Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f16f
         (626 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    32   0.013
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.64 
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   2.6  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   2.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.4  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    24   3.4  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    24   3.4  
Z71480-1|CAA96104.1|  209|Anopheles gambiae GSTD2 protein protein.     24   4.5  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   6.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 32.3 bits (70), Expect = 0.013
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = +3

Query: 228 GGGAGFRSNRSGGVQRGRNRGG 293
           GGG G R  R GG  RGR RGG
Sbjct: 66  GGGRGGRGGRGGGRGRGRGRGG 87



 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 183 GGAGRKFDANKRTGRGGGAGFRSNRSGG 266
           GG GR     +  GRG G G R  R GG
Sbjct: 65  GGGGRGGRGGRGGGRGRGRG-RGGRDGG 91


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = +3

Query: 177 IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 347
           +GGGA         +G GGGAG      GG+  G   GG     ++  G   +   H
Sbjct: 671 LGGGA-----VGGGSGAGGGAGSSGGSGGGLASGSPYGGGGHHLSHHHGGAAAATGH 722



 Score = 25.8 bits (54), Expect = 1.1
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 180  GGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDM 353
            GGG     D +   G GGG   G     SGG   G + GG +  T+   G  +ST + D 
Sbjct: 824  GGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTS---GGGSSTTRRDH 880

Query: 354  FNDFGERKLQRNSGTITT 407
              D+    +Q  +GT  T
Sbjct: 881  NIDYSSLFIQL-TGTFPT 897



 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGI 296
           GG  G +++   R G G G G      GG   GR  GG+
Sbjct: 540 GGSDGPEYEGAGRGGVGSGIGGGGGGGGG---GRAGGGV 575



 Score = 23.8 bits (49), Expect = 4.5
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +3

Query: 153 IKANKKTRIGGGAGRK--FDANKRTGRGGGAGFRSNRSGGVQRGRNRGGI 296
           +  N     GGG G     + ++  G GG AG  S+  G    G  RGG+
Sbjct: 508 VVVNAVLAAGGGGGGSGCVNGSRTVGAGGMAGGGSD--GPEYEGAGRGGV 555


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 478 RNLASSKVHLYIMIGQVDL*VLQMLCLKEKQML 576
           R +A +++H Y+ +  +DL    +L  KE Q+L
Sbjct: 517 RQIAENELHQYLSVENIDLENDPLLWWKEHQVL 549


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 210 NKRTGRGGGAGFRSNRSGGVQRGRNRGGI 296
           +++T  GGG G  +  SGG   G + G +
Sbjct: 243 SQQTSNGGGTGGGTGGSGGAGSGGSSGNL 271


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 15/49 (30%), Positives = 17/49 (34%)
 Frame = +3

Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGD 326
           GGG GR  D   R     G G      GG+Q       I       RG+
Sbjct: 228 GGGGGRDRDHRDRDREREGGGNGGGGGGGMQLDGRGNAIPSMVVDRRGE 276



 Score = 23.8 bits (49), Expect = 4.5
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = +3

Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQR--GRNRGG 293
           GGG G         G GGG   R +R    +R  G N GG
Sbjct: 213 GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 440 VQIGYKQLGRTSCYGPTVS 384
           VQIG +Q+G+T  +GP  S
Sbjct: 228 VQIGTRQVGQTLHFGPNPS 246


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 440 VQIGYKQLGRTSCYGPTVS 384
           VQIG +Q+G+T  +GP  S
Sbjct: 228 VQIGTRQVGQTLHFGPNPS 246


>Z71480-1|CAA96104.1|  209|Anopheles gambiae GSTD2 protein protein.
          Length = 209

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 64  KNNPFRTLPSQVDGDKMAEE 5
           K NP RT+P+ VDG  +  E
Sbjct: 46  KLNPQRTIPTLVDGSLVLSE 65


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 438 DFGVSDSDIKELFSEFGIL 494
           DFG   +D +++ SEFG +
Sbjct: 79  DFGYDIADFRDIHSEFGTI 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,019
Number of Sequences: 2352
Number of extensions: 14399
Number of successful extensions: 52
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)