Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f16r
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 59 3e-09
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 59 3e-09
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 58 9e-09
Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 54 8e-08
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 54 8e-08
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 50 2e-06
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 50 2e-06
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 49 3e-06
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 48 5e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 48 7e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 48 7e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 48 9e-06
AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical ... 47 1e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 47 2e-05
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 46 3e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 43 3e-04
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 43 3e-04
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 43 3e-04
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 43 3e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 42 5e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 42 5e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 42 5e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 42 5e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 42 5e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 42 5e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 36 0.030
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 35 0.053
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 35 0.070
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 34 0.092
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 34 0.12
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 34 0.12
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.21
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 32 0.49
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 32 0.49
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 32 0.49
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 32 0.49
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 32 0.49
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 31 0.65
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.65
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 0.65
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.65
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 29 3.5
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 29 4.6
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 29 4.6
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical
protein F23B2.6 protein.
Length = 227
Score = 66.9 bits (156), Expect = 1e-11
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
++ +SNL V SD++ELF F + K SV+++ +G + GT D+ +K DA + ++++
Sbjct: 81 RINISNLAETVISSDLQELFGAFNLHK-VSVNFNENGGAAGTGDITL-KKYDADRLIQKF 138
Query: 421 NGVPLDGRAMNIQLATSEINTLRPEAR---NR--IGGASVGGTIRNNPKRGGGGIRNQXX 257
GV LDG+ M+ + S +PE R NR G + + N P+R
Sbjct: 139 AGVALDGKVMHFAVIESSNFARKPEIRGTPNRRQSSGKPINRKVANPPRRQNAA------ 192
Query: 256 XXXXXXXXXXXXXXXXGKRPVPTAEQLDAELDAYV 152
++P TAEQLDAELDAY+
Sbjct: 193 ----KPPVKKGKKPAREQKPPKTAEQLDAELDAYM 223
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/84 (32%), Positives = 49/84 (58%)
Frame = -1
Query: 610 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 431
GP +L VSN+ F D D+K +F +FG++ + ++ G S G V ER DA +A
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERAR 209
Query: 430 KQYNGVPLDGRAMNIQLATSEINT 359
++ +G ++GR + + AT+ +++
Sbjct: 210 QELHGSMIEGRKIEVNCATARVHS 233
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/84 (32%), Positives = 49/84 (58%)
Frame = -1
Query: 610 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 431
GP +L VSN+ F D D+K +F +FG++ + ++ G S G V ER DA +A
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERAR 209
Query: 430 KQYNGVPLDGRAMNIQLATSEINT 359
++ +G ++GR + + AT+ +++
Sbjct: 210 QELHGSMIEGRKIEVNCATARVHS 233
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 57.6 bits (133), Expect = 9e-09
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Frame = -1
Query: 652 GERKXQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTA 473
G R R+ ++ +SNL V D+++LF+EF I ++ SV+++ G+ +GT
Sbjct: 56 GIRTVDRSIPANENREVRINLSNLAHTVHSGDLRQLFAEFKI-RNVSVNFNEHGKPVGTG 114
Query: 472 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSE--INTLR-PEARNRIGGASVGGTIR 302
DV K A + ++++ GV LDG+ + + S N ++ PEA R S G +
Sbjct: 115 DVTLP-KRHADRLIQKFAGVSLDGKEIKFAIIDSANIANRVKFPEAPRR--APSNGRPAQ 171
Query: 301 NNPKRGGGGIRNQXXXXXXXXXXXXXXXXXXGKRPVPTAEQLDAELDAYVKE 146
PKR + +P T E+LDAELD Y+ +
Sbjct: 172 RAPKRQNVK-SGKPTGGAGAQKKLKAKKPKREAQPKKTLEELDAELDVYMSK 222
>Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical
protein M18.7a protein.
Length = 240
Score = 56.0 bits (129), Expect = 3e-08
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = -1
Query: 592 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGV 413
+SNL V SD++ELF ++ L S SV+++ G SLGT D+ K DA + +++++GV
Sbjct: 78 ISNLAPTVISSDLEELFGDYR-LSSVSVNFNEHGDSLGTGDISL-TKRDAERLVQKFSGV 135
Query: 412 PLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIR---NNPKRGGG 278
LDG+ M + S R + NR +S G + R + P+R G
Sbjct: 136 ALDGKIMKFAVIDSSNMAGRVDFGNR-SRSSPGRSSRGFQSGPRRNNG 182
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/100 (27%), Positives = 51/100 (51%)
Frame = -1
Query: 628 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKA 449
S + T GP +L VSN+ F + D+ +F + G + + ++ G S G V +
Sbjct: 92 SSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPD 150
Query: 448 DAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIG 329
DA +A ++NG ++GR + + LAT ++ + + +G
Sbjct: 151 DADRARAEFNGTTIEGRRVEVNLATQRVHNKKAKPLMSVG 190
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/100 (27%), Positives = 51/100 (51%)
Frame = -1
Query: 628 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKA 449
S + T GP +L VSN+ F + D+ +F + G + + ++ G S G V +
Sbjct: 92 SSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPD 150
Query: 448 DAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIG 329
DA +A ++NG ++GR + + LAT ++ + + +G
Sbjct: 151 DADRARAEFNGTTIEGRRVEVNLATQRVHNKKAKPLMSVG 190
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -1
Query: 592 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 416
V N F ++ D+ FS+ G + + + DR +GR G A V F +A A +A+ Q+NG
Sbjct: 8 VGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNG 67
Query: 415 VPLDGRAMNIQLATSEIN 362
V +GRA+ + LA + N
Sbjct: 68 VDFNGRALRVNLAQNRNN 85
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = -1
Query: 610 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 431
GPT +LV NL + + I+++F FG ++ + D + + G A + F DA K+
Sbjct: 125 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSC 184
Query: 430 KQYNGVPLDGRAMNIQL 380
+Q N L GR + + +
Sbjct: 185 EQLNNFELAGRCIRLSI 201
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = -1
Query: 610 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 431
GPT +LV NL + + I+++F FG ++ + D + + G A + F DA K+
Sbjct: 270 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSC 329
Query: 430 KQYNGVPLDGRAMNIQL 380
+Q N L GR + + +
Sbjct: 330 EQLNNFELAGRCIRLSI 346
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = -1
Query: 670 DMFNDFGERKXQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 491
D++ D+ E + + + T++ L + N+ V++ + ELF E+ L DR
Sbjct: 356 DVYVDWAEHQEEPDEDTMSKVKV-LYIRNIKEAVTEEKLNELFKEYASL-------DRVK 407
Query: 490 RSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA-TSEINTLRPEARNRIGGASVG 314
+ A + F + D +KAM+++NG L+G + LA + +P R R G G
Sbjct: 408 KVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEASLAKPPQEKKKKPVMRGR-GFGGAG 466
Query: 313 GTIRNNPKRGG 281
G N+ +RGG
Sbjct: 467 GGAGNHGQRGG 477
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
K+ V NL V + +++++F ++G +K + +SGR A V FE DA A++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 421 NGVPLDGRAMNIQLATSEINTLRPEARN-RIGGASVGGTIRNNPKRGGG 278
+G DGR + ++ T + P R + GG GG R RGGG
Sbjct: 67 DGYEFDGRRIRVEF-TRGVGPRGPSGRPLQDGGDHRGGDFRGG--RGGG 112
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = -1
Query: 607 PTKLL-VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKA 434
P+K L V NL ++ D++++F EFG + + YDR SG S G + F DA A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 433 MKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGIR 269
+ LDG + + + ++ P +G GG+ GGGG R
Sbjct: 134 RDKLCNTDLDGHKIRVDFSLTK-RGHSPTPGQYMGDRRGGGSSGGGRFGGGGGDR 187
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 419
L V N++ ++D +++ FS FG + SA V D +GRS G V FE+ +A A+ N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 418 GVPLDGRAMNIQLA 377
+ + + + LA
Sbjct: 405 SKMIGAKPLYVALA 418
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -1
Query: 616 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERKADAV 440
T L + +L VS++ + E FS G + S V D + R SLG A V F++ ADA
Sbjct: 53 TYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAE 112
Query: 439 KAMKQYNGVPLDGRAMNI 386
+A+ N + GR M I
Sbjct: 113 RALDTMNFEVIHGRPMRI 130
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = -1
Query: 604 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 425
T + V N + + +FS+FG + SA V D G+ G V F + A +A+++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 424 YNGVPLDGRAMNIQLATSE 368
N L+G + + ++
Sbjct: 298 LNDSILEGTDCKLSVCRAQ 316
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 419
L V N++ ++D +++ FS FG + SA V D +GRS G V FE+ +A A+ N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 418 GVPLDGRAMNIQLA 377
+ + + + LA
Sbjct: 405 SKMIGAKPLYVALA 418
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -1
Query: 616 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERKADAV 440
T L + +L VS++ + E FS G + S V D + R SLG A V F++ ADA
Sbjct: 53 TYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAE 112
Query: 439 KAMKQYNGVPLDGRAMNI 386
+A+ N + GR M I
Sbjct: 113 RALDTMNFEVIHGRPMRI 130
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = -1
Query: 604 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 425
T + V N + + +FS+FG + SA V D G+ G V F + A +A+++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 424 YNGVPLDGRAMNIQLATSE 368
N L+G + + ++
Sbjct: 298 LNDSILEGTDCKLSVCRAQ 316
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/77 (28%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -1
Query: 604 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMK 428
T L+++ L G++ +++ LF+ G ++S + D+ +G+SLG V + R+ DA++A+
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 427 QYNGVPLDGRAMNIQLA 377
+NG+ L + + + A
Sbjct: 102 SFNGLRLQNKTIKVSYA 118
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 419
L V NL D+ + +LFS+FG + + + D + + G A V +A AM N
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLN 435
Query: 418 GVPLDGRAMNIQLATS 371
G L G+ + + +S
Sbjct: 436 GTNLAGKTLQVVFKSS 451
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 48.4 bits (110), Expect = 5e-06
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
K+ V NL V + +++++F ++G +K + +SGR A V FE DA A++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 421 NGVPLDGRAMNIQLATSEINTLRPEARN-RIGGASVGGTIRNNPKRGGG 278
+G DGR + ++ T + P R + GG GG R RGGG
Sbjct: 67 DGYEFDGRRIRVEF-TRGVGPRGPGGRPLQDGGDHRGGDFRGG--RGGG 112
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 419
L V NLD V D +K+ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 318
Query: 418 GVPLDGRAMNIQLA 377
+ + + + +A
Sbjct: 319 SKMVCSKPLYVAIA 332
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = -1
Query: 637 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVF 461
Q +G+ T L V +L V++S + E FS G + S V D + R SLG A V F
Sbjct: 22 QNQTGSSYT-MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 460 ERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARN 338
++ ADA +AM N L G+ M I + + R A N
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGN 121
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 419
L V NLD V D +K+ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 315
Query: 418 GVPLDGRAMNIQLA 377
+ + + + +A
Sbjct: 316 SKMVCSKPLYVAIA 329
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 419
L V NLD V D +K+ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Query: 418 GVPLDGRAMNIQLA 377
+ + + + +A
Sbjct: 379 SKMVCSKPLYVAIA 392
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = -1
Query: 637 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVF 461
Q +G+ T L V +L V++S + E FS G + S V D + R SLG A V F
Sbjct: 22 QNQTGSSYT-MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 460 ERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARN 338
++ ADA +AM N L G+ M I + + R A N
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGN 121
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = -1
Query: 625 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKA 449
G+ T TK+ V L + SD + E F +FG ++ A V DR + +S G V + +A
Sbjct: 28 GSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRA 87
Query: 448 DAVKAMKQYNGVPLDGRAMNIQLA 377
A +A K N + +DGR N+ LA
Sbjct: 88 SAERACKDPNPI-IDGRKANVNLA 110
>AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical
protein C02B10.4 protein.
Length = 211
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = -1
Query: 619 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 440
I TGP+ L++ NL V+ D++ELF ++ + +HY +G S G AD++ A+
Sbjct: 88 IHTGPSTLIIKNLATTVTQEDLEELFEQYE-PELVQLHYGPTGESNGCADLIVPHAQVAI 146
Query: 439 KAMKQYNGVPLDGRAMNI 386
K GV LDG + +
Sbjct: 147 -IQKALEGVLLDGEPIEV 163
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 419
L V NLD V D +K+ F +G + SA V D +GRS G V FE+ +A A+ + N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = -1
Query: 637 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVF 461
Q +G+ T L V +L V++S + E FS G + S V D + R SLG A V F
Sbjct: 22 QNQTGSSYT-MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 460 ERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARN 338
++ ADA +AM N L G+ M I + + R A N
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGN 121
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/111 (26%), Positives = 54/111 (48%)
Frame = -1
Query: 616 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 437
T +K+ V N+ F +D ++K LFS+FG + S + G+ G A V F+ +A A K
Sbjct: 679 TLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQK 738
Query: 436 AMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRG 284
+ + + L R + + L+ + + + GAS+ + P++G
Sbjct: 739 CVASGDKLMLRERELEVALSNPPVKKDKSHGKPAAIGASLE---EDGPRKG 786
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS----LGTADVVFERKADAVKAM 431
+ VSNLDF ++ +I++ G+ AS+ + R S G A VV E A +A+
Sbjct: 595 IFVSNLDFTTTEDEIRQAIE--GV---ASIRFARKANSDLVHRGFAYVVMENDQKAQQAL 649
Query: 430 KQYNGVPLDGRAMNI 386
+ + VP+ GR M I
Sbjct: 650 LK-DRVPVKGRPMFI 663
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -1
Query: 592 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 416
V N+ + ++ +I F+ G + + + YDR +GR G A V F +A A +A++Q NG
Sbjct: 10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
Query: 415 VPLDGRAMNIQLA 377
V +GR + + A
Sbjct: 70 VAFNGRNLRVNYA 82
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = -1
Query: 613 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVK 437
+G + V N F ++ ++ FS G + + + DR +GR G A + F + A +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 436 AMKQYNGVPLDGRAMNIQLA 377
A++Q NG +GR + + LA
Sbjct: 62 AVEQMNGAEFNGRPLRVNLA 81
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = -1
Query: 661 NDFGERKXQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 482
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 272 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 331
Query: 481 GTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS---EINTLRPEARNRIGG 326
G A + +A+ NG+ L + + +QLA + NT P + + I G
Sbjct: 332 GYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAG 386
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = -1
Query: 661 NDFGERKXQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 482
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 272 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 331
Query: 481 GTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS---EINTLRPEARNRIGG 326
G A + +A+ NG+ L + + +QLA + NT P + + I G
Sbjct: 332 GYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAG 386
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = -1
Query: 661 NDFGERKXQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 482
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 247 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 306
Query: 481 GTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS---EINTLRPEARNRIGG 326
G A + +A+ NG+ L + + +QLA + NT P + + I G
Sbjct: 307 GYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAG 361
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = -1
Query: 661 NDFGERKXQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 482
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 250 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 309
Query: 481 GTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATS---EINTLRPEARNRIGG 326
G A + +A+ NG+ L + + +QLA + NT P + + I G
Sbjct: 310 GYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAG 364
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
+ V N+ + VS+ I+ +FS+ G +L VH +G+ G + F A A++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 421 NGVPLDGRAMNIQLATSEIN 362
NG L GR + + A +N
Sbjct: 80 NGYELSGRILRVDSAAGGMN 99
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 425
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 425
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 425
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 425
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 425
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 425
KL + L ++ +++E+F++FG ++ SV D+ G+S G A V F ++ AV A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKE 201
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/72 (22%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 422
+ + L + +S+ D+ +FS++G + + ++ D+ +G+S G A + ++ + + A+ +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 421 NGVPLDGRAMNI 386
NG+ L R + +
Sbjct: 100 NGISLHKRMIRV 111
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 37.5 bits (83), Expect = 0.010
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = -1
Query: 622 TITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASV-HYDRSGRSLGTADVVFERKAD 446
+IT G L NL + + IKE S+FG + A + Y SG S GTA V F +
Sbjct: 258 SITEGKVVFL-RNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIE 316
Query: 445 AVKAMKQY-NGVPLDGRAMNIQLA 377
A ++ +GV +D R + LA
Sbjct: 317 ASNCIEGVEDGVIIDNRLVKANLA 340
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
++ ++NL F V + E+F G + D+ G+S G + + +AV+A+
Sbjct: 189 RIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSML 248
Query: 421 NGVPLDGRAMNIQL 380
NG L R + +++
Sbjct: 249 NGQRLFDRNLVVKM 262
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 422
L V L+ +D D++ +FS FG + + + D RSG SL A + F+ +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 421 NGVPLDGRAMNIQLATS 371
+ V +D R +++ + S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 422
L V L+ +D D++ +FS FG + + + D RSG SL A + F+ +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 421 NGVPLDGRAMNIQLATS 371
+ V +D R +++ + S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 422
L V L+ +D D++ +FS FG + + + D RSG SL A + F+ +A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 421 NGVPLDGRAMNIQLATS 371
+ V +D R +++ + S
Sbjct: 234 DNVLIDDRRIHVDFSQS 250
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/73 (23%), Positives = 36/73 (49%)
Frame = -1
Query: 547 LFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSE 368
+F + G + + ++ G S G V + DA +A ++NG ++GR + + LAT
Sbjct: 1 MFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
Query: 367 INTLRPEARNRIG 329
++ + + +G
Sbjct: 60 VHNKKAKPLMSVG 72
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 35.1 bits (77), Expect = 0.053
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 419
L + NL + ++ ++ E+F +FG ++ + + + GTA VV+E DA A + +
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVR--QIRVGNTAETRGTAFVVYEDIFDAKTACEHLS 78
Query: 418 GVPLDGR 398
G + R
Sbjct: 79 GYNVSNR 85
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 34.7 bits (76), Expect = 0.070
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKE----LFSEFG-ILKSASVHYDRSGRSLGTADVVFERKADAVKA 434
+ V+NL+ V ++K +F++FG I++ S R + G A +VF+ + A A
Sbjct: 10 IYVNNLNEKVKKDELKRSLHMVFTQFGEIIQLMSF---RKEKMRGQAHIVFKEVSSASNA 66
Query: 433 MKQYNGVPLDGRAMNIQLATSEINTL 356
++ G P G+ M IQ A + + +
Sbjct: 67 LRALQGFPFYGKPMRIQYAREDSDVI 92
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 34.3 bits (75), Expect = 0.092
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = -1
Query: 604 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 425
T + V N+ +D+D+++LFS +G + A V ++ R A V +E+K A KA+ +
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDI--AEVRIFKTQR---YAFVRYEKKECATKAIME 291
Query: 424 YNGVPLDG 401
NG + G
Sbjct: 292 MNGKEMAG 299
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = -1
Query: 613 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 434
TG +L V NL V ++++KELFS G + + SG+ G A + + +A A A
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL----SGK--GFAFLRLDTRAHAESA 166
Query: 433 MKQYNGVPLDGRAMNIQLA 377
+ +G + GR + ++ A
Sbjct: 167 KEAIDGRIIHGRQVRVRFA 185
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -1
Query: 592 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 431
V L VS+ + FS FG ++ A D GR G V FERK + +AM
Sbjct: 193 VKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKGRPTGEGIVEFERKPNCNEAM 246
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = -1
Query: 613 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 434
TG +L V NL V ++++KELFS G + + SG+ G A + + +A A A
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL----SGK--GFAFLRLDTRAHAESA 166
Query: 433 MKQYNGVPLDGRAMNIQLA 377
+ +G + GR + ++ A
Sbjct: 167 KEAIDGRIIHGRQVRVRFA 185
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -1
Query: 592 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 431
V L VS+ + FS FG ++ A D GR G V FERK + +AM
Sbjct: 193 VKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKGRPTGEGIVEFERKPNCNEAM 246
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 33.5 bits (73), Expect = 0.16
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = -1
Query: 664 FNDFGERKXQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 485
F GER+ + +L++ NL S DIK+ + GI + S + R+
Sbjct: 92 FRKGGERQFSNRYSRPCSTRFRLVIDNLSTRYSWQDIKDHIRKLGIEPTYS---EAHKRN 148
Query: 484 LGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR-PEARNR 335
+ A V F D AM + G L+GR + T + + R P R+R
Sbjct: 149 VNQAIVCFTSHDDLRDAMNKLQGEDLNGRKLKCTDETRDRSRSRSPRRRSR 199
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 33.1 bits (72), Expect = 0.21
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Frame = -1
Query: 619 ITTGPTKLLVSNLDFGVSDSDIKELFSE-FG-ILKSASVHYDRSGR------SLGTADVV 464
I +G T L V NL F +D ++ LF + +G ++KSA + + S+G V
Sbjct: 637 IESGST-LFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQ 695
Query: 463 FERKADAVKAMKQYNGVPLDGRAMNIQLATSE 368
F DA A+K G LDG ++ ++++ E
Sbjct: 696 FYTAFDAKTALKDMQGELLDGHSLELKISHRE 727
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLG 479
KL + L ++ +++E+F++FG ++ SV D+ G+S G
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRG 183
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 571 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFERKADAVKAMKQ 425
V+ +I ++FSEFG++ ++ D+ G G A V FER + +A+++
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 379
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 571 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFERKADAVKAMKQ 425
V+ +I ++FSEFG++ ++ D+ G G A V FER + +A+++
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 379
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 571 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFERKADAVKAMKQ 425
V+ +I ++FSEFG++ ++ D+ G G A V FER + +A+++
Sbjct: 116 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 165
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 571 VSDSDIKELFSEFGILKSASVHYDRS-GRSLGTADVVFERKADAVKAMKQ 425
V+ +I ++FSEFG++ ++ D+ G G A V FER + +A+++
Sbjct: 330 VTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEK 379
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 31.5 bits (68), Expect = 0.65
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKE----LFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAM 431
L ++NL+ + ++++ +F +FG + SV R+ + G A V+F+ A A
Sbjct: 10 LYINNLNEKIKIDELRKSLVAVFKQFGEI--VSVMCFRTLKMRGQAHVIFKELPAASAAR 67
Query: 430 KQYNGVPLDGRAMNIQLATSEINTLRPE 347
+ NG P + M IQ A + + + E
Sbjct: 68 EALNGFPFYEKPMRIQFAREDSDVVAQE 95
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.5 bits (68), Expect = 0.65
Identities = 29/109 (26%), Positives = 48/109 (44%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
K+ V L + +++E+F FG ++ V + R G A V ++ DA A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV----ARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 421 NGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGG 275
+G + G ++L+T + R GG GG RGGGG
Sbjct: 60 DGSRICGVRARVELSTGQ----------RRGGGGRGGGFGG---RGGGG 95
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.5 bits (68), Expect = 0.65
Identities = 29/109 (26%), Positives = 48/109 (44%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
K+ V L + +++E+F FG ++ V + R G A V ++ DA A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV----ARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 421 NGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGG 275
+G + G ++L+T + R GG GG RGGGG
Sbjct: 60 DGSRICGVRARVELSTGQ----------RRGGGGRGGGFGG---RGGGG 95
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.5 bits (68), Expect = 0.65
Identities = 29/109 (26%), Positives = 48/109 (44%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
K+ V L + +++E+F FG ++ V + R G A V ++ DA A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV----ARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 421 NGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGG 275
+G + G ++L+T + R GG GG RGGGG
Sbjct: 60 DGSRICGVRARVELSTGQ----------RRGGGGRGGGFGG---RGGGG 95
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.1 bits (67), Expect = 0.86
Identities = 28/113 (24%), Positives = 46/113 (40%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
++ + L VS+ DI+ F +G ++ + G V F+ K DA A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN-------GFGFVEFDDKRDAEDAVHDL 56
Query: 421 NGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGIRNQ 263
NG L G + + + R GG GG ++ GGGG R++
Sbjct: 57 NGKELGGERVILDYSKPRGGG---GDRGGFGGGGRGGARVSSYSGGGGGGRDR 106
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.1 bits (67), Expect = 0.86
Identities = 28/113 (24%), Positives = 46/113 (40%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
++ + L VS+ DI+ F +G ++ + G V F+ K DA A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN-------GFGFVEFDDKRDAEDAVHDL 56
Query: 421 NGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGIRNQ 263
NG L G + + + R GG GG ++ GGGG R++
Sbjct: 57 NGKELGGERVILDYSKPRGGG---GDRGGFGGGGRGGARVSSYSGGGGGGRDR 106
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.86
Identities = 28/113 (24%), Positives = 46/113 (40%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 422
++ + L VS+ DI+ F +G ++ + G V F+ K DA A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN-------GFGFVEFDDKRDAEDAVHDL 56
Query: 421 NGVPLDGRAMNIQLATSEINTLRPEARNRIGGASVGGTIRNNPKRGGGGIRNQ 263
NG L G + + + R GG GG ++ GGGG R++
Sbjct: 57 NGKELGGERVILDYSKPRGGG---GDRGGFGGGGRGGARVSSYSGGGGGGRDR 106
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQ 425
+ V NLD V + + + FS FG IL+ + D SG S G A + F + A++
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 424 YNGVPLDGRAMNIQLA 377
NG L RA+ + A
Sbjct: 162 MNGQFLCNRAITVSYA 177
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 598 LLVSNLDFGVSDSDIKELFSEFG-ILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQ 425
+ V NLD V + + + FS FG IL+ + D SG S G A + F + A++
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 424 YNGVPLDGRAMNIQLA 377
NG L RA+ + A
Sbjct: 172 MNGQFLCNRAITVSYA 187
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 475 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRP 350
A V FE DA KA+ +G ++ QLA +E+ + RP
Sbjct: 66 AYVTFETPEDAQKAINLVDGYDYKKFILSAQLAATEVKSFRP 107
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 613 TGPTKLLVSNLDFGVSDSDIKELFSEFG 530
TG +L V NL V ++++KELFS G
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHG 140
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 604 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRS 494
T + VSN+ V++ D+ F FG L + + Y RS
Sbjct: 200 TNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRS 236
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Frame = -1
Query: 601 KLLVSNLDFGVSDSDIKELFSEFGIL---------KSASVH--YDRSGRSLGTADVVFER 455
K++VSN+ V+ S ++ FS++G + K SV + R+ GTA + F++
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATITFKK 172
Query: 454 KADAVKA 434
A +A
Sbjct: 173 SEHADRA 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,623,947
Number of Sequences: 27780
Number of extensions: 278229
Number of successful extensions: 750
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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