Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f24f
         (331 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024333-1|ABC86395.1|  157|Drosophila melanogaster IP10176p pro...    27   5.7  
AE014296-2106|AAF49950.3|  295|Drosophila melanogaster CG9760-PB...    27   5.7  
AY071617-1|AAL49239.1|  182|Drosophila melanogaster RE66546p pro...    26   10.0 
AY071388-1|AAL49010.1|  182|Drosophila melanogaster RE42847p pro...    26   10.0 
AE014297-3381|AAF56180.1|  182|Drosophila melanogaster CG10219-P...    26   10.0 

>BT024333-1|ABC86395.1|  157|Drosophila melanogaster IP10176p
           protein.
          Length = 157

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 2   SHIYSYNSTRNTLYFNTIYSNY*NHQKYYSTWNFSSTINS*HNCRT 139
           SH Y++ +  N  Y+N  Y N  NHQ +++     ST+   H   T
Sbjct: 11  SHYYAWWAYIN--YYNDDYYNQWNHQLFFTVTELFSTVLVMHLANT 54


>AE014296-2106|AAF49950.3|  295|Drosophila melanogaster CG9760-PB
           protein.
          Length = 295

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 2   SHIYSYNSTRNTLYFNTIYSNY*NHQKYYSTWNFSSTINS*HNCRT 139
           SH Y++ +  N  Y+N  Y N  NHQ +++     ST+   H   T
Sbjct: 118 SHYYAWWAYIN--YYNDDYYNQWNHQLFFTVTELFSTVLVMHLANT 161


>AY071617-1|AAL49239.1|  182|Drosophila melanogaster RE66546p
           protein.
          Length = 182

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -1

Query: 181 DILVPVLLNNVINKCPAIMLAVNRTAKVPGRIIFLMVSIITINGIK 44
           D + P ++ NV+ K   I L +   A + G   F+   +   NGIK
Sbjct: 124 DYMRPSVVGNVLPKVAHIALIIISVATLGGLFYFIQNDVGLANGIK 169


>AY071388-1|AAL49010.1|  182|Drosophila melanogaster RE42847p
           protein.
          Length = 182

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -1

Query: 181 DILVPVLLNNVINKCPAIMLAVNRTAKVPGRIIFLMVSIITINGIK 44
           D + P ++ NV+ K   I L +   A + G   F+   +   NGIK
Sbjct: 124 DYMRPSVVGNVLPKVAHIALIIISVATLGGLFYFIQNDVGLANGIK 169


>AE014297-3381|AAF56180.1|  182|Drosophila melanogaster CG10219-PA
           protein.
          Length = 182

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -1

Query: 181 DILVPVLLNNVINKCPAIMLAVNRTAKVPGRIIFLMVSIITINGIK 44
           D + P ++ NV+ K   I L +   A + G   F+   +   NGIK
Sbjct: 124 DYMRPSVVGNVLPKVAHIALIIISVATLGGLFYFIQNDVGLANGIK 169


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,259,886
Number of Sequences: 53049
Number of extensions: 80248
Number of successful extensions: 166
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)