Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f19r
(770 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 451 e-126
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 439 e-122
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 236 e-116
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 389 e-107
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 239 9e-91
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 331 1e-89
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 294 2e-78
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 294 2e-78
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 291 1e-77
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 281 2e-74
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 280 2e-74
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 184 2e-45
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 144 2e-33
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 134 2e-30
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 134 3e-30
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 129 7e-29
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 124 2e-27
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 121 2e-26
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 118 2e-25
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 116 5e-25
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 115 2e-24
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 113 3e-24
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 113 5e-24
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 111 2e-23
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 106 5e-22
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 106 5e-22
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 105 1e-21
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 103 4e-21
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 103 5e-21
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 94 4e-18
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 91 3e-17
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 87 5e-16
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 83 1e-14
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 80 7e-14
UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransfera... 41 0.039
UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1; ... 41 0.039
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 40 0.052
UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_030005... 38 0.37
UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2; ... 38 0.37
UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular ... 37 0.48
UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: V... 37 0.64
UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.84
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 36 1.1
UniRef50_UPI00005A603F Cluster: PREDICTED: hypothetical protein ... 36 1.1
UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacill... 36 1.5
UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=... 36 1.5
UniRef50_Q0S5H2 Cluster: Undecaprenyl-phosphate galactose phosph... 35 1.9
UniRef50_A0VC89 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_A2QWA3 Cluster: Contig An11c0170, complete genome; n=3;... 35 1.9
UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox p... 35 2.6
UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens "Keratin... 35 2.6
UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4... 35 2.6
UniRef50_A5P378 Cluster: Putative uncharacterized protein; n=3; ... 35 2.6
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 34 3.4
UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: L... 34 3.4
UniRef50_A7CME0 Cluster: Putative uncharacterized protein precur... 34 3.4
UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis t... 34 3.4
UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p... 34 3.4
UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 3.4
UniRef50_UPI0000DB6DB9 Cluster: PREDICTED: hypothetical protein;... 34 4.5
UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family prote... 34 4.5
UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing pr... 33 5.9
UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1; Psychroba... 33 5.9
UniRef50_Q9M7I5 Cluster: Arabinogalactan protein; n=1; Zea mays|... 33 5.9
UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa... 33 5.9
UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_Q9P557 Cluster: Related to merozoite surface antigen 2;... 33 5.9
UniRef50_P04929 Cluster: Histidine-rich glycoprotein precursor; ... 33 5.9
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 7.9
UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa... 33 7.9
UniRef50_Q01J77 Cluster: OSIGBa0152K17.10 protein; n=5; Oryza sa... 33 7.9
UniRef50_A2YUS0 Cluster: Putative uncharacterized protein; n=2; ... 33 7.9
UniRef50_Q8T3A0 Cluster: Putative coagulation serine protease; n... 33 7.9
UniRef50_Q8IQK7 Cluster: CG32132-PA; n=2; Drosophila melanogaste... 33 7.9
UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene pro... 33 7.9
UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmod... 33 7.9
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 451 bits (1112), Expect = e-126
Identities = 206/254 (81%), Positives = 229/254 (90%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
KKHLKRL PKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV
Sbjct: 6 KKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIV 65
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCK 125
Query: 410 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 231
VK+ G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+SGNLCMITG
Sbjct: 126 VKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITG 185
Query: 230 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR 51
GRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K YISLP+GKG++
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 50 LTIAEERDKRIAAK 9
L+IAEERDKR+AAK
Sbjct: 246 LSIAEERDKRLAAK 259
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 439 bits (1082), Expect = e-122
Identities = 196/254 (77%), Positives = 227/254 (89%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
KKHLKR+ PK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 410 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 231
V+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 230 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR 51
G NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K +ISLPRGKGIR
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 50 LTIAEERDKRIAAK 9
LTIAEERDKR+AAK
Sbjct: 246 LTIAEERDKRLAAK 259
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 236 bits (577), Expect(2) = e-116
Identities = 100/140 (71%), Positives = 126/140 (90%)
Frame = -1
Query: 428 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 249
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 248 LCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 69
+CM+TGG NLGR+G I +RERHPGSFD+VH+KDSTG++FATRL+N+F+IGKG K ++SLP
Sbjct: 212 MCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLP 271
Query: 68 RGKGIRLTIAEERDKRIAAK 9
RGKGIRLTIAEERDKR+AAK
Sbjct: 272 RGKGIRLTIAEERDKRLAAK 291
Score = 204 bits (499), Expect(2) = e-116
Identities = 94/115 (81%), Positives = 102/115 (88%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
KKHLKR+ PK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 426
QR IK+DGKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 66 MQRFIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 389 bits (958), Expect = e-107
Identities = 177/256 (69%), Positives = 213/256 (83%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
KKHLKRLN PK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT EV+ I+
Sbjct: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISIL 65
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
QR I+VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 410 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 231
V+ + G K +PYL T+DGRTIRYPDPLIK ND+I+LD+ KI++FIKF+ GN+ M+TG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 185
Query: 230 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR 51
GRN GRVG I +RE+H GSF+ +HI+DSTGH FATRL NV+ IGKGTK ++SLP+GKGI+
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 245
Query: 50 LTIAEERDKRIAAKVA 3
LTI EE KR+A++ A
Sbjct: 246 LTIIEEARKRLASQQA 261
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 239 bits (585), Expect(2) = 9e-91
Identities = 102/151 (67%), Positives = 128/151 (84%)
Frame = -1
Query: 476 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLD 297
D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 296 IATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLN 117
+ T KI DF KF++GNLCM+TGG NLGR+G I +RE HPGSFD+VH+KD+ G++FATRL+
Sbjct: 136 LETGKITDFFKFDTGNLCMVTGGTNLGRIGVITNRENHPGSFDVVHVKDANGNSFATRLS 195
Query: 116 NVFIIGKGTKAYISLPRGKGIRLTIAEERDK 24
N+F+IGKG +ISLP GKGIR TIAEE+ +
Sbjct: 196 NIFVIGKGNIPWISLPHGKGIRFTIAEEKKR 226
Score = 118 bits (283), Expect(2) = 9e-91
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
+KHLK + PK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 RKHLKHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIR 65
Query: 590 KQRLIKVDGK 561
Q IK+DGK
Sbjct: 66 MQHFIKMDGK 75
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 331 bits (814), Expect = 1e-89
Identities = 146/251 (58%), Positives = 192/251 (76%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
+ HLKRLN P WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G EV IV
Sbjct: 6 RHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIV 65
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
K R IK+DGK+RTD YP GFMDV+SI +T E FRL+Y+ K RF + +T E+AK+KLCK
Sbjct: 66 KNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCK 125
Query: 410 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 231
+++ G +PY+VTHDGRTIRYP P ++ ND+I+L++ T KI+DF+KF+ GN M+ G
Sbjct: 126 IEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIG 185
Query: 230 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR 51
G +GRVG IV RE HPGSF+IVHIKD+ G+TF TRLNNVF+IGKGT+ ++LP KGI+
Sbjct: 186 GNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIK 245
Query: 50 LTIAEERDKRI 18
+ ++ ++ I
Sbjct: 246 KPLLQQVNETI 256
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 294 bits (721), Expect = 2e-78
Identities = 136/249 (54%), Positives = 184/249 (73%), Gaps = 1/249 (0%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
KKH KRLN PK W+L+KLGG++APR S+GPHK + +PLVI +RN+LKY+ E L I+
Sbjct: 6 KKHYKRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNIL 65
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
K+ I VDGKVR D +PAG MDV+SI+ T E +R++YD G F +HRIT +E+ +KLCK
Sbjct: 66 KKNEIYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCK 125
Query: 410 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 231
V RV+ G K +PY+VTHDGRTIR+P+ LIK NDSI LD+ K++DFIKF G+LC++
Sbjct: 126 VIRVSIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVVIK 185
Query: 230 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR 51
G N+GR+G ++ GS IV +KD G +F+T+ N+F+IGKGTK++ISLPR +G+R
Sbjct: 186 GSNIGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPRFRGLR 245
Query: 50 -LTIAEERD 27
LT + E D
Sbjct: 246 TLTKSLEHD 254
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 294 bits (721), Expect = 2e-78
Identities = 134/243 (55%), Positives = 178/243 (73%)
Frame = -1
Query: 764 HLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 585
HLKRL P W+L K G +A PSTGPHKLRECLP+ IFLR+RLKYALT E + IVK+
Sbjct: 22 HLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKR 81
Query: 584 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 405
RL+KVDGKVRT+ YP G MDV+ + K+NELFR+IYD KGRF +H I +EA +KL +V
Sbjct: 82 RLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVN 141
Query: 404 RVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGR 225
+ G K +P++VTHDGRTI Y DP ++V+D+++ +I T ++ IKF+ G++ M+T G
Sbjct: 142 QFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGG 201
Query: 224 NLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLT 45
N+GRVGTI E+ SFDIVH+KD++G FATR+ NVF+IG+ ISLP +G+R +
Sbjct: 202 NVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPS 261
Query: 44 IAE 36
I E
Sbjct: 262 ILE 264
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 291 bits (714), Expect = 1e-77
Identities = 139/234 (59%), Positives = 175/234 (74%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
K+HLKR+ + WMLDKL GV+A RPSTGPHKLRECLP IFLRNRLKYALTG+EV KI
Sbjct: 17 KQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPH-IFLRNRLKYALTGDEVKKIC 75
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
Q IKVDGK+RTD P MDV+SI+K E F LIY + RF +HRITPEE KYKLCK
Sbjct: 76 MQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCK 135
Query: 410 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 231
++++ K +P+LV HD T+R+PD LIKVND+IQ+D+ T KI +KF++GNLC++TG
Sbjct: 136 MRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKI-TALKFDTGNLCLVTG 194
Query: 230 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 69
G N GR+G I +RERHP SFD H+KD+ ++F+ +F+I KG K +ISLP
Sbjct: 195 GGNWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 281 bits (688), Expect = 2e-74
Identities = 132/257 (51%), Positives = 173/257 (67%), Gaps = 1/257 (0%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
KKHLKRL PK WML KL GV+APRP GPHKLRECLPL++ +RNRLKYAL E I+
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
+Q L+ VD R D YPAGFMDVV I KT + FRL+YDVKGRF + ++ EA+ KL K
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMK 122
Query: 410 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 231
V + T VP VTHDG IRYPDP + D+I ++ K +D IK G ++TG
Sbjct: 123 VVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTG 182
Query: 230 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG-TKAYISLPRGKGI 54
G N GR+G IV E HPG+F+I H+KD++G FATR N+F+IGK +++P+ +G+
Sbjct: 183 GANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGL 242
Query: 53 RLTIAEERDKRIAAKVA 3
R+ + +ER++R+ A A
Sbjct: 243 RMNVIQEREERLIAAEA 259
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 280 bits (687), Expect = 2e-74
Identities = 141/283 (49%), Positives = 185/283 (65%), Gaps = 31/283 (10%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLD-------------------------KLGGVY----APRPSTGPH 678
KKHLKR+N PK+WML+ KL +Y A RPS GPH
Sbjct: 87 KKHLKRINAPKSWMLNKLGGIWVITFFAFRLRKNDFITTIPKLKFIYFKKQATRPSQGPH 146
Query: 677 KLRECLPLVIFLRNRLKYALTGNEVLKIV--KQRLIKVDGKVRTDPTYPAGFMDVVSIEK 504
KLRE LPL + L+ RL YAL G +V I+ K++ + VDGKVR D YP G MDVV IEK
Sbjct: 147 KLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRIEK 206
Query: 503 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 324
T++ FR++YD KGRF + ++ EEAKYKL KV A GP +PY+VTHD RTIR+P+P I
Sbjct: 207 TDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEI 266
Query: 323 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDST 144
K+ D+++ D+ KI +F ESGN+C I G N+GRVG I E+H GSFDI H+KD+
Sbjct: 267 KIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGSFDICHVKDAK 326
Query: 143 GHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIA 15
G+ FATRL N+F++G+G K++I LP G G+R TI EER ++ +
Sbjct: 327 GNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEERKRKFS 369
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 184 bits (448), Expect = 2e-45
Identities = 93/256 (36%), Positives = 158/256 (61%), Gaps = 1/256 (0%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
+ HLKR PK+WMLDK GG +A P++GPHK EC+PL + L+YA E+ I+
Sbjct: 6 RDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIIL 65
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
++ IKV+G+VRT+ +P G DVVSIEKT E FR++Y+V +F +HRI+ EEA Y+L K
Sbjct: 66 AEKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTK 125
Query: 410 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 231
V + + +PY+V+ G +IR+ DP I + +I++ T+K++++I + ++
Sbjct: 126 VTKKYEN-QGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSR 184
Query: 230 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK-AYISLPRGKGI 54
G+ GRVG +++ G + + D G+TF+ + +IG+ ++ +I+LP+ +GI
Sbjct: 185 GKARGRVG-VINTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGI 243
Query: 53 RLTIAEERDKRIAAKV 6
R + E+ + ++ +
Sbjct: 244 RQSELEKINAQLGEMI 259
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 144 bits (350), Expect = 2e-33
Identities = 88/246 (35%), Positives = 134/246 (54%), Gaps = 10/246 (4%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
++ LK L P+ W + + +A +P GPH + LPL++ +RN L YA T E K++
Sbjct: 7 QRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLI 66
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFTIHRITPEEAKYKLC 414
+ +VDG VR D +P GFMDV+ + T E FR++ Y VK F +H I EE K
Sbjct: 67 SEGHFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFKLHPIPEEEGDLKPV 125
Query: 413 KVKRVATGPKNVPYLVTHDGRTI--RYPDP------LIKVNDSIQLDIATTKIMDFIKFE 258
+++ T L HDGR I R DP + + D++ + + +I IKF
Sbjct: 126 RIENKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFG 185
Query: 257 SGNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGKGTKAY 81
G + +I GGRN+GRVG + S ++ G +V ++D++G+ F T L+ VF+IG +
Sbjct: 186 EGAIAIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPV 244
Query: 80 ISLPRG 63
ISLP G
Sbjct: 245 ISLPEG 250
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 134 bits (324), Expect = 2e-30
Identities = 81/241 (33%), Positives = 125/241 (51%), Gaps = 16/241 (6%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 594
K+H+KRL P AW + K GG +APRP GPH + +PL+I +R+ L YA E KI
Sbjct: 9 KRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKI 68
Query: 593 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 414
+ + I VDG VR +P +P G MDVV I +T + +R++ + R + I+ EEA+ K+C
Sbjct: 69 ITRGEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVC 128
Query: 413 KVKRVATGPKNVPYLVTHDGRT--IRYPDP------LIKVNDSIQLDI------ATTKIM 276
++K + HDG+ + DP + V DS+ L++ + K++
Sbjct: 129 RIKNKTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWKVV 188
Query: 275 DFIKFESGNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIG 99
D I FE G GR+ G VG +V + G D++ +++ G F T + IG
Sbjct: 189 DHIPFEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIAIG 248
Query: 98 K 96
K
Sbjct: 249 K 249
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 134 bits (323), Expect = 3e-30
Identities = 81/235 (34%), Positives = 123/235 (52%), Gaps = 10/235 (4%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
+KHLKRL P W L + + RPS GPH + + LPL++ +R+ LKYA E KI+
Sbjct: 7 RKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKII 66
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
+ I +DG R + +PAG MDV+SI + +E + +++D GR ++ + ++ KLCK
Sbjct: 67 QTGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKK--TDKTDVKLCK 124
Query: 410 V--KRVATGPKNVPYLVTHDGR--------TIRYPDPLIKVNDSIQLDIATTKIMDFIKF 261
+ K V G N+ L HDGR + + + K DS+ + I I + F
Sbjct: 125 IVNKTVVKG-GNI-QLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAF 182
Query: 260 ESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 96
G L ITGG+++G IV E DIV +++ G F T VFI+G+
Sbjct: 183 GEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 129 bits (312), Expect = 7e-29
Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 4/237 (1%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
+KHLK PK W + + +PS G H + L L + +R+ LK A E +I+
Sbjct: 7 RKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRII 66
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
+ VDG+V D +P GFMD++ I KT E++R++ D KGR +++I EE KLCK
Sbjct: 67 NSGNVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCK 124
Query: 410 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 231
+ +T + HDG+ + + V D I L + +I + + + G +ITG
Sbjct: 125 IVNKSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLITG 184
Query: 230 GRNLGRVGT----IVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 72
G++ G +GT IV+ +P + + I++S F T + F++G+ A ISL
Sbjct: 185 GKHTGELGTVSEIIVNESSNPNT---IIIENSAKDEFLTLKDYAFVVGEDAPA-ISL 237
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 124 bits (300), Expect = 2e-27
Identities = 75/233 (32%), Positives = 118/233 (50%), Gaps = 9/233 (3%)
Frame = -1
Query: 767 KHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 588
+HL+R P W + + V+ +PS GPH L +P+ I LR+ YA T E +I+
Sbjct: 10 RHLRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILA 69
Query: 587 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 408
R+I+VDG+V TD +P G MDV+ I + +R++ D + I PEEA YKL ++
Sbjct: 70 SRVIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQI 129
Query: 407 KRVATGPKNVPYLVTHDGRTI-------RYPDPL-IKVNDSIQLDIATTKIMDFIKFESG 252
+R T HDGR + Y + K D++ + I I+ + FE G
Sbjct: 130 RRKMTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPRQSIVSHVPFEVG 189
Query: 251 NLCMITGGRNLGRVGTI-VSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 96
L ++ GRN+G +G I ++ S +V ++D++G T L V +GK
Sbjct: 190 TLAIVVDGRNVGFMGRINAIQQVFKRSRALVELEDASGAKSRTILQYVLPVGK 242
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 121 bits (292), Expect = 2e-26
Identities = 70/226 (30%), Positives = 110/226 (48%), Gaps = 3/226 (1%)
Frame = -1
Query: 764 HLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 585
HL+R P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ +
Sbjct: 3 HLRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGK 62
Query: 584 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 405
+KVDGKVR D YP G MDV+ + NE +R+I D RI EA K+C+++
Sbjct: 63 GYVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIE 122
Query: 404 RVATGPKNVPYLVTHDGRTI---RYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMIT 234
L HDGR I + + S+ +++ K+MD+ + +
Sbjct: 123 DKTMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAF 182
Query: 233 GGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 96
G N+GR GT+++ R D + + F T LN + +IGK
Sbjct: 183 NGVNVGRHGTLINWVRSFRKRDAIATVKAKDSEFRTVLNYLLVIGK 228
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 118 bits (284), Expect = 2e-25
Identities = 73/231 (31%), Positives = 116/231 (50%), Gaps = 1/231 (0%)
Frame = -1
Query: 758 KRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 579
KRL + + + + P P+ G H + + L+ +R+ LK + E +I+ L
Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGL 65
Query: 578 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 399
+KVDGK + + GFMDV+ I E +R++Y+ +G + + T E A KL KV+
Sbjct: 66 VKVDGKTVREKKFAVGFMDVIEIN--GESYRVVYNDQGALVLMKETKERASMKLLKVRSK 123
Query: 398 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 219
P N L THDGRT D KV D + + KI + IK + GN IT G ++
Sbjct: 124 VIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHV 183
Query: 218 GRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 69
+ GTI E G S ++VH ++ F+T ++VF+IG +++ P
Sbjct: 184 NQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSP 230
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 116 bits (280), Expect = 5e-25
Identities = 61/233 (26%), Positives = 114/233 (48%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 591
KKH KR++ K G++ + S+GPH + + L+ ++ A E K+V
Sbjct: 6 KKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVV 65
Query: 590 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 411
K + V+GK +P MD +S N+ +R++ G+ T++ I E K+CK
Sbjct: 66 KTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICK 125
Query: 410 VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITG 231
V ++ ++T D R ++ IKV DS+ + +I+ +KFE G+LC+IT
Sbjct: 126 VIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITR 185
Query: 230 GRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 72
G++LG + I + ++H++ G + +++ +IG+ + +SL
Sbjct: 186 GKHLGTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 115 bits (276), Expect = 2e-24
Identities = 70/192 (36%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Frame = -1
Query: 764 HLKRLNXPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 588
HL+R P W + K GGV+ RPS GPH L LPL + +R+ LKYA T +E I+
Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIIS 62
Query: 587 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 408
+ +KVDG VR D +P G MDV+ I T E++R++ D + + I+ EEA KL +V
Sbjct: 63 RGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRV 122
Query: 407 KRVATGPKNVPYLVTHDGR---TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 237
+ L HDGR T IK DS+ D+ I I + G ++
Sbjct: 123 EGKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVV 182
Query: 236 TGGRNLGRVGTI 201
G N+G GT+
Sbjct: 183 IHGSNVGFSGTL 194
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 113 bits (273), Expect = 3e-24
Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 7/235 (2%)
Frame = -1
Query: 767 KHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 588
K+LKRL P +W + K + + + GPH LP+ ++LR + A +EV KI+
Sbjct: 3 KYLKRLVAPGSWHIPKKVQKFVMKTAPGPHNAG-ALPVGVWLREHIGLAQNASEVKKILH 61
Query: 587 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 408
QR + V+G+ D G D+VSI K + +R+ DVKG I E AK +LCK+
Sbjct: 62 QRDVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKI 121
Query: 407 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATT-----KIMDFIKFESGNLC 243
+ T L G + D K DS+ + + T +I+D + GN+
Sbjct: 122 RNKTTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVA 180
Query: 242 MITGGRNLGRVGTIVSRERHPGSF--DIVHIKDSTGHTFATRLNNVFIIGKGTKA 84
MI GG++ G+VG IV R S ++ DS G F T VF++G+ A
Sbjct: 181 MIVGGKHSGKVGRIVEIIRTASSVPNHVILTDDSAGERFETIEEYVFMVGRSAIA 235
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 113 bits (272), Expect = 5e-24
Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Frame = -1
Query: 764 HLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 585
H KRL+ PK+W + + G + GPH LPL + +R+ LK E +I+ +
Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSE 62
Query: 584 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 405
+ VDG R D +P G DV+++ NE +R++ D KGR ++++ E KLC++
Sbjct: 63 GKVLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRIN 121
Query: 404 RVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGR 225
T L +DG I + DS+ L I ++ +KFE GNL M+ GG+
Sbjct: 122 NKTTVKGGKIQLNLNDGTNILGSND-YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQ 180
Query: 224 NLGRVGTIVS-RERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 96
+ G G I+ RE + V I T F T + V +IG+
Sbjct: 181 HSGETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE 222
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 111 bits (266), Expect = 2e-23
Identities = 68/227 (29%), Positives = 108/227 (47%)
Frame = -1
Query: 764 HLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 585
HLKR+ P+ W + + + +P G H +PLV+ LR+ LK A +E+ KI+ +
Sbjct: 5 HLKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHE 64
Query: 584 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 405
+ VDGKVR D Y G D +SI N +R++ + G+F H + +A K+CK+
Sbjct: 65 GKVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF--HLVPVTDASAKICKIV 122
Query: 404 RVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGR 225
L HDG T+ + K DS+ L + KI + G+L M+T G+
Sbjct: 123 NKTALRGGKIQLNLHDGTTMIASND-YKTKDSVILKMPERKIDQHFTYAVGSLVMVTEGK 181
Query: 224 NLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKA 84
+ G +G + + S + + F T VF+IGK + A
Sbjct: 182 HSGEIGKVKEIKVVRSSAPNTVVITTPEGDFETIEQYVFVIGKDSPA 228
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 106 bits (255), Expect = 5e-22
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Frame = -1
Query: 764 HLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 585
H+KRL P++W L + ++ +P+ G H C+PL + LR+ L A E +++
Sbjct: 5 HMKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLAT 64
Query: 584 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 405
R + VDG++ TD G MDV+++ + + FR I DV G+ I+ + A KLC+V
Sbjct: 65 RQVLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCRVM 122
Query: 404 RVATGPKNVPYLVTHDGRTIRYPD-PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 228
+T + HDGR I D L D++ + + + F G +TGG
Sbjct: 123 GKSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLTGG 182
Query: 227 RNLGRVGTIVSRE-RHPGSFDIVHIKDSTGHTFATRLNNVFIIG 99
++G +VSR+ + + V D F T + VFIIG
Sbjct: 183 SHIGITAKVVSRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 106 bits (255), Expect = 5e-22
Identities = 75/231 (32%), Positives = 108/231 (46%), Gaps = 8/231 (3%)
Frame = -1
Query: 764 HLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 585
H+ R P + K + R GPHK++E +PL I L+ LK T E +I+
Sbjct: 3 HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFD 62
Query: 584 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 405
+ VDGKVR D YP G MDVV I + R+I D T I+ E+AKYK ++
Sbjct: 63 GKVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIM 122
Query: 404 RVATGPKNVPYLVTHDGRTIRYP-DPLIKVN----DSIQLDIATTKIMDFIKFESGNLCM 240
T V L DGR I + L + N ++++++ KI + G M
Sbjct: 123 NKTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTLTTLKIELPEQKITTAYTIKEGVYAM 182
Query: 239 ITGGRNLGRVGTI--VSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGK 96
I GGRN G G I + ++ + +V ++ G TF T L NV IG+
Sbjct: 183 IIGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLINVMAIGE 233
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 105 bits (252), Expect = 1e-21
Identities = 57/188 (30%), Positives = 95/188 (50%)
Frame = -1
Query: 764 HLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 585
H KR++ PK+W + K + GPH + +PL + LR+ L E +++ +
Sbjct: 4 HQKRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSE 63
Query: 584 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 405
+ VDG R D +P G MD+++I N +R++ D K R ++++ A KLC+++
Sbjct: 64 GNVLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRIE 122
Query: 404 RVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGR 225
+ + + +DG I DSI L + K++ IK+E GNL MI GG
Sbjct: 123 GKTSIKEGKIQMRLNDGVNI-IGSNNYNTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGS 181
Query: 224 NLGRVGTI 201
+ G VG+I
Sbjct: 182 HAGEVGSI 189
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 103 bits (248), Expect = 4e-21
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 2/192 (1%)
Frame = -1
Query: 770 KKHLKRLNXPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 594
K+HL+ L P+ W + K G + +PS GPH +P+ ++LR+ L A EV +
Sbjct: 6 KRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYL 65
Query: 593 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 414
+ + VDG+ D +P G DV++I + NE +R++ D +G+ + +I EEA K
Sbjct: 66 LNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYG 125
Query: 413 K-VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 237
K +++V+ + Y +T DGRT D K + + +I KI + I E I
Sbjct: 126 KIIRKVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYI 183
Query: 236 TGGRNLGRVGTI 201
G++ GR+G I
Sbjct: 184 IRGKHTGRIGVI 195
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 103 bits (247), Expect = 5e-21
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 2/201 (0%)
Frame = -1
Query: 695 PSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVV 516
P+ H + +P++I LR+ LK E+ +I+ ++KVDG++ D +P GFMDV+
Sbjct: 28 PTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNMVKVDGRIVKDRRFPVGFMDVL 87
Query: 515 SIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKRVATGPKNVPYLVTHDGRTIRY 339
SI+ + ++YD KG+ I + P KL K VK+ G + L HDG+TI
Sbjct: 88 SIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKKTIIGTGKI-QLGFHDGKTIVT 146
Query: 338 PDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSF-DIV 162
I +D + + I +I + +K G+ ITGG ++G + TI S E S ++V
Sbjct: 147 DRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSHVGELATIKSIEVKKSSVKNMV 206
Query: 161 HIKDSTGHTFATRLNNVFIIG 99
++ + F+T + +F++G
Sbjct: 207 YLNEG----FSTIKDYMFVVG 223
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 93.9 bits (223), Expect = 4e-18
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Frame = -1
Query: 758 KRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 579
K + P+ + + +A G HK +PL+I LR+ LK E+ +I+ L
Sbjct: 6 KIMMAPRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSL 65
Query: 578 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 399
+ VDGKV + GFMD +++ + L + YD KG+ I E KL +VK
Sbjct: 66 VMVDGKVVKERRRGIGFMDTLTVSGNDYL--VSYDRKGKLVILPKPGETKGLKLLRVKGK 123
Query: 398 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNL 219
+ HDG T+ IK DS+ + I +I+D +KF GN ITGG ++
Sbjct: 124 TYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHV 183
Query: 218 GRVGTIVSRE-RHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 69
G + TI S E + ++VH+ + F+T + VF++G K S+P
Sbjct: 184 GEIATIKSIEIKSSSGENMVHMNEG----FSTVSSYVFVMG-SPKYTFSMP 229
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 91.1 bits (216), Expect = 3e-17
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 4/224 (1%)
Frame = -1
Query: 758 KRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 579
KR+ P AW + + Y S+GPH LP+ I+LR+ +++AL EV KI+ R
Sbjct: 5 KRMTAPDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQ 63
Query: 578 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 399
+ ++G + TD D++S K ++ + ++ D KGR + I+ + AK +L KV
Sbjct: 64 VLLNGHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANK 123
Query: 398 ATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA---TTKIMDFIKFESGNLCMITGG 228
T + G + K DS+ + IA + + GN+ +I GG
Sbjct: 124 TTIKGGKTQINLTSGANF-IGEENCKGKDSLVIGIAGDDRFAVQQHFPYAVGNMAIIIGG 182
Query: 227 RNLGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVFIIG 99
++ + G +V S + V I+D+ G+ F T + V++IG
Sbjct: 183 QHTMKTGKLVEILVQESSLPNRVIIEDADGNKFETIEDYVYMIG 226
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 87.0 bits (206), Expect = 5e-16
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 2/223 (0%)
Frame = -1
Query: 764 HLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 585
H KRL+ P +W +++ + + GPH +PL+I LR+ L YA E + +
Sbjct: 4 HQKRLSVPNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNE 62
Query: 584 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVK 405
+ ++GK +D P G D+++ + E +R+ GR + I P+ A+ KL K+
Sbjct: 63 DNVLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLALTAIDPDAAQSKLGKIV 122
Query: 404 RVATGPKNVPYLVTHDGRT-IRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 228
L HDG T I D DSI + +++ ++E G L G
Sbjct: 123 TKTHVSGGDVQLGLHDGETLIVEDDQTYDAGDSIVVGNEDGEVVAHFEYEEGALVTAVDG 182
Query: 227 RNLGRVGTIVSRERHPGSF-DIVHIKDSTGHTFATRLNNVFII 102
+ G VG + + PGS + V + G F T V +I
Sbjct: 183 AHAGEVGEVEEIQVTPGSAQNNVIVSQDEGEGFETVEEYVVVI 225
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 82.6 bits (195), Expect = 1e-14
Identities = 52/189 (27%), Positives = 82/189 (43%)
Frame = -1
Query: 767 KHLKRLNXPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 588
K LKR P W + + G + G H +P + LR+ L T E K +
Sbjct: 8 KKLKRQMAPSFWGITRKGKRFVVTVHPGAHSKHRSIPSAVLLRDTLGAVSTLREAKKSIY 67
Query: 587 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 408
++VDG RT + G MDVV + T +++R++ +I E K+C+V
Sbjct: 68 SGNVEVDGVKRTSLHHGIGLMDVVELGGTGDIYRMVPSGGAILKPVKIEAAEKDRKICRV 127
Query: 407 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 228
+ + HDGR++ D + V DS + + KI+ + E G ++T G
Sbjct: 128 TSKTSISGGRTQIGFHDGRSL-ISDEKVSVGDSCLVQVPGQKILKVARMEKGAHAVVTRG 186
Query: 227 RNLGRVGTI 201
N G GTI
Sbjct: 187 TNAGSTGTI 195
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 79.8 bits (188), Expect = 7e-14
Identities = 51/151 (33%), Positives = 80/151 (52%)
Frame = +3
Query: 72 QRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAHAPQVTASRDHTQV 251
+RD RL A D EHV + R + ++ GVL VHN EG + LA D A V + DH Q
Sbjct: 43 KRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALDHPDATGVVTTGDHAQS 102
Query: 252 PGLKLDEVHNLRSCNV*LDGIVDFDKWVWIADGAAIMRYQVRNILRSGRHTLDFTQLVLS 431
++LD + +L +V +G+ D + + +GAA+++ R+ L QLVL
Sbjct: 103 ADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHALVPELLAPHLAQLVLR 162
Query: 432 LLRGDTVDCESALNIID*TKQFISLLN*DNI 524
D V ES+L ++D + FI+L + D++
Sbjct: 163 FDSLDAVHNESSLGVVDEPEVFIALFDGDDV 193
>UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 186
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/89 (30%), Positives = 44/89 (49%)
Frame = +3
Query: 9 LGCDALVPXXXXXXXXXXXXRQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMS 188
LGC L+ R+R RL LA+ EH+ Q + + G+L+V ++G +
Sbjct: 88 LGCKPLLGLFDDRQLDXLTLRKRYPRLCPLANDEHIAQTSCKFMPSGILNVDGLKGPLVL 147
Query: 189 LAGHDGAHAPQVTASRDHTQVPGLKLDEV 275
L D ++ V ++ H +P +K DEV
Sbjct: 148 LPVLDDSNTAPVPSTSHHDNIPNIKFDEV 176
>UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransferase;
n=4; Rhodospirillaceae|Rep: Predicted SAM-dependent
methyltransferase - Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264)
Length = 820
Score = 40.7 bits (91), Expect = 0.039
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = -3
Query: 159 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 4
H+G TH R + RQGH+ V AA R GHP HHR G Q R G+
Sbjct: 24 HRGDQETHDRIGPQLVPGTRQGHQAVDHAAPR-GHPQHHREGHAQGLRPIGQ 74
>UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 189
Score = 40.7 bits (91), Expect = 0.039
Identities = 24/67 (35%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +2
Query: 17 RCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSW-RRCVPWSP*CAQCRRSRDVSR 193
RC P R CP R ARC CP R RC RC P RR R +
Sbjct: 10 RCPARCPARCPARCPARCPARCPARCPARCPARCPARCPARCPAHCPNNGAARRWRPAAA 69
Query: 194 GTRWCPR 214
R PR
Sbjct: 70 ARRARPR 76
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 40.3 bits (90), Expect = 0.052
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = -1
Query: 692 STGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 513
+T P +L + + L + ++ K L E L I KQ+ +KV+ K + DPT+P D S
Sbjct: 100 NTQPRELLKVVNLDPKIMDKEKKKL--EEELDINKQQKVKVEHKKQLDPTFPRNDFDKFS 157
Query: 512 IEKTNELFRLIYDVKG 465
IE +++ L+ + KG
Sbjct: 158 IEDMDQVLNLLSNYKG 173
>UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 546
Score = 39.1 bits (87), Expect = 0.12
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -3
Query: 126 EVEQRVHNRQ---GHEGVHLAAARQGHPPHHRRGA 31
E Q+VH R+ G E +HL + HPPHHR+GA
Sbjct: 441 EYVQKVHEREMKSGEEAIHLPNSGTHHPPHHRKGA 475
>UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_03000514;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000514 - Ferroplasma acidarmanus fer1
Length = 317
Score = 37.5 bits (83), Expect = 0.37
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +3
Query: 492 QFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQDFVSGQSILQTIPQENHQGQALA 671
Q I+ N +NI + I + N P E LFH F DFVSG ++ I + + + +A
Sbjct: 50 QVINTYNDENILEIINIPDIKYNIPDAEKEILFHKFIDFVSGNKLISGIMKIMYLDRKIA 109
Query: 672 QLV 680
Q +
Sbjct: 110 QFI 112
>UniRef50_A0TIV4 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 597
Score = 37.5 bits (83), Expect = 0.37
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -3
Query: 216 ARGHH---RVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPH 46
ARG H VPR+ SR L A + G + H+V+ R G EG A A G P
Sbjct: 518 ARGRHPEAHVPRQASRHLHEAA--AVPGDQVLHQVDAFAE-RHGGEGA--ADADDGRPDQ 572
Query: 45 HRRGAGQAHRSQG 7
HR G QA + G
Sbjct: 573 HRMGVRQAEQRLG 585
>UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular
organisms|Rep: Tryptophan-rich antigen - Plasmodium
vivax
Length = 2662
Score = 37.1 bits (82), Expect = 0.48
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = -3
Query: 213 RGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHE-GVHLAAARQG--HPPH- 46
RG H P + + H H G H +H ++ VH Q H+ GVH A Q HP H
Sbjct: 376 RGVH--PEQAHQKGVHPKHAHQKGVHPKHAHQKGVHPEQAHQRGVHPEQAHQKGVHPKHA 433
Query: 45 HRRGA--GQAHR 16
H+RG QAH+
Sbjct: 434 HQRGVHPEQAHQ 445
>UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: VrrB
- Bacillus anthracis
Length = 115
Score = 36.7 bits (81), Expect = 0.64
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = -3
Query: 168 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 19
H HQG HG H H H+ QGH G H QGH HH Q H
Sbjct: 17 HQGHQGHHG-HQGH------HHHQGHHGHHGHHHHQGHHGHHGHHQQQVH 59
Score = 35.1 bits (77), Expect = 1.9
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = -3
Query: 219 GARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH----LAAARQGHP 52
G GHH H HQG HG H H +Q+VH+ GH +H L QGH
Sbjct: 34 GHHGHH----------GHHHHQGHHGHHGHH--QQQVHH-HGHHHIHPQAILYQTHQGHQ 80
Query: 51 PHHRRGAGQAHRSQ 10
HH SQ
Sbjct: 81 GHHDHHGHHGQHSQ 94
>UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 228
Score = 36.3 bits (80), Expect = 0.84
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = -3
Query: 318 QRFHPVRHCNYEDYGLHQV*VRELVYDHGRP*LGARGHHRV-PRETSRLLRHCAHQGLHG 142
Q HP+ H ++ H +R+L++ P HH + P + + L H HQ LH
Sbjct: 64 QHHHPI-HQHHHHTHQHPHHIRQLLHHIHLP-----HHHTLQPPQVTVQLHHHIHQHLHH 117
Query: 141 TH-LRHEVEQRVH-NRQGHEGVHLAAARQGHPPHHRR 37
TH L H + Q + Q H +H PHH R
Sbjct: 118 THQLHHHIHQLLQVIVQHHHPIHQHHHHTHQHPHHIR 154
>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
gallus
Length = 1119
Score = 35.9 bits (79), Expect = 1.1
Identities = 27/68 (39%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = +2
Query: 50 GGCP--CRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQ----CRR-SRDVSRGTRWC 208
GGC C C CR R RRC PWSP CAQ C + RDV +G C
Sbjct: 128 GGCEHDCVQLTANQHQCRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDV-QGAARC 185
Query: 209 PRAPSYGL 232
P Y L
Sbjct: 186 ECRPGYRL 193
>UniRef50_UPI00005A603F Cluster: PREDICTED: hypothetical protein
XP_549800; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_549800 - Canis familiaris
Length = 253
Score = 35.9 bits (79), Expect = 1.1
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -2
Query: 334 THLSKSTIPSS*TLQLRRLWTS-SSLSPGTCV*SREAVTWGAWAPSCPARDIPAPSTLCT 158
THLS +T + T LR W S ++ +PG SR T GA SC R A T CT
Sbjct: 126 THLSITTSIGA-TCALRATWASDTTCTPGATCASRATCTPGA---SCSLRATCASVTTCT 181
Query: 157 SRTPRDTPSP 128
R R T +P
Sbjct: 182 PRVMRATLTP 191
>UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 762
Score = 35.9 bits (79), Expect = 1.1
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -3
Query: 207 HHRVP-RETSRLLRHCAHQGL-HGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 34
H VP R + RH A Q H H R EQR R+G L GHP H +
Sbjct: 112 HDPVPQRRLAGRRRHRAQQPRRHHRHQRDRGEQRAAQRKGDHRRKLLEHHAGHPLHEEQ- 170
Query: 33 AGQAHRSQGRR 1
Q HR +G+R
Sbjct: 171 -RQEHRQRGQR 180
>UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 110
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = -3
Query: 327 YQSQRFHPVRHCNYEDYGLHQV*VRELVY--DHGRP*LGARGHHRVPRETSRLLRHCAHQ 154
+ + + HP+R Y G+ V++LV DH R A HR R RL + H+
Sbjct: 31 FHAFKIHPLRIA-YRT-GIDVTLVQQLVSGEDHQRLFKAALARHRKSRRDQRLHKSLRHK 88
Query: 153 GLHGTHLRHEVEQRVHNRQGHE 88
G+ L+H++EQ +G +
Sbjct: 89 GIAQAELQHKIEQDYQETKGQK 110
>UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 450
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 159 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 1
H G+ H H +Q+ H+ GH H + G PHHR S GR+
Sbjct: 287 HPGMEHHHHPHHHQQQHHSSHGHPAQHQGSG--GKQPHHRNNDSFNRNSSGRK 337
>UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacillus
anthracis
Length = 265
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = -3
Query: 168 HCAHQGLHGTHLR--HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 19
H H G HG H H H+ QGH G QGH HH Q H
Sbjct: 119 HQGHHGHHGHHHHQGHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQVH 170
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/61 (36%), Positives = 24/61 (39%)
Frame = -3
Query: 219 GARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 40
G GHH H HQG HG H H Q H QGH H GH HH+
Sbjct: 112 GHHGHHHHQGHHGHHGHH-HHQGHHGHHGHHH-HQGHHGHQGH---HHHQGHHGHHGHHQ 166
Query: 39 R 37
+
Sbjct: 167 Q 167
Score = 34.7 bits (76), Expect = 2.6
Identities = 20/70 (28%), Positives = 25/70 (35%)
Frame = -3
Query: 219 GARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 40
G +GHH H HG H H QGH+G H GH HH
Sbjct: 148 GHQGHHHHQGHHGHHGHHQQQVHHHGHHHIHPQAILYQTHQGHQGHHDHHGHHGHQGHHG 207
Query: 39 RGAGQAHRSQ 10
+ + Q + Q
Sbjct: 208 QHSQQHQQHQ 217
Score = 33.1 bits (72), Expect = 7.9
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -3
Query: 168 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 19
H HQG HG H H Q H GH H GH HH H
Sbjct: 116 HHHHQGHHGHHGHHH-HQGHHGHHGH---HHHQGHHGHQGHHHHQGHHGH 161
>UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=6;
Bacteria|Rep: Cobyrinic acid a,c-diamide synthase -
Geobacter bemidjiensis Bem
Length = 311
Score = 35.5 bits (78), Expect = 1.5
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = -3
Query: 177 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 1
+ H H+ HGT HE E R H+ HE +H GHP H G A + RR
Sbjct: 1 MCEHHNHEHSHGTD--HEHEHRHHDHHHHENLH-----HGHPHHATPQGGDAAPLEARR 52
>UniRef50_Q0S5H2 Cluster: Undecaprenyl-phosphate galactose
phosphotransferase; n=4; Bacteria|Rep:
Undecaprenyl-phosphate galactose phosphotransferase -
Rhodococcus sp. (strain RHA1)
Length = 488
Score = 35.1 bits (77), Expect = 1.9
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 108 EHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAHAPQVTASRDHTQVPGLKLDEVHNLR 287
E V+ E +RG D + V G+ + GH G H ++T + V G +LD + +L
Sbjct: 164 EGAVRILAESFARGTADGYRV--VGVCIPGHSGEHGDKITVAGRDIPVLGSELDVIDSLG 221
Query: 288 SCN 296
C+
Sbjct: 222 FCH 224
>UniRef50_A0VC89 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 511
Score = 35.1 bits (77), Expect = 1.9
Identities = 34/89 (38%), Positives = 38/89 (42%), Gaps = 17/89 (19%)
Frame = -3
Query: 234 GRP*LGAR--GHHRVPRETSRLLRHCAHQ-G----LHGTHLRHEVEQRVHNRQ----GHE 88
GR LG GHHR H HQ G LH +R QRV + Q +
Sbjct: 82 GRTHLGREQLGHHRAEHAEEHGHEHADHQLGDQQLLHRGAVRQPGIQRVEHHQVADQRAD 141
Query: 87 GVHLAA--ARQG----HPPHHRRGAGQAH 19
G H AA RQG H HH+RGAG H
Sbjct: 142 GQHAAAHAVRQGAEERHDHHHQRGAGHLH 170
>UniRef50_A2QWA3 Cluster: Contig An11c0170, complete genome; n=3;
Aspergillus|Rep: Contig An11c0170, complete genome -
Aspergillus niger
Length = 674
Score = 35.1 bits (77), Expect = 1.9
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = -3
Query: 219 GARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 40
G R HHR P L + HQ H E RVH R+ AA+ +GH
Sbjct: 65 GHRNHHRNPSFGKNLNKLQRHQSSHQIGTTTEGSARVHQRKKSAPATPAASPRGHHVRWD 124
Query: 39 RGAGQAHRSQG 7
+ HRS G
Sbjct: 125 GVLDEPHRSTG 135
>UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox
protein araucan; n=1; Apis mellifera|Rep: PREDICTED:
similar to Homeobox protein araucan - Apis mellifera
Length = 677
Score = 34.7 bits (76), Expect = 2.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 141 THLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 10
TH H+ +H+ Q H G +Q H HH G H SQ
Sbjct: 429 THPHHQQYHHLHHHQQHYGQQQQQQQQQHQHHHMPSQGHHHHSQ 472
>UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens
"Keratin-associated protein 10-4; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens
"Keratin-associated protein 10-4 - Takifugu rubripes
Length = 353
Score = 34.7 bits (76), Expect = 2.6
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 20 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQC 169
C CP R C C + RC SC C RC TS RC W P +C
Sbjct: 149 CWCPTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSC-RCPTSCWCPTYCRC 199
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +2
Query: 20 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTS-WRRCVPWSP*CAQC 169
C CP R C C RC C C RC TS W W P C
Sbjct: 179 CRCPTSCRCPTSCWCPTYCRCPTYCRCPTSCRCPTSCWCPTYCWCPTSCWC 229
Score = 34.7 bits (76), Expect = 2.6
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 20 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQC 169
C CP R C C + RC SC C RC TS RC W P +C
Sbjct: 275 CWCPTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSC-RCPTSCWCPTYCRC 325
>UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4;
cellular organisms|Rep: Parallel beta-helix repeat
protein - Oceanicola granulosus HTCC2516
Length = 3143
Score = 34.7 bits (76), Expect = 2.6
Identities = 25/71 (35%), Positives = 28/71 (39%)
Frame = -3
Query: 213 RGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 34
RGH R R R LR A G RH +R +R+ H G L A G P RRG
Sbjct: 2986 RGHRR-RRGGDRELRRLARLLAEGRRHRHRA-RRHRDREDHRGAGLGARSGGRPDGARRG 3043
Query: 33 AGQAHRSQGRR 1
RR
Sbjct: 3044 RRHPRAGDERR 3054
>UniRef50_A5P378 Cluster: Putative uncharacterized protein; n=3;
Proteobacteria|Rep: Putative uncharacterized protein -
Methylobacterium sp. 4-46
Length = 1338
Score = 34.7 bits (76), Expect = 2.6
Identities = 33/88 (37%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -3
Query: 255 RELVYDHGRP*LGARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQ-GHEGVH 79
R L RP G G R H H+G G+ LR R R G EG
Sbjct: 932 RSLARPRRRP-PGRAGRDGADRRRRAERAHARHRGAGGSRLRRH---RGGGRAVGPEG-- 985
Query: 78 LAAARQGH-PPHHRRGAGQAH-RSQGRR 1
AA R+ H PP HR GA + H R GRR
Sbjct: 986 -AAIRRAHRPPDHRCGAARRHERPAGRR 1012
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 34.7 bits (76), Expect = 2.6
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -3
Query: 213 RGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAAR-QGHPPHHRR 37
R H R R+ RH H+ H H RH ++R+H+R H G H R +GH H RR
Sbjct: 521 RHHDRHHRDHRHHDRH--HRDRH-RHDRHRHDRRLHDRHRH-GHHRHGHRLRGHRHHDRR 576
Query: 36 GAGQAHRSQGRR 1
G RR
Sbjct: 577 PRGHGLHRHDRR 588
Score = 33.9 bits (74), Expect = 4.5
Identities = 21/71 (29%), Positives = 26/71 (36%)
Frame = -3
Query: 213 RGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 34
RG R R H H H H RH ++ H+R H+ R GH H R
Sbjct: 508 RGRRRRDRHRRDHRHHDRHHRDHRHHDRHHRDRHRHDRHRHDRRLHDRHRHGHHRHGHRL 567
Query: 33 AGQAHRSQGRR 1
G H + R
Sbjct: 568 RGHRHHDRRPR 578
>UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 906
Score = 34.7 bits (76), Expect = 2.6
Identities = 32/103 (31%), Positives = 44/103 (42%)
Frame = +1
Query: 226 RPPVIIHKFPDSNLMKSIIFVVAMSNWMESLTLISGSG*RMVRPSCVTKYGTFLGPVATR 405
RPP H SN + S + A S +S+TLI +R T TF+ VA
Sbjct: 298 RPPRTAHIAQSSNPLLSRLDSTASST-SQSITLIGSDYDAYLRYQAATS--TFVASVAQT 354
Query: 406 LTLHNLYLASSGVIRWIVNLPLTS*IRRNSSLVFSIETTSINP 534
+ + SS + WI++ + I N L SI TTS P
Sbjct: 355 DNVSVCFTQSSSLGPWILDSGASDHISGNKHLFSSITTTSALP 397
>UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630024D08
product:hypothetical Histidine-rich region containing
protein, full insert sequence; n=1; Mus musculus|Rep: 3
days neonate thymus cDNA, RIKEN full-length enriched
library, clone:A630024D08 product:hypothetical
Histidine-rich region containing protein, full insert
sequence - Mus musculus (Mouse)
Length = 139
Score = 34.3 bits (75), Expect = 3.4
Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 207 HHRVPRETSR-LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGA 31
HH R LLR + G H RH +R H RQ EGV R+GHP HH
Sbjct: 57 HHLSADPAERVLLRGVSPPGEALGHQRHY--ERQHVRQHVEGVGQHGERRGHPAHHHL-- 112
Query: 30 GQAHRSQG 7
Q H +G
Sbjct: 113 -QHHEHEG 119
>UniRef50_Q1B492 Cluster: LigA; n=1; Mycobacterium sp. MCS|Rep: LigA
- Mycobacterium sp. (strain MCS)
Length = 634
Score = 34.3 bits (75), Expect = 3.4
Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = -3
Query: 207 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRV----HNRQGHEGVHLAAARQGHPPH-- 46
HHR +R RH H G R E+R+ H R H HL AAR H
Sbjct: 267 HHRPTATPARQHRHRPHVD-SGDRRRPPRERRLVLPRHGRTAHAD-HLPAARFPRQRHDV 324
Query: 45 --HRRGAGQAHRSQGRR 1
HRR G+AH+ GRR
Sbjct: 325 QPHRRLPGRAHQQCGRR 341
>UniRef50_A7CME0 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia pickettii 12D|Rep: Putative
uncharacterized protein precursor - Ralstonia pickettii
12D
Length = 533
Score = 34.3 bits (75), Expect = 3.4
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -3
Query: 234 GRP*LGARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQ-RVHNRQGHEG-VHLAAARQ 61
G+P + A HRV +E + R H+ + H+ EQ RVH R G EG + A Q
Sbjct: 317 GKPAVQALEAHRVDQERADRRRDAPHRNVQRFHVDARAEQERVHQRDGAEGHEDVFAEEQ 376
Query: 60 GH 55
H
Sbjct: 377 AH 378
>UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis
thaliana|Rep: At1g67870/T23K23_28 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 279
Score = 34.3 bits (75), Expect = 3.4
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = -3
Query: 237 HGRP*LGARG--HHRVPRETSRLLRHCAHQGLHGTHLR--HEVEQRVHNRQGHEGVHLAA 70
HG G G HH + + HQG+HG + H ++ + + H+G+H
Sbjct: 126 HGMKHQGGHGIQHHDIHGMQHQGGHGMQHQGMHGMQHQGGHGMQHQGGHGMQHQGMHGMQ 185
Query: 69 ARQGHPPHHRRGAGQAHR 16
+ GH H+ G G H+
Sbjct: 186 HQGGHGMEHQGGHGMQHQ 203
>UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p -
Drosophila melanogaster (Fruit fly)
Length = 647
Score = 34.3 bits (75), Expect = 3.4
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -3
Query: 207 HHRVPRETSRLLRHCAH-QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHP--PHHRR 37
HH+ ++ + +H H Q H H +H ++Q+ +Q H GHP PHH
Sbjct: 123 HHQQQQQHQQQQQHQQHLQQHHQAHHQHVLQQQQQQQQQHSQHQHQQQHHGHPLHPHHTH 182
Query: 36 GAGQAHRSQ 10
Q + Q
Sbjct: 183 QQQQQQQQQ 191
>UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 648
Score = 34.3 bits (75), Expect = 3.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 132 RHEVEQRVHNRQGHEGVHLAAARQ-GHPPHHRRGAGQAHRSQGRR 1
R E E+R ++ G + +R+ GH HHR G+G+ HR RR
Sbjct: 60 RREKERRKREKRRMAGRSRSGSRERGHRRHHRGGSGERHRDGRRR 104
>UniRef50_UPI0000DB6DB9 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 444
Score = 33.9 bits (74), Expect = 4.5
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -3
Query: 207 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG--HPPHHRRG 34
HH E H H+ H +H E + ++ GHE H +G H HH+
Sbjct: 278 HHHGHHEDHHHSHHQDHKHHHHEEHKHGHEHKEEHKHGHEHKHHHDHHEGHHHHEHHKHH 337
Query: 33 AGQAHR 16
A H+
Sbjct: 338 ASHEHK 343
>UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Hydrolase,
alpha/beta fold family protein - Plesiocystis pacifica
SIR-1
Length = 310
Score = 33.9 bits (74), Expect = 4.5
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -1
Query: 734 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 555
W +D LGG+ K+R LP+ +F ++ G V +V + ++ G R
Sbjct: 216 WWVDFLGGLIELGDDAKLRKIRADLPIYVFAGDQDPVGAQGKNVRALVDR--LRATGHAR 273
Query: 554 TDPT-YPAGFMDVVSIEKTNELFRLIYDVKG 465
T YP G ++++ + +++ R + D G
Sbjct: 274 VKQTLYPGGRHEMINERERDQVTRELIDWLG 304
>UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing protein
35; n=1; Xenopus tropicalis|Rep: Coiled-coil
domain-containing protein 35 - Xenopus tropicalis
Length = 957
Score = 33.5 bits (73), Expect = 5.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 177 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 37
LLRHC + T L++ Q V +++ HE + Q + PHH R
Sbjct: 893 LLRHCGPEASSETELQNTGPQVVASQKTHEKLDNLPTDQANTPHHHR 939
>UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1;
Psychrobacter sp. PRwf-1|Rep: TonB-dependent receptor -
Psychrobacter sp. PRwf-1
Length = 836
Score = 33.5 bits (73), Expect = 5.9
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = -3
Query: 204 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQ 25
HR+ R T L H H H H+ E+ H GHE GH H
Sbjct: 314 HRINRLTCGLDEHEHGAHEHHDHEEHDHEEHEHEEHGHEAHEHGHEEHGHQEHEHEHDEH 373
Query: 24 AH 19
H
Sbjct: 374 EH 375
>UniRef50_Q9M7I5 Cluster: Arabinogalactan protein; n=1; Zea
mays|Rep: Arabinogalactan protein - Zea mays (Maize)
Length = 274
Score = 33.5 bits (73), Expect = 5.9
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = +2
Query: 23 ACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPW--SP*CAQCRRSRDVSRG 196
ACP R PC + A + S P R +TS PW SP CA CR R
Sbjct: 49 ACPGTSRGSRPSPCSSTATSSTSAPGRRPRGTTTSTAWSSPWTASP-CASCREPTPRGRP 107
Query: 197 TRWCPRAPS 223
C R PS
Sbjct: 108 AP-CRRCPS 115
>UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0101400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 361
Score = 33.5 bits (73), Expect = 5.9
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 168 HCAHQGLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRR 37
H HQ LH +H + Q VH+R H R+ HP HHRR
Sbjct: 128 HLRHQHLHPSHQQQPPPPQPVHHRHRHH----VRRRRAHPRHHRR 168
>UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 471
Score = 33.5 bits (73), Expect = 5.9
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -3
Query: 168 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 7
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
>UniRef50_Q9P557 Cluster: Related to merozoite surface antigen 2;
n=1; Neurospora crassa|Rep: Related to merozoite surface
antigen 2 - Neurospora crassa
Length = 388
Score = 33.5 bits (73), Expect = 5.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 271 SSSLSPGTCV*SREAVTWGAWAPSCPARDIPAPSTLCTSRTPRDTPSP 128
S+S + T VT G P A P+P+T T+ P DTP P
Sbjct: 276 STSAAAATAAAPTNEVTDGLRKPDASAEQQPSPTTATTTTPPTDTPKP 323
>UniRef50_P04929 Cluster: Histidine-rich glycoprotein precursor;
n=2; Plasmodium lophurae|Rep: Histidine-rich
glycoprotein precursor - Plasmodium lophurae
Length = 351
Score = 33.5 bits (73), Expect = 5.9
Identities = 25/80 (31%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Frame = -3
Query: 255 RELVYDHGRP*-LGARGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH 79
R LV D P L HH P E H H H H E + H H H
Sbjct: 45 RVLVEDTVHPEHLHEEHHHHHPEE-----HHEPHHEEHHHHHPEEHHEPHHEEHHHHHPH 99
Query: 78 LAAARQGHPPHHRRGAGQAH 19
HPPHH G H
Sbjct: 100 PHHHHHHHPPHHHHHLGHHH 119
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.1 bits (72), Expect = 7.9
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -1
Query: 371 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 237
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0441900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 444
Score = 33.1 bits (72), Expect = 7.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 20 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCRRS 178
C+CP C A C+ C C T+C + C P C +C+ S
Sbjct: 337 CSCPRCSSCFNIFKCSCAGCCSSLCKCPCTTQCFSCQSSCCKRQPSCCKCQSS 389
>UniRef50_Q01J77 Cluster: OSIGBa0152K17.10 protein; n=5; Oryza
sativa|Rep: OSIGBa0152K17.10 protein - Oryza sativa
(Rice)
Length = 444
Score = 33.1 bits (72), Expect = 7.9
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 186 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 28
TSRL LR H H HG + RH++ +R R H L A G P + AG
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>UniRef50_A2YUS0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 590
Score = 33.1 bits (72), Expect = 7.9
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Frame = -3
Query: 213 RGHHR----VPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG--HP 52
RG HR P +RL RH G HG R + E + GH H G P
Sbjct: 5 RGGHRQTRGAPEAHARLPRHAPPAGGHGRGGRGQ-EGPIAIAAGHGRGHRGGGHGGPASP 63
Query: 51 PHHRRGAGQA 22
HH RG GQA
Sbjct: 64 RHHLRGRGQA 73
>UniRef50_Q8T3A0 Cluster: Putative coagulation serine protease; n=1;
Ciona intestinalis|Rep: Putative coagulation serine
protease - Ciona intestinalis (Transparent sea squirt)
Length = 1089
Score = 33.1 bits (72), Expect = 7.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 277 WTSSSLSPGTCV*SREAVTWGAWAPSCPARDIPAPSTLCTSRTPRD 140
+TS +++PG CV TWG+W P + C + +P D
Sbjct: 408 YTSIAINPGQCV-KPSWTTWGSWTPCASCSGSSSRIRFCANGSPGD 452
>UniRef50_Q8IQK7 Cluster: CG32132-PA; n=2; Drosophila
melanogaster|Rep: CG32132-PA - Drosophila melanogaster
(Fruit fly)
Length = 231
Score = 33.1 bits (72), Expect = 7.9
Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Frame = -3
Query: 351 HHPLSRPTYQSQRFHPVRHCNYEDYGLHQV*VRELVYDHGRP*LGARGHHRVPRETSRLL 172
HH + PT + Q+ P R + Q+ RE H R + H R RE
Sbjct: 111 HHQHATPTREHQQQTPTRQQQLQREQQQQL-QREQQQQHHRD---RQQHFREQREQRE-- 164
Query: 171 RHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPP---HHRRGAGQAHR 16
R H+ H H H H+R+ HE Q HP HH+ + Q H+
Sbjct: 165 REYQHEHEHEQHHHHH-----HHREHHEQHQHQHGHQHHPQHQHHHQYSSQQQHQ 214
>UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene
product-related; n=8; Eukaryota|Rep: Drosophila
melanogaster CG8797 gene product-related - Plasmodium
yoelii yoelii
Length = 2198
Score = 33.1 bits (72), Expect = 7.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 156 QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 1
QG G H++H+ E ++QGH +QG ++G GQ + QG++
Sbjct: 1207 QGQQGAHVQHQQEAHRQHQQGHGQQQGQGQQQGQ--GQQQGQGQGQQGQGQQ 1256
>UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmodium
chabaudi|Rep: Pc-fam-3 protein putative - Plasmodium
chabaudi
Length = 160
Score = 33.1 bits (72), Expect = 7.9
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = -3
Query: 168 HCAHQGLHGTHLRHEVEQRVHNRQGHE--GVHLAAARQGHPPHHRRGAGQAH 19
H H G H HL H + H+ + HE G H H HH G H
Sbjct: 97 HHEHHGHHEHHLHHAHGEHHHHGEHHEHHGHHEHHLHHAHGEHHHHGEHHHH 148
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 857,094,805
Number of Sequences: 1657284
Number of extensions: 19593674
Number of successful extensions: 68140
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 62788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67796
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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