Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11g01f
(581 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 31 0.60
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 28 4.2
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 28 4.2
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 28 4.2
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 28 5.6
Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z68343-4|CAA92780.2| 298|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z68342-11|CAA92777.2| 298|Caenorhabditis elegans Hypothetical p... 27 7.4
Z68314-5|CAA92663.1| 334|Caenorhabditis elegans Hypothetical pr... 27 7.4
U58752-2|AAB00665.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.7
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 31.1 bits (67), Expect = 0.60
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 408 RTVSFPADDQLVTQYCEPENPWKH-----VPATNRAQIAADYLELCRRYNTTPIDSV 563
RTVSFPAD L+T Y E + H + ++I Y E C+R P +V
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQCAPSAAV 134
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 31.1 bits (67), Expect = 0.60
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 408 RTVSFPADDQLVTQYCEPENPWKH-----VPATNRAQIAADYLELCRRYNTTPIDSV 563
RTVSFPAD L+T Y E + H + ++I Y E C+R P +V
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQCAPSAAV 134
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 31.1 bits (67), Expect = 0.60
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 408 RTVSFPADDQLVTQYCEPENPWKH-----VPATNRAQIAADYLELCRRYNTTPIDSV 563
RTVSFPAD L+T Y E + H + ++I Y E C+R P +V
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQCAPSAAV 134
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 31.1 bits (67), Expect = 0.60
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 408 RTVSFPADDQLVTQYCEPENPWKH-----VPATNRAQIAADYLELCRRYNTTPIDSV 563
RTVSFPAD L+T Y E + H + ++I Y E C+R P +V
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQCAPSAAV 134
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 372 DNEISEKNNKKIRTVSFPADDQLVTQYCEPENPWKHVPATNRAQIAADYLELCRRYNTTP 551
+N E+ KKIR + P L+T+ P P P T A I ++ +R +++
Sbjct: 566 ENGNDEEQEKKIRRIPIPL--VLITEPSNPSTPLATTPVTTAASICLWNNDISKRSSSST 623
Query: 552 ID 557
D
Sbjct: 624 ED 625
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 398 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 499
Q Y +ISRRR TVL + L T SG + R
Sbjct: 783 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 816
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 398 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 499
Q Y +ISRRR TVL + L T SG + R
Sbjct: 807 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 840
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 398 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 499
Q Y +ISRRR TVL + L T SG + R
Sbjct: 793 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 826
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 398 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 499
Q Y +ISRRR TVL + L T SG + R
Sbjct: 798 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 831
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 398 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 499
Q Y +ISRRR TVL + L T SG + R
Sbjct: 439 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 472
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 398 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 499
Q Y +ISRRR TVL + L T SG + R
Sbjct: 503 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 536
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 398 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 499
Q Y +ISRRR TVL + L T SG + R
Sbjct: 798 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 831
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 411 TVSFPADDQLVTQYCEPENPWKHVPATNRAQIAADYLELCRRYNTTPIDSVL 566
T +F VT++ P H PAT +A+D+L + + Y+ ++ +L
Sbjct: 979 TAAFRFGHSTVTRFT-PMQETVHDPATCVVDLASDFLNMSKIYDNEAVEQIL 1029
>Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical
protein K04C1.2b protein.
Length = 534
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 1 ALIQYGKRCMKGAECFDSRRPIEKNCNKKNTE 96
A +++G +K A+ FDS P++K C+K + E
Sbjct: 250 APLKFGNEKVKAAKLFDSVPPVQK-CSKNSVE 280
>Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical
protein K04C1.2a protein.
Length = 525
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 1 ALIQYGKRCMKGAECFDSRRPIEKNCNKKNTE 96
A +++G +K A+ FDS P++K C+K + E
Sbjct: 241 APLKFGNEKVKAAKLFDSVPPVQK-CSKNSVE 271
>Z68343-4|CAA92780.2| 298|Caenorhabditis elegans Hypothetical
protein F38E11.9 protein.
Length = 298
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 330 PFSLIPTEKAQNVCDNEISEKNNKKIRTVSFPADDQLVTQYC 455
PFSL+ +E QN N + + + ++FP + + C
Sbjct: 126 PFSLMASENFQNFLKNVCLKSGHPDVGNITFPTRETIQNYIC 167
>Z68342-11|CAA92777.2| 298|Caenorhabditis elegans Hypothetical
protein F38E11.9 protein.
Length = 298
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 330 PFSLIPTEKAQNVCDNEISEKNNKKIRTVSFPADDQLVTQYC 455
PFSL+ +E QN N + + + ++FP + + C
Sbjct: 126 PFSLMASENFQNFLKNVCLKSGHPDVGNITFPTRETIQNYIC 167
>Z68314-5|CAA92663.1| 334|Caenorhabditis elegans Hypothetical
protein F07H5.2 protein.
Length = 334
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 306 PDKDIACAPFSLIPTEKAQNVCDN-EISEKNNK 401
P+ D+A + FSL+P KAQ CD E+ +++ K
Sbjct: 165 PNGDVA-SKFSLMPEGKAQMTCDRFEVFDEDQK 196
>U58752-2|AAB00665.1| 571|Caenorhabditis elegans Hypothetical
protein B0218.2 protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 378 HCRIHFEPSRSGSVRTEHMRCLYQDRQTYLSRKLLSHI 265
H + F P R V +R + D T+LS+KL++ I
Sbjct: 357 HTLVPFRPPRVPEVLRMFLRAVCVDAGTFLSKKLMNDI 394
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,781,813
Number of Sequences: 27780
Number of extensions: 290976
Number of successful extensions: 746
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -