Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f16r
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 490  RSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 353
            R +GT DV F+++   + A     G P+  R + ++  T +   +R
Sbjct: 1429 RQIGTLDVAFKKRFAKLNANGTNAGTPVLSRRLTMRRETMKALEVR 1474


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 490  RSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 353
            R +GT DV F+++   + A     G P+  R + ++  T +   +R
Sbjct: 1429 RQIGTLDVAFKKRFAKLNANGTNAGTPVLSRRLTMRRETMKALEVR 1474


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 490  RSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 353
            R +GT DV F+++   + A     G P+  R + ++  T +   +R
Sbjct: 1429 RQIGTLDVAFKKRFAKLNANGTNAGTPVLSRRLTMRRETMKALEVR 1474


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 490  RSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 353
            R +GT DV F+++   + A     G P+  R + ++  T +   +R
Sbjct: 1429 RQIGTLDVAFKKRFAKLNANGTNAGTPVLSRRLTMRRETMKALEVR 1474


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 664 TYHVSKCXSHHPSNSW 711
           T+H+    S HP  SW
Sbjct: 150 THHLGSVYSRHPYESW 165


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 343 RNRIGGASVGGTIRNNPKRGGGG 275
           RN     + G T RN+   G GG
Sbjct: 397 RNNTSSRAQGETSRNSKNSGNGG 419


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 102 KTECLCTFSLVIHLISF 152
           KT+  CT  ++ HLI F
Sbjct: 37  KTDKNCTIVIIFHLILF 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,875
Number of Sequences: 336
Number of extensions: 3046
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)