Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g01f
         (581 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035704-1|AAH35704.1|  180|Homo sapiens Unknown (protein for IM...    45   2e-04
AL360270-1|CAI17128.1|  769|Homo sapiens chromosome 1 open readi...    30   6.8  

>BC035704-1|AAH35704.1|  180|Homo sapiens Unknown (protein for
           IMAGE:5573062) protein.
          Length = 180

 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 16/58 (27%), Positives = 34/58 (58%)
 Frame = +3

Query: 408 RTVSFPADDQLVTQYCEPENPWKHVPATNRAQIAADYLELCRRYNTTPIDSVLQLIRE 581
           + V+FP+D+ +V+   EP++PW+H       ++   Y + C++ N   I  +L+ ++E
Sbjct: 44  KRVTFPSDEDIVSGAVEPKDPWRHAQNVTVDEVIGAYKQACQKLNCRQIPKLLRQLQE 101


>AL360270-1|CAI17128.1|  769|Homo sapiens chromosome 1 open reading
           frame 103 protein.
          Length = 769

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 464 KPLETCSGNESRSDSGGLFGVVQAVQHDADRL 559
           KP E  SGN SR  SG ++ VVQ +  D   L
Sbjct: 11  KPAEENSGNASRCVSGCMYQVVQTIGSDGKNL 42


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,313,880
Number of Sequences: 237096
Number of extensions: 1654140
Number of successful extensions: 3314
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3314
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)