Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f22r
         (746 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003550-1|AAH03550.2|  327|Homo sapiens chromosome 7 open readi...    69   2e-11
AF132954-1|AAD27729.1|  320|Homo sapiens CGI-20 protein protein.       69   2e-11

>BC003550-1|AAH03550.2|  327|Homo sapiens chromosome 7 open reading
           frame 20 protein.
          Length = 327

 Score = 68.5 bits (160), Expect = 2e-11
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = -2

Query: 739 GPPYIFPLLNFLWFLLRAVEQRHVRQFMVLKNWYAISIKRDPNYSIFLDNIGRIWFGI 566
           GPP++ PLLNF+WFLL AV+   +  F VL   Y  S++RDP Y+ +LD IG+++FG+
Sbjct: 229 GPPFVEPLLNFIWFLLLAVDGGKLTVFTVLCEQYQPSLRRDPMYNEYLDRIGQLFFGV 286


>AF132954-1|AAD27729.1|  320|Homo sapiens CGI-20 protein protein.
          Length = 320

 Score = 68.5 bits (160), Expect = 2e-11
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = -2

Query: 739 GPPYIFPLLNFLWFLLRAVEQRHVRQFMVLKNWYAISIKRDPNYSIFLDNIGRIWFGI 566
           GPP++ PLLNF+WFLL AV+   +  F VL   Y  S++RDP Y+ +LD IG+++FG+
Sbjct: 222 GPPFVEPLLNFIWFLLLAVDGGKLTVFTVLCEQYQPSLRRDPMYNEYLDRIGQLFFGV 279


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,870,918
Number of Sequences: 237096
Number of extensions: 1531428
Number of successful extensions: 1606
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)