Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f22r
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   6.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   6.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   6.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   6.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.9  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 129 SYPLQLFIPNMITAAQPKFLND 194
           SY L  F+P ++ A    FLND
Sbjct: 184 SYNLFSFVPLVVNALDHLFLND 205


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 129 SYPLQLFIPNMITAAQPKFLND 194
           SY L  F+P ++ A    FLND
Sbjct: 140 SYNLFSFVPLVVNALDHLFLND 161


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +2

Query: 8   TVMKNNLKS*TCNYIHHKFNYVAKTLLHS*HRYTT--KLLIFFIPFTTFYS*HDYCSST 178
           T+  +N+ S T      K+N + KTL H   R ++  +L++    F  F S + Y   T
Sbjct: 144 TLWLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQLILTQAIFLMFVSYNIYVCQT 202


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +2

Query: 8   TVMKNNLKS*TCNYIHHKFNYVAKTLLHS*HRYTT--KLLIFFIPFTTFYS*HDYCSST 178
           T+  +N+ S T      K+N + KTL H   R ++  +L++    F  F S + Y   T
Sbjct: 70  TLWLSNVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQLILTQAIFLMFVSYNIYVCQT 128


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 745 SXGPPYIFPLLNFLWFLLRAVEQRHVRQFMVLKNWY 638
           S GPP + P L F  F L         +++   +W+
Sbjct: 559 SIGPPLVIPFLLFGGFFLNVSSIPIYFKWLSFLSWF 594


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 745 SXGPPYIFPLLNFLWFLLRAVEQRHVRQFMVLKNWY 638
           S GPP + P L F  F L         +++   +W+
Sbjct: 559 SIGPPLVIPFLLFGGFFLNVSSIPIYFKWLSFLSWF 594


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 307 ILNLTWNYYH*FKKWTVFVILFLIKMPINFNIN 209
           ILN T N+Y+    W +  ++F   +    N++
Sbjct: 206 ILNQTVNFYNSAFGWPIAFLIFFATLDFLDNVD 238


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 328 IRKLFYIILNLTWNYYH*FKKWTVFVILFLIKMPINFN 215
           +R  +Y++ NLT+N  +    W     L L  + I FN
Sbjct: 36  MRSWYYLLTNLTYNNTNRKYYWLNVCCLNLSIVTIFFN 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,067
Number of Sequences: 336
Number of extensions: 3106
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)