Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f22f
         (587 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003550-1|AAH03550.2|  327|Homo sapiens chromosome 7 open readi...   157   2e-38
AF132954-1|AAD27729.1|  320|Homo sapiens CGI-20 protein protein.      154   3e-37
AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating B...    30   7.0  
AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein.     30   7.0  

>BC003550-1|AAH03550.2|  327|Homo sapiens chromosome 7 open reading
           frame 20 protein.
          Length = 327

 Score =  157 bits (382), Expect = 2e-38
 Identities = 76/170 (44%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
 Frame = +1

Query: 76  RGERGVVRVLDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERD 255
           R   GV RV  KL AS+  G YYEAHQMYRTL+FRY++Q K+ E                
Sbjct: 18  RNRGGVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHG 77

Query: 256 QQGSGADLAILFVEVLTKSETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSM-DN 432
           QQ S ADL++L +E L K+E +  +E +  LAK+F L+  + PER TF++ ++KWS   +
Sbjct: 78  QQNSAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSPERVTFVSRALKWSSGGS 137

Query: 433 NKKGDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANMLIELHTTKG 582
            K G P LH+ +A   WKE+ Y  +  HFLHS+DG   ANML+E  T++G
Sbjct: 138 GKLGHPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCANMLVEYSTSRG 187


>AF132954-1|AAD27729.1|  320|Homo sapiens CGI-20 protein protein.
          Length = 320

 Score =  154 bits (373), Expect = 3e-37
 Identities = 74/167 (44%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
 Frame = +1

Query: 85  RGVVRVLDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERDQQG 264
           R V RV  KL AS+  G YYEAHQMYRTL+FRY++Q K+ E                QQ 
Sbjct: 14  RAVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHGQQN 73

Query: 265 SGADLAILFVEVLTKSETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSM-DNNKK 441
           S ADL++L +E L K+E +  +E +  LAK+F L+  + PER TF++ ++KWS   + K 
Sbjct: 74  SAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSPERVTFVSRALKWSSGGSGKL 133

Query: 442 GDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANMLIELHTTKG 582
           G P LH+ +A   WKE+ Y  +  HFLHS+DG   A+ML+E  T++G
Sbjct: 134 GHPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCADMLVEYSTSRG 180


>AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating
            BIR-domain enzyme APOLLON protein.
          Length = 4829

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 508  EQLCTFFPSKILLLFSCVGVGHLFCCYPLTILLNLLERFLA 386
            EQL  F   ++ +L SC+G   L     L  LLNLL+  L+
Sbjct: 2079 EQLLIFPQDRVFMLLSCIGQRSLSNSGVLESLLNLLDNLLS 2119


>AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein.
          Length = 2793

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 508 EQLCTFFPSKILLLFSCVGVGHLFCCYPLTILLNLLERFLA 386
           EQL  F   ++ +L SC+G   L     L  LLNLL+  L+
Sbjct: 43  EQLLIFPQDRVFMLLSCIGQRSLSNSGVLESLLNLLDNLLS 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,921,619
Number of Sequences: 237096
Number of extensions: 1729076
Number of successful extensions: 2932
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2930
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)