1; Drosophila melanogaste...    57   3e-07
UniRef50_Q29JV7 Cluster: GA16351-PA; n=1; Drosophila pseudoobscu...    49   7e-05
UniRef50_Q0C7C1 Cluster: Putative uncharacterized protein; n=1; ...    47   3e-04
UniRef50_Q0CK83 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_Q6MI67 Cluster: Predicted metal-dependent hydrolase; n=...    33   4.9  
UniRef50_A3IV48 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_A2FR38 Cluster: Small GTP-binding protein, putative; n=...    33   6.5  
UniRef50_A0BUL9 Cluster: Chromosome undetermined scaffold_13, wh...    32   8.6  
UniRef50_A0BEZ3 Cluster: Chromosome undetermined scaffold_103, w...    32   8.6  

>UniRef50_Q9VMA9 Cluster: CG31635-PA; n=1; Drosophila
           melanogaster|Rep: CG31635-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 1585

 Score = 56.8 bits (131), Expect = 3e-07
 Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = +3

Query: 408 RTVSFPADDQLVTQYCEPENPWKHV-PATNRAQIAADYLELCRRYNTTPIDSVLQLIR 578
           R VSFP D+QLVT Y EP NPWK V    + ++I   Y + C+++NT P++SV+  +R
Sbjct: 210 RRVSFP-DNQLVTGYLEPANPWKQVYLVKSSSEIVDQYQQSCKKHNTQPLESVVDHLR 266


>UniRef50_Q29JV7 Cluster: GA16351-PA; n=1; Drosophila
           pseudoobscura|Rep: GA16351-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 1544

 Score = 49.2 bits (112), Expect = 7e-05
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = +3

Query: 408 RTVSFPADDQLVTQYCEPENPWKHVPATNR-AQIAADYLELCRRYNTTPIDSVL 566
           R VSFP D+ LVT Y EP NPWK         +I   Y + CR++ T P++S+L
Sbjct: 198 RRVSFP-DNALVTGYLEPANPWKQACLVRSITEIVDQYDQSCRKHRTEPLESIL 250


>UniRef50_Q0C7C1 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 2154

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 20/64 (31%), Positives = 36/64 (56%)
 Frame = +3

Query: 378 EISEKNNKKIRTVSFPADDQLVTQYCEPENPWKHVPATNRAQIAADYLELCRRYNTTPID 557
           ++ E++ +  R VSFP D QL+T Y EP +PW  V   +  ++   Y   C ++ T P+ 
Sbjct: 395 KMGERSGESARRVSFPKDAQLITGYLEPIDPWACVTIISVPELIELYRTSCAKHFTEPLP 454

Query: 558 SVLQ 569
           ++ +
Sbjct: 455 AITE 458


>UniRef50_Q0CK83 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus terreus NIH2624|Rep: Putative
           uncharacterized protein - Aspergillus terreus (strain
           NIH 2624)
          Length = 842

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 13/34 (38%), Positives = 26/34 (76%)
 Frame = +3

Query: 480 VPATNRAQIAADYLELCRRYNTTPIDSVLQLIRE 581
           + A+++A    D+++ CR+ NTT I+++LQ+I+E
Sbjct: 302 IDASDKAVKLRDWIDECRKLNTTGINAILQVIQE 335


>UniRef50_Q6MI67 Cluster: Predicted metal-dependent hydrolase; n=1;
           Bdellovibrio bacteriovorus|Rep: Predicted
           metal-dependent hydrolase - Bdellovibrio bacteriovorus
          Length = 422

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 22/89 (24%), Positives = 40/89 (44%)
 Frame = +3

Query: 306 PDKDIACAPFSLIPTEKAQNVCDNEISEKNNKKIRTVSFPADDQLVTQYCEPENPWKHVP 485
           P KD+    F  IP   A+   D   S  N   ++ +   +   ++T+  +    W H+P
Sbjct: 68  PHKDLLDKVFPDIPVYFAR--MDGHSSWLNTTALKEMGLESATGILTEK-DHLRAWDHLP 124

Query: 486 ATNRAQIAADYLELCRRYNTTPIDSVLQL 572
           + +++Q  A+ L+ CR +N      V  L
Sbjct: 125 SFSKSQQRANILQACRTFNAAGFTHVRDL 153


>UniRef50_A3IV48 Cluster: Putative uncharacterized protein; n=1;
           Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
           protein - Cyanothece sp. CCY 0110
          Length = 206

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +3

Query: 330 PFSLIPTEKAQNVCDNEISEKNNKKIRTVSFPADDQLVTQYCEPENPWKHVPATNRAQIA 509
           PF  IP +  +   D+ + E        + FP D   V ++   +  W  +P   +  IA
Sbjct: 6   PFRFIPKKSIEKQADSILQEMKKTSNYDLKFPIDASRVAEFLGLDVVWDSIPNDEKGIIA 65

Query: 510 ADYLEL 527
           A  L L
Sbjct: 66  ARILPL 71


>UniRef50_A2FR38 Cluster: Small GTP-binding protein, putative; n=1;
           Trichomonas vaginalis G3|Rep: Small GTP-binding protein,
           putative - Trichomonas vaginalis G3
          Length = 192

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -1

Query: 116 YFVISYGSVFFLLQFFSIGRLESKHSAPFIHRLPYWIR 3
           Y   ++ S F +L FF    LE +HSAP I  LP W++
Sbjct: 70  YTKSTFKSAFIVLVFFDPSPLE-EHSAPTIEHLPDWVK 106


>UniRef50_A0BUL9 Cluster: Chromosome undetermined scaffold_13, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_13,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 188

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -3

Query: 369 IHFEPSRSGSVRTEHMRCLYQDRQTYLSRKLLSHITANDHISK 241
           I++EPS SGSV++  +    QD+  YL+ +L + I  N+ + K
Sbjct: 8   IYYEPSDSGSVKSVQVGNAKQDQVRYLTDQLQAVIMFNEKLEK 50


>UniRef50_A0BEZ3 Cluster: Chromosome undetermined scaffold_103,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_103,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 556

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
 Frame = +3

Query: 288 IDMSADPDKDIACAPFSLIPTEKAQNVCDNEIS------EKNNKKIRTVSFPADDQLVTQ 449
           I +  DP+ D     FS+I  +K+ +V +NEI       ++ NK +  +      Q V  
Sbjct: 109 IKVKNDPEDDSNLCQFSIIADKKSNSVVENEIQNLSVSVDEINKNLTRLDKFVKYQFVKS 168

Query: 450 YCEPENPWKHVPATNRAQIAADYLELC 530
            C+P    ++    + +QI+  Y   C
Sbjct: 169 KCQPSEIQENKNKMSGSQISDKYKTEC 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,486,909
Number of Sequences: 1657284
Number of extensions: 11233920
Number of successful extensions: 29450
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29444
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)