Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g01f
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.1  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   4.1  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   9.5  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   9.5  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   9.5  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 431 RSASHTVLRARKPLETCSGNESRSDSGGLFGVV 529
           R+A H +LRA +   + + N S S SG   G +
Sbjct: 324 RNAQHLLLRANRLTVSDNHNLSNSGSGNTAGTI 356


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 422  SRRRSASHTVLRARKPLETCSGNESRSDSGG 514
            SR RS S +  R+R      S + SRS SGG
Sbjct: 1095 SRSRSRSRSRSRSRSGSAKGSRSRSRSGSGG 1125


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 180 STECVRNNKSYMLCECNECIFC 245
           +T  +R  ++   CE + C+FC
Sbjct: 138 TTRPLRKCRNKSTCELDHCVFC 159


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 180 STECVRNNKSYMLCECNECIFC 245
           +T  +R  ++   CE + C+FC
Sbjct: 139 TTRPLRKCRNKSTCELDHCVFC 160


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 184 QNVFVITNLICCVSVTSVSFANVV 255
           +N+ V +NL CC+    ++  ++V
Sbjct: 191 KNILVKSNLTCCIGDLGLAVRHIV 214


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,553
Number of Sequences: 2352
Number of extensions: 13127
Number of successful extensions: 69
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)