Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11g01f
         (581 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023408-1|AAY55824.1| 1585|Drosophila melanogaster AT18603p pro...    57   2e-08
AE014134-1126|AAF52412.2| 1585|Drosophila melanogaster CG31635-P...    57   2e-08
AY071594-1|AAL49216.1|  698|Drosophila melanogaster RE64386p pro...    28   8.0  
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ...    28   8.0  
AE014296-2629|AAF49543.2|  698|Drosophila melanogaster CG5235-PA...    28   8.0  

>BT023408-1|AAY55824.1| 1585|Drosophila melanogaster AT18603p
           protein.
          Length = 1585

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = +3

Query: 408 RTVSFPADDQLVTQYCEPENPWKHV-PATNRAQIAADYLELCRRYNTTPIDSVLQLIR 578
           R VSFP D+QLVT Y EP NPWK V    + ++I   Y + C+++NT P++SV+  +R
Sbjct: 210 RRVSFP-DNQLVTGYLEPANPWKQVYLVKSSSEIVDQYQQSCKKHNTQPLESVVDHLR 266


>AE014134-1126|AAF52412.2| 1585|Drosophila melanogaster CG31635-PA
           protein.
          Length = 1585

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = +3

Query: 408 RTVSFPADDQLVTQYCEPENPWKHV-PATNRAQIAADYLELCRRYNTTPIDSVLQLIR 578
           R VSFP D+QLVT Y EP NPWK V    + ++I   Y + C+++NT P++SV+  +R
Sbjct: 210 RRVSFP-DNQLVTGYLEPANPWKQVYLVKSSSEIVDQYQQSCKKHNTQPLESVVDHLR 266


>AY071594-1|AAL49216.1|  698|Drosophila melanogaster RE64386p
           protein.
          Length = 698

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = +2

Query: 410 YSVISRRRSASHTVLRARKPLETC 481
           Y V+  +++ +HT+L+ ++ +ETC
Sbjct: 132 YDVLDGKQNGTHTILKFKRKIETC 155


>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
           protein.
          Length = 4671

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 138 Y*RGDAQRAVLISISTECVRNNKSYMLCECNECIF 242
           Y   +   A+++ I+ + +   KSY+ C C E I+
Sbjct: 393 YNTSERTSALMVKITNQMIETCKSYITCRCKETIW 427


>AE014296-2629|AAF49543.2|  698|Drosophila melanogaster CG5235-PA
           protein.
          Length = 698

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = +2

Query: 410 YSVISRRRSASHTVLRARKPLETC 481
           Y V+  +++ +HT+L+ ++ +ETC
Sbjct: 132 YDVLDGKQNGTHTILKFKRKIETC 155


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,561,530
Number of Sequences: 53049
Number of extensions: 547403
Number of successful extensions: 1370
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)