Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f18r
(375 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 120 9e-27
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 102 2e-21
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 95 5e-19
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 83 2e-15
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 75 3e-13
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 71 9e-12
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 69 3e-11
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 62 4e-09
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 57 9e-08
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 56 2e-07
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 52 3e-06
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 46 3e-04
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 45 5e-04
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 43 0.002
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 38 0.045
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 38 0.060
UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein ORF-c4... 34 0.98
UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3; ... 33 2.3
UniRef50_Q22W61 Cluster: Putative uncharacterized protein; n=1; ... 32 3.0
UniRef50_A0DWZ0 Cluster: Chromosome undetermined scaffold_68, wh... 32 3.0
UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, wh... 31 5.2
UniRef50_Q6FVC9 Cluster: Candida glabrata strain CBS138 chromoso... 31 5.2
UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep: Lmo... 31 6.9
UniRef50_Q5CF92 Cluster: Putative uncharacterized protein; n=2; ... 31 6.9
UniRef50_A7SHI3 Cluster: Predicted protein; n=1; Nematostella ve... 31 6.9
UniRef50_UPI0000F2ADF6 Cluster: PREDICTED: hypothetical protein;... 31 9.1
UniRef50_A5FGD8 Cluster: Phage integrase family protein; n=1; Fl... 31 9.1
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 120 bits (289), Expect = 9e-27
Identities = 63/111 (56%), Positives = 74/111 (66%)
Frame = -2
Query: 335 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 156
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 155 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDQKE 3
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +K +++ +KE
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKE 111
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 102 bits (245), Expect = 2e-21
Identities = 54/110 (49%), Positives = 67/110 (60%)
Frame = -2
Query: 335 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 156
M K+KC LR + L LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 155 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDQK 6
+Q K LR Y + KYKP+DLR KKTRA+R+ LT HE ++ ++ K
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAK 110
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 94.7 bits (225), Expect = 5e-19
Identities = 50/114 (43%), Positives = 66/114 (57%)
Frame = -2
Query: 344 TVKMGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARV 165
T+ KVK +L K L+ LRV K+ G +SK +I VRK+IARV
Sbjct: 61 TMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARV 120
Query: 164 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDQKE 3
V + + LR YKNKKY PLDLR + TRA+R+ LTKHEA +K E++ +KE
Sbjct: 121 LTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQRKKE 174
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 82.6 bits (195), Expect = 2e-15
Identities = 45/102 (44%), Positives = 59/102 (57%)
Frame = -2
Query: 326 VKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 147
VK EL++K L NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 146 KMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXE 21
K + NLR YK K PLDLRAKKTRA+R+ L + ++ +
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKKTRAIRRKLNQQRFAMRSQ 178
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 75.4 bits (177), Expect = 3e-13
Identities = 46/110 (41%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = -2
Query: 329 KVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 150
K++ ELR K L RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 149 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKX-EERDQKE 3
Q+ K R YK PL+LR K TRA RK LT + +K +ER + E
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKERKRAE 131
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 70.5 bits (165), Expect = 9e-12
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = -2
Query: 335 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 156
M VK ELRT L+ LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 155 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALT-KHEAKIKXEER 15
Y+QK K+ LR YKNKK+KP +LR K T+ R L+ K +A + ++
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQK 107
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 68.9 bits (161), Expect = 3e-11
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = -2
Query: 248 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 69
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+ PLDLR K TR
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 68 AMRKALTKHEAK 33
A R+ALT +AK
Sbjct: 93 AKRRALTPQQAK 104
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 61.7 bits (143), Expect = 4e-09
Identities = 31/77 (40%), Positives = 49/77 (63%)
Frame = -2
Query: 245 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRA 66
LR KV+ G A KL +I +VRK IA+ V +++ + +++N K+ P+DLR KKTRA
Sbjct: 33 LRTVKVSAGNAQKLGRIGLVRKRIAKFLTVINEQRRNSVKNAAKSSTKLPVDLRGKKTRA 92
Query: 65 MRKALTKHEAKIKXEER 15
+R+ LT+ E K + +
Sbjct: 93 IRQRLTRSERAQKTQRQ 109
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 57.2 bits (132), Expect = 9e-08
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = -2
Query: 326 VKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 147
+K +LR K L+ LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 146 KMKVNLRNHYKNKKYK---PLDLRAKKTRAMRKALTKHEAKIKXEER 15
+ NL+ Y ++K + P LR K T R AL ++E K +
Sbjct: 65 NERSNLKMFYADRKLRCKTPKVLRTKLTHRRRLALKENEKNRKTSRQ 111
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 56.4 bits (130), Expect = 2e-07
Identities = 40/106 (37%), Positives = 53/106 (50%)
Frame = -2
Query: 347 VTVKMGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIAR 168
VTV M ++K LR ++ L+ LRVA+VTGG +KLS I+ VR A+
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALRE 162
Query: 167 VYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKI 30
Y K K PLDLR KKT A+R+ LTKH+ +
Sbjct: 163 AY-------------KKKKKSLLPLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = -2
Query: 140 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEERDQKE 3
K NL YK KKYK L LR KKTRA+R+ L+KHE + +++ Q E
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSE 88
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 45.6 bits (103), Expect = 3e-04
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = -2
Query: 248 NLRVAKVTGG-VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 72
+LR K T G V ++++ RV +K +ARV V +QK + R ++ ++ P R + T
Sbjct: 58 SLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLT 117
Query: 71 RAMRKALTKHEAKI 30
AMR LT+ + ++
Sbjct: 118 HAMRCQLTEKQKRL 131
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 44.8 bits (101), Expect = 5e-04
Identities = 30/68 (44%), Positives = 33/68 (48%)
Frame = +1
Query: 40 SCLVRALRIARVFLALKSKGXXXXXXXXXXXXXXXXW*YTM*TRAIAFLTTRILDSLEAT 219
S LV+A R+ARVF KS G W T+ AIA T IL SL
Sbjct: 418 SDLVKARRMARVFFLRKSSGWYFAPSYADRKDANCLWRITVRVCAIANRTCLILLSLPGA 477
Query: 220 PPVTLATR 243
PPVTLATR
Sbjct: 478 PPVTLATR 485
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 43.2 bits (97), Expect = 0.002
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = -2
Query: 335 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 156
MG +K EL K L L+ K A+KL++I+ R+ +ARV +
Sbjct: 1 MGHLKGKELIKKTRQELLDELAGLEKKLFELKGQKAASAAATKLTEIKNTRRDVARVKSI 60
Query: 155 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALT-KHEAKIKXEE 18
+ L+ Y K P+DLR + +++R L K+ K+ +E
Sbjct: 61 LMVSQRKALQEKYAKAKLVPIDLRKHQEKSLRNKLAPKYANKLTAQE 107
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 38.3 bits (85), Expect = 0.045
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = -2
Query: 101 KPLDLRAKKTRAMRKALTKHEAKIKXEE 18
KPLDLR KKTR +R+ L KHE ++ ++
Sbjct: 1 KPLDLRPKKTRVLRRRLNKHEESLRTKK 28
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 37.9 bits (84), Expect = 0.060
Identities = 28/76 (36%), Positives = 36/76 (47%)
Frame = -2
Query: 245 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRA 66
L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL + T
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQSKKAHTAG 70
Query: 65 MRKALTKHEAKIKXEE 18
E +I E
Sbjct: 71 STSMRRVEEQEIAAGE 86
>UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein
ORF-c40_015; n=1; Sulfolobus solfataricus|Rep: Putative
uncharacterized protein ORF-c40_015 - Sulfolobus
solfataricus
Length = 360
Score = 33.9 bits (74), Expect = 0.98
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -2
Query: 227 TGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKA-- 54
T G+ S L K ++ IV+ QK+K +L +Y+NK + K+R+ RKA
Sbjct: 183 TVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKANR 242
Query: 53 LTKHEAKIK 27
+ K+E K
Sbjct: 243 IAKYERYFK 251
>UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 819
Score = 32.7 bits (71), Expect = 2.3
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -2
Query: 248 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 69
N+RV + V SK +I ++ K + Y ++ K+ +N Y+N+K K + KT+
Sbjct: 559 NVRVYVLIKNVVSK-KQIDIMNKLEGEQKLRYKERKKIREQNLYRNEKIKDRNGNHLKTK 617
Query: 68 AMRKALTKHEAK 33
L HE K
Sbjct: 618 NEEYYLLPHEKK 629
>UniRef50_Q22W61 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 694
Score = 32.3 bits (70), Expect = 3.0
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -2
Query: 152 HQKMKVNLRNHYKNKKYKPLD---LRAKKTRAMRKALTKHEAKIKXEERDQKE 3
H+K N KNKKYK LD +AK+ + +KA H+ EE+D+ E
Sbjct: 640 HEKESQKGDNKLKNKKYKQLDQMIAKAKQKKEKKKAKKDHQ-NDDNEEKDEVE 691
>UniRef50_A0DWZ0 Cluster: Chromosome undetermined scaffold_68, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_68,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 258
Score = 32.3 bits (70), Expect = 3.0
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 197 IRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPL---DLRAKKTRAMRKALTKHEAKIK 27
I +V K Y + +K + RN K K K L D+R KK + K E+ IK
Sbjct: 17 IHLVNKVFQAKYFLIGKKKNIKQRNPQKYCKLKQLNLLDIRQKKNPQIGKLNQVQESMIK 76
Query: 26 XEERDQK 6
++ D+K
Sbjct: 77 DQKEDRK 83
>UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 485
Score = 31.5 bits (68), Expect = 5.2
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 170 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEER 15
R Y++ +Q + + L N YKN+K +R+ K +K K KIK ++
Sbjct: 280 RNYLIQNQIIILQLSNSYKNRKLSKKKIRSLKKSKKKKFKLKSILKIKKRKK 331
>UniRef50_Q6FVC9 Cluster: Candida glabrata strain CBS138 chromosome
E complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome E complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 930
Score = 31.5 bits (68), Expect = 5.2
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -2
Query: 149 QKMKVNLRN----HYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKXEER 15
QK K N N H ++KK+ PLD A+ K LTK + K EER
Sbjct: 186 QKEKANRNNTVNDHSESKKFTPLDPNTDFLVAIGKVLTKADIKNDQEER 234
>UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep:
Lmo2775 protein - Listeria monocytogenes
Length = 722
Score = 31.1 bits (67), Expect = 6.9
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 126 SKIDLHLLVIHNVNTCDSFSYNTDLGQFRSNSTSNFSNP 242
SK DL + +I+ N D FSY+++ G FR T N ++P
Sbjct: 507 SKEDLRVNIIYAENNQDYFSYDSNTGDFR---TGNITDP 542
>UniRef50_Q5CF92 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 395
Score = 31.1 bits (67), Expect = 6.9
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 215 ASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKN-KKYKPLDLRAKKTRAMRKALTKHE 39
A K V+K + + QK + N+++ K+ KK + + K + +K K E
Sbjct: 136 ADKAKTKEDVKKEVKKKDQKEGQKKEANIKDQEKDSKKETKIKDQEKDPKKDQKKDPKKE 195
Query: 38 AKIKXEERDQKE 3
KIK +E+DQK+
Sbjct: 196 TKIKDQEKDQKK 207
>UniRef50_A7SHI3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1108
Score = 31.1 bits (67), Expect = 6.9
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = -2
Query: 215 ASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTK 45
ASK SK RV R IA++ H ++ +RN N K +R K+RAM+K T+
Sbjct: 987 ASKKSKKRVGRPDIAQLMRAKHFGIQTEVRN--LNSKCLIFGVRKFKSRAMKKMQTR 1041
>UniRef50_UPI0000F2ADF6 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 744
Score = 30.7 bits (66), Expect = 9.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1
Query: 153 SPEDEGQS*KPLQKQEIQAFRFKSQEDP 70
SP+D+ QS KPL+ QEIQ +F + P
Sbjct: 480 SPKDDYQSSKPLESQEIQPQQFLKSKAP 507
>UniRef50_A5FGD8 Cluster: Phage integrase family protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Phage integrase
family protein - Flavobacterium johnsoniae UW101
Length = 386
Score = 30.7 bits (66), Expect = 9.1
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = -2
Query: 155 YHQKMKVNLRNHYKNKKYKPLDLRA-----KKTRAMRKALTKHEAK 33
YH K+K L+N YK +K + D+ A K+ + R LT EAK
Sbjct: 178 YHNKLKTTLKNAYKEQKLR-TDINAGIDSIKEQESQRNFLTLKEAK 222
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,997,427
Number of Sequences: 1657284
Number of extensions: 3943024
Number of successful extensions: 11110
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11103
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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