Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f17f
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117277-1|AAI17278.1| 775|Homo sapiens PDZD4 protein protein. 31 2.3
BC080584-1|AAH80584.1| 235|Homo sapiens PDZK4 protein protein. 31 2.3
BC002606-1|AAH02606.2| 235|Homo sapiens PDZK4 protein protein. 31 2.3
AK091444-1|BAC03666.1| 765|Homo sapiens protein ( Homo sapiens ... 31 2.3
AB103478-1|BAD16631.1| 769|Homo sapiens PDZ domain containing 4... 31 2.3
BC013031-1|AAH13031.2| 691|Homo sapiens PHLDB1 protein protein. 30 7.2
AK125783-1|BAC86289.1| 731|Homo sapiens protein ( Homo sapiens ... 30 7.2
AK074918-1|BAC11292.1| 613|Homo sapiens protein ( Homo sapiens ... 30 7.2
AK074070-1|BAB84896.1| 1326|Homo sapiens FLJ00141 protein protein. 30 7.2
AK027510-1|BAB55164.1| 402|Homo sapiens protein ( Homo sapiens ... 30 7.2
AB177859-1|BAD66837.1| 1125|Homo sapiens KIAA0638 splice variant... 30 7.2
AB094090-1|BAC76044.1| 1377|Homo sapiens DLNB07 protein. 30 7.2
AB014538-1|BAA31613.2| 1384|Homo sapiens KIAA0638 protein protein. 30 7.2
>BC117277-1|AAI17278.1| 775|Homo sapiens PDZD4 protein protein.
Length = 775
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 445 SKNRNRQLETLVREMKNKRQFMNEETLKKLFKHYSLDGKPEMIII 579
SK +Q RE + +R+FM + L+ L + + D KPE+ II
Sbjct: 683 SKEERKQHLIRAREQRKRREFMMQSRLECLREQQNGDSKPELNII 727
>BC080584-1|AAH80584.1| 235|Homo sapiens PDZK4 protein protein.
Length = 235
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 445 SKNRNRQLETLVREMKNKRQFMNEETLKKLFKHYSLDGKPEMIII 579
SK +Q RE + +R+FM + L+ L + + D KPE+ II
Sbjct: 143 SKEERKQHLIRAREQRKRREFMMQSRLECLREQQNGDSKPELNII 187
>BC002606-1|AAH02606.2| 235|Homo sapiens PDZK4 protein protein.
Length = 235
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 445 SKNRNRQLETLVREMKNKRQFMNEETLKKLFKHYSLDGKPEMIII 579
SK +Q RE + +R+FM + L+ L + + D KPE+ II
Sbjct: 143 SKEERKQHLIRAREQRKRREFMMQSRLECLREQQNGDSKPELNII 187
>AK091444-1|BAC03666.1| 765|Homo sapiens protein ( Homo sapiens
cDNA FLJ34125 fis, clone FCBBF3010012, moderately
similar to Mus musculus semaphorin cytoplasmic
domain-associated ).
Length = 765
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 445 SKNRNRQLETLVREMKNKRQFMNEETLKKLFKHYSLDGKPEMIII 579
SK +Q RE + +R+FM + L+ L + + D KPE+ II
Sbjct: 673 SKEERKQHLIRAREQRKRREFMMQSRLECLREQQNGDSKPELNII 717
>AB103478-1|BAD16631.1| 769|Homo sapiens PDZ domain containing 4
protein.
Length = 769
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 445 SKNRNRQLETLVREMKNKRQFMNEETLKKLFKHYSLDGKPEMIII 579
SK +Q RE + +R+FM + L+ L + + D KPE+ II
Sbjct: 677 SKEERKQHLIRAREQRKRREFMMQSRLECLREQQNGDSKPELNII 721
>BC013031-1|AAH13031.2| 691|Homo sapiens PHLDB1 protein protein.
Length = 691
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 412 EERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETLKK 531
EE + ++KE ++ +NR +E+ REM+ +RQ + EE ++
Sbjct: 474 EEMEKMLKEAHAE-KNRLMESREREMELRRQALEEERRRR 512
>AK125783-1|BAC86289.1| 731|Homo sapiens protein ( Homo sapiens
cDNA FLJ43795 fis, clone TESTI4000079. ).
Length = 731
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 412 EERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETLKK 531
EE + ++KE ++ +NR +E+ REM+ +RQ + EE ++
Sbjct: 514 EEMEKMLKEAHAE-KNRLMESREREMELRRQALEEERRRR 552
>AK074918-1|BAC11292.1| 613|Homo sapiens protein ( Homo sapiens
cDNA FLJ90437 fis, clone NT2RP3000838, weakly similar to
TRICHOHYALIN. ).
Length = 613
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 412 EERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETLKK 531
EE + ++KE ++ +NR +E+ REM+ +RQ + EE ++
Sbjct: 396 EEMEKMLKEAHAE-KNRLMESREREMELRRQALEEERRRR 434
>AK074070-1|BAB84896.1| 1326|Homo sapiens FLJ00141 protein protein.
Length = 1326
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 412 EERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETLKK 531
EE + ++KE ++ +NR +E+ REM+ +RQ + EE ++
Sbjct: 1109 EEMEKMLKEAHAE-KNRLMESREREMELRRQALEEERRRR 1147
>AK027510-1|BAB55164.1| 402|Homo sapiens protein ( Homo sapiens
cDNA FLJ14604 fis, clone NT2RP1000363, moderately
similar to R.norvegicus LL5 mRNA. ).
Length = 402
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 412 EERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETLKK 531
EE + ++KE ++ +NR +E+ REM+ +RQ + EE ++
Sbjct: 185 EEMEKMLKEAHAE-KNRLMESREREMELRRQALEEERRRR 223
>AB177859-1|BAD66837.1| 1125|Homo sapiens KIAA0638 splice variant 2
protein.
Length = 1125
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 412 EERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETLKK 531
EE + ++KE ++ +NR +E+ REM+ +RQ + EE ++
Sbjct: 908 EEMEKMLKEAHAE-KNRLMESREREMELRRQALEEERRRR 946
>AB094090-1|BAC76044.1| 1377|Homo sapiens DLNB07 protein.
Length = 1377
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 412 EERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETLKK 531
EE + ++KE ++ +NR +E+ REM+ +RQ + EE ++
Sbjct: 1149 EEMEKMLKEAHAE-KNRLMESREREMELRRQALEEERRRR 1187
>AB014538-1|BAA31613.2| 1384|Homo sapiens KIAA0638 protein protein.
Length = 1384
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 412 EERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETLKK 531
EE + ++KE ++ +NR +E+ REM+ +RQ + EE ++
Sbjct: 1156 EEMEKMLKEAHAE-KNRLMESREREMELRRQALEEERRRR 1194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,628,942
Number of Sequences: 237096
Number of extensions: 1340514
Number of successful extensions: 2893
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2893
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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