Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f21r
         (649 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC054497-1|AAH54497.1| 2141|Homo sapiens CABIN1 protein protein.       33   1.2  
BC041659-1|AAH41659.1|  407|Homo sapiens Similar to calcineurin ...    33   1.2  
BC028969-1|AAH28969.1|  407|Homo sapiens CABIN1 protein protein.       33   1.2  
AF072441-1|AAD40846.1| 2220|Homo sapiens calcineurin binding pro...    33   1.2  
AB002328-1|BAA20788.2| 2224|Homo sapiens KIAA0330 protein.             33   1.2  

>BC054497-1|AAH54497.1| 2141|Homo sapiens CABIN1 protein protein.
          Length = 2141

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 494 IRCGPDHYLCIXNIVFVLFT 435
           +RC PDH+ C+ N++ VL+T
Sbjct: 151 LRCNPDHWPCLDNLITVLYT 170


>BC041659-1|AAH41659.1|  407|Homo sapiens Similar to calcineurin
           binding protein 1 protein.
          Length = 407

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 494 IRCGPDHYLCIXNIVFVLFT 435
           +RC PDH+ C+ N++ VL+T
Sbjct: 151 LRCNPDHWPCLDNLITVLYT 170


>BC028969-1|AAH28969.1|  407|Homo sapiens CABIN1 protein protein.
          Length = 407

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 494 IRCGPDHYLCIXNIVFVLFT 435
           +RC PDH+ C+ N++ VL+T
Sbjct: 151 LRCNPDHWPCLDNLITVLYT 170


>AF072441-1|AAD40846.1| 2220|Homo sapiens calcineurin binding
           protein cabin 1 protein.
          Length = 2220

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 494 IRCGPDHYLCIXNIVFVLFT 435
           +RC PDH+ C+ N++ VL+T
Sbjct: 151 LRCNPDHWPCLDNLITVLYT 170


>AB002328-1|BAA20788.2| 2224|Homo sapiens KIAA0330 protein.
          Length = 2224

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 494 IRCGPDHYLCIXNIVFVLFT 435
           +RC PDH+ C+ N++ VL+T
Sbjct: 155 LRCNPDHWPCLDNLITVLYT 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,854,692
Number of Sequences: 237096
Number of extensions: 1330248
Number of successful extensions: 1232
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)