Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f22f
         (587 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001480-1|AAN71235.1|  339|Drosophila melanogaster LD21829p pro...   139   3e-33
AE014297-78|AAF52132.1|  339|Drosophila melanogaster CG9853-PA p...   139   3e-33

>BT001480-1|AAN71235.1|  339|Drosophila melanogaster LD21829p
           protein.
          Length = 339

 Score =  139 bits (336), Expect = 3e-33
 Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 5/173 (2%)
 Frame = +1

Query: 79  GERGVVRVLDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERDQ 258
           G+RGV RVL KL  S+  G++YEAH MYRTLYFRY  QK+Y +              ++Q
Sbjct: 18  GQRGVSRVLAKLSQSLAGGEFYEAHMMYRTLYFRYTAQKRYQDCLELLFDGAQQLIAKEQ 77

Query: 259 QGSGADLAILFVEVLTK----SETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSM 426
           + S ADL +L V+ L K    +E   N  WV +L  L   ++S+  ERET +  +IKWS 
Sbjct: 78  ESSAADLCLLLVDTLEKRGPQAEDTDNFLWVPRLGALIRGLNSATVERETLIQRTIKWST 137

Query: 427 D-NNKKGDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANMLIELHTTKG 582
             + + G P+LHK IA VFW E    +A  H+L   DGS    +LIE+  ++G
Sbjct: 138 ALHGQYGHPVLHKLIAHVFWTEGNIESARHHYLLCQDGSLCGRVLIEISQSRG 190


>AE014297-78|AAF52132.1|  339|Drosophila melanogaster CG9853-PA
           protein.
          Length = 339

 Score =  139 bits (336), Expect = 3e-33
 Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 5/173 (2%)
 Frame = +1

Query: 79  GERGVVRVLDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERDQ 258
           G+RGV RVL KL  S+  G++YEAH MYRTLYFRY  QK+Y +              ++Q
Sbjct: 18  GQRGVSRVLAKLSQSLAGGEFYEAHMMYRTLYFRYTAQKRYQDCLELLFDGAQQLIAKEQ 77

Query: 259 QGSGADLAILFVEVLTK----SETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSM 426
           + S ADL +L V+ L K    +E   N  WV +L  L   ++S+  ERET +  +IKWS 
Sbjct: 78  ESSAADLCLLLVDTLEKRGPQAEDTDNFLWVPRLGALIRGLNSATVERETLIQRTIKWST 137

Query: 427 D-NNKKGDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANMLIELHTTKG 582
             + + G P+LHK IA VFW E    +A  H+L   DGS    +LIE+  ++G
Sbjct: 138 ALHGQYGHPVLHKLIAHVFWTEGNIESARHHYLLCQDGSLCGRVLIEISQSRG 190


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,910,591
Number of Sequences: 53049
Number of extensions: 521450
Number of successful extensions: 1100
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)