Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f21f
         (541 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    72   1e-14
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         24   3.7  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   5.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.5  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   6.5  
AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione S-tran...    23   6.5  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   8.7  

>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.
          Length = 56

 Score = 72.1 bits (169), Expect = 1e-14
 Identities = 31/53 (58%), Positives = 43/53 (81%)
 Frame = +1

Query: 241 ELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 399
           EL++R+DG+ IQ  L +LTG RTVP+VFI GN VGGG+D+K +Y+ G+L+ ML
Sbjct: 3   ELDKRNDGDEIQSVLGELTGARTVPRVFIGGNFVGGGTDIKKMYDDGRLQKML 55


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 108 YRHSTVYQGSYLQRQSCSVLQILLS 182
           +RH   Y  +Y Q +SC + Q+ +S
Sbjct: 320 HRHPFQYHPTYDQHKSCRIQQLYVS 344


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 17/72 (23%), Positives = 36/72 (50%)
 Frame = +3

Query: 285 RTTDWFQNCTSSLYKWQLCGRWL*C*SIV*IWKIRTYVNRINFKLIVLLLFAYLNLYFGV 464
           + T++      +LY W+LC RW+   + + ++ I  Y N +  + ++   + Y  + +G+
Sbjct: 522 KDTEFMLGHRPNLY-WRLCWRWI---TPLLMFVILIY-NLVTLEPLMYRQYVYPTVAYGI 576

Query: 465 HIKCYLRFKLIQ 500
              C   F L+Q
Sbjct: 577 G-WCIFAFGLLQ 587


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 74  EKLRVHLKWPDL*TFNSLSRKLSPK 148
           EK   HL W DL TF  + +  + K
Sbjct: 9   EKCLAHLGWSDLDTFVQIKQHYTTK 33


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 74  EKLRVHLKWPDL*TFNSLSRKLSPK 148
           EK   HL W DL TF  + +  + K
Sbjct: 9   EKCLAHLGWSDLDTFVQIKQHYTTK 33


>AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 229

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 298 QSVVRDYLEWCFHHHVHST 242
           Q++V +YLEW  HH+  +T
Sbjct: 94  QALVDEYLEW-QHHNTRAT 111


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -3

Query: 392 GSNFPDSYNALTSEPPPTQLP-FIKT*GTVLKPVSCAR 282
           G  F D Y++   +P P+  P F K   TV    +C+R
Sbjct: 57  GQEFVDDYDSYDDQPEPSDEPVFEKNVSTV---ATCSR 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,779
Number of Sequences: 2352
Number of extensions: 10453
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)