Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f17f
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47356-2|CAA87415.1| 252|Caenorhabditis elegans Hypothetical pr... 31 0.47
U80452-9|AAB37854.2| 179|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z50872-3|CAA90756.1| 238|Caenorhabditis elegans Hypothetical pr... 28 4.4
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 28 5.8
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 5.8
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 5.8
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 5.8
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z93381-2|CAB07605.1| 374|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical pr... 27 7.7
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 27 7.7
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z47356-2|CAA87415.1| 252|Caenorhabditis elegans Hypothetical
protein T15H9.2 protein.
Length = 252
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 412 EERDNLIKELMS-KNRNRQLETLVREMKNKRQFMNEETLKKLFKHYSLD 555
+ + + KEL++ +NR R+L +M +++ + E L+ LFK +SL+
Sbjct: 190 KRNEEMQKELIAERNRQRKLHDATMKMMEEKERVRVEQLEDLFKDFSLE 238
>U80452-9|AAB37854.2| 179|Caenorhabditis elegans Hypothetical
protein C16C8.12 protein.
Length = 179
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 364 HMVENGSKSTNPPMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFM 510
H+ E+ N + + I +L++KN ++ LETL++ K + Q M
Sbjct: 60 HVQESLMSELNSVKNELKHAKSINDLIAKNADKNLETLLKIQKTQDQIM 108
>Z50872-3|CAA90756.1| 238|Caenorhabditis elegans Hypothetical
protein C05D12.5 protein.
Length = 238
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 352 NIQNHMVENGSKSTNPPMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEET 522
N + + E+G++ST E RD+ +++ + + N LET + K K + + ET
Sbjct: 117 NYEERLKESGNEST-ASFDKESRDDSLEDFVEVSINEILETAESKRKLKERINHMET 172
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +1
Query: 358 QNHMVENGSKSTNPPMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETLKK 531
QN++ + S S P + R L+ L +R+ VREM K Q M EETL K
Sbjct: 506 QNNLGSSSSSSVQPKLEASFR-KLLNTLGQDSRDSD----VREMNKKLQRMLEETLSK 558
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 397 PPMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQ 504
PP EE D+LI+ + K+ + V EMK +R+
Sbjct: 54 PPPMPEENDSLIRSMKRKHEYGNVIKKVEEMKVRRE 89
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 397 PPMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQ 504
PP EE D+LI+ + K+ + V EMK +R+
Sbjct: 54 PPPMPEENDSLIRSMKRKHEYGNVIKKVEEMKVRRE 89
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 352 NIQNHMVENGSKSTNP--PMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETL 525
NIQNH + + ++ P P T + + K+ + + ++ E RE + +R+ +ET
Sbjct: 741 NIQNHQPPHSNANSTPSTPSTSTHQ-AMFKDKEKERKKKEKEKEEREREARREMKRKETK 799
Query: 526 KKLFKHYSLD 555
++ K ++
Sbjct: 800 EERNKRKEME 809
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 352 NIQNHMVENGSKSTNP--PMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETL 525
NIQNH + + ++ P P T + + K+ + + ++ E RE + +R+ +ET
Sbjct: 1032 NIQNHQPPHSNANSTPSTPSTSTHQ-AMFKDKEKERKKKEKEKEEREREARREMKRKETK 1090
Query: 526 KKLFKHYSLD 555
++ K ++
Sbjct: 1091 EERNKRKEME 1100
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 352 NIQNHMVENGSKSTNP--PMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETL 525
NIQNH + + ++ P P T + + K+ + + ++ E RE + +R+ +ET
Sbjct: 1047 NIQNHQPPHSNANSTPSTPSTSTHQ-AMFKDKEKERKKKEKEKEEREREARREMKRKETK 1105
Query: 526 KKLFKHYSLD 555
++ K ++
Sbjct: 1106 EERNKRKEME 1115
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 352 NIQNHMVENGSKSTNP--PMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETL 525
NIQNH + + ++ P P T + + K+ + + ++ E RE + +R+ +ET
Sbjct: 1047 NIQNHQPPHSNANSTPSTPSTSTHQ-AMFKDKEKERKKKEKEKEEREREARREMKRKETK 1105
Query: 526 KKLFKHYSLD 555
++ K ++
Sbjct: 1106 EERNKRKEME 1115
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 352 NIQNHMVENGSKSTNP--PMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETL 525
NIQNH + + ++ P P T + + K+ + + ++ E RE + +R+ +ET
Sbjct: 741 NIQNHQPPHSNANSTPSTPSTSTHQ-AMFKDKEKERKKKEKEKEEREREARREMKRKETK 799
Query: 526 KKLFKHYSLD 555
++ K ++
Sbjct: 800 EERNKRKEME 809
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 352 NIQNHMVENGSKSTNP--PMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETL 525
NIQNH + + ++ P P T + + K+ + + ++ E RE + +R+ +ET
Sbjct: 1032 NIQNHQPPHSNANSTPSTPSTSTHQ-AMFKDKEKERKKKEKEKEEREREARREMKRKETK 1090
Query: 526 KKLFKHYSLD 555
++ K ++
Sbjct: 1091 EERNKRKEME 1100
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 352 NIQNHMVENGSKSTNP--PMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETL 525
NIQNH + + ++ P P T + + K+ + + ++ E RE + +R+ +ET
Sbjct: 1047 NIQNHQPPHSNANSTPSTPSTSTHQ-AMFKDKEKERKKKEKEKEEREREARREMKRKETK 1105
Query: 526 KKLFKHYSLD 555
++ K ++
Sbjct: 1106 EERNKRKEME 1115
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 352 NIQNHMVENGSKSTNP--PMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETL 525
NIQNH + + ++ P P T + + K+ + + ++ E RE + +R+ +ET
Sbjct: 1047 NIQNHQPPHSNANSTPSTPSTSTHQ-AMFKDKEKERKKKEKEKEEREREARREMKRKETK 1105
Query: 526 KKLFKHYSLD 555
++ K ++
Sbjct: 1106 EERNKRKEME 1115
>Z93381-2|CAB07605.1| 374|Caenorhabditis elegans Hypothetical
protein F28G4.2 protein.
Length = 374
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 503 CLLFFISLTRVSNCLFLFFDINSFIKLS-RSSSVMGGLVDLEPFSTI*FWMFTVFFSLVL 327
C + FI T +S + L FD + + L + +++ GLVDL+ FST+ V +SL L
Sbjct: 93 CNIQFIPNT-LSRLVALAFDREAQMALKEKHPNIVNGLVDLKKFSTVPENHGYVTYSLAL 151
Query: 326 CT 321
T
Sbjct: 152 HT 153
>Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical
protein T06D8.8 protein.
Length = 387
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 388 STNPPMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMNEETLKKLFK 540
+ N P+ D+ ++ +KEL K QL L R + K QF+ + + ++
Sbjct: 13 AANGPLADDWKN--LKELWEKKLWHQLTVLTRSLVKKPQFVASTDMHEFYR 61
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +1
Query: 334 KEKNTVNIQNHMVENGSKSTNPPMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMN 513
K + + +NH V+N S S + +T E + E + +++ + +RE + M
Sbjct: 514 KAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMK 573
Query: 514 EE 519
E
Sbjct: 574 RE 575
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +1
Query: 334 KEKNTVNIQNHMVENGSKSTNPPMTDEERDNLIKELMSKNRNRQLETLVREMKNKRQFMN 513
K + + +NH V+N S S + +T E + E + +++ + +RE + M
Sbjct: 514 KAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMK 573
Query: 514 EE 519
E
Sbjct: 574 RE 575
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,818,687
Number of Sequences: 27780
Number of extensions: 250077
Number of successful extensions: 869
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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