Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f16f
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 172 1e-42
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 142 1e-33
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 55 2e-07
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 55 2e-07
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 55 2e-07
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 55 2e-07
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 53 7e-07
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 53 7e-07
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 52 1e-06
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 52 2e-06
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 52 2e-06
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 52 2e-06
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 52 2e-06
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 52 2e-06
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 52 2e-06
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 52 2e-06
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 52 2e-06
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 52 2e-06
X72018-1|CAA50897.1| 570|Homo sapiens ORF protein. 51 4e-06
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 51 4e-06
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 51 4e-06
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 51 4e-06
AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear r... 51 4e-06
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 50 5e-06
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 50 5e-06
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 50 5e-06
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 50 5e-06
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 50 5e-06
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 50 7e-06
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 50 7e-06
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 50 7e-06
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 50 7e-06
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 50 7e-06
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 50 7e-06
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 50 7e-06
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 50 7e-06
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 50 7e-06
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 50 7e-06
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 50 7e-06
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 50 7e-06
DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein. 49 1e-05
CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein. 49 1e-05
BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif prote... 49 1e-05
AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif prote... 49 1e-05
AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif prote... 49 1e-05
AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif prote... 49 1e-05
AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif prote... 49 1e-05
AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein pr... 49 1e-05
AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein. 49 1e-05
AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide bind... 49 1e-05
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 49 2e-05
AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif prote... 49 2e-05
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 49 2e-05
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 49 2e-05
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 49 2e-05
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 49 2e-05
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 49 2e-05
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 49 2e-05
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 49 2e-05
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 49 2e-05
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 49 2e-05
AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protei... 49 2e-05
Z93241-3|CAI19835.1| 421|Homo sapiens protein ( Human DNA seque... 48 2e-05
DQ887818-1|ABI74675.1| 163|Homo sapiens POLDIP3 protein. 48 2e-05
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 48 2e-05
CR456456-1|CAG30342.1| 421|Homo sapiens dJ222E13.3 protein. 48 2e-05
BC095411-1|AAH95411.1| 421|Homo sapiens polymerase (DNA-directe... 48 2e-05
BC056912-1|AAH56912.2| 392|Homo sapiens polymerase (DNA-directe... 48 2e-05
BC049840-1|AAH49840.1| 421|Homo sapiens polymerase (DNA-directe... 48 2e-05
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 48 2e-05
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 48 2e-05
BC001488-1|AAH01488.2| 417|Homo sapiens POLDIP3 protein protein. 48 2e-05
AY422990-1|AAQ94604.1| 421|Homo sapiens RNA-binding protein P46... 48 2e-05
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 48 2e-05
AL160112-1|CAB77059.1| 392|Homo sapiens hypothetical protein pr... 48 2e-05
AL160111-1|CAB77058.1| 421|Homo sapiens hypothetical protein pr... 48 2e-05
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 48 2e-05
AB055760-1|BAB33368.2| 424|Homo sapiens KIAA1649 protein protein. 48 2e-05
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 48 3e-05
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 48 3e-05
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 48 3e-05
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 48 3e-05
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 48 3e-05
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 48 3e-05
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 48 3e-05
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 48 3e-05
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 48 4e-05
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 48 4e-05
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 48 4e-05
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 48 4e-05
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 48 4e-05
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 46 8e-05
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 46 8e-05
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 46 8e-05
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 46 8e-05
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 46 1e-04
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 45 2e-04
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 45 2e-04
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 45 2e-04
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 45 2e-04
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 45 2e-04
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 45 2e-04
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 45 2e-04
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 45 2e-04
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 45 2e-04
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 45 3e-04
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 45 3e-04
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 45 3e-04
BC026077-1|AAH26077.1| 161|Homo sapiens RBMY2FP protein protein. 45 3e-04
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 44 4e-04
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 44 4e-04
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 44 4e-04
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 44 6e-04
BC014533-1|AAH14533.3| 211|Homo sapiens MYEF2 protein protein. 43 8e-04
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 43 8e-04
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 43 8e-04
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 43 8e-04
AK002075-1|BAA92070.1| 188|Homo sapiens protein ( Homo sapiens ... 43 8e-04
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 43 8e-04
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 42 0.002
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 42 0.002
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 42 0.002
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 42 0.002
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 42 0.002
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 42 0.002
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 42 0.002
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 42 0.002
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 42 0.002
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 42 0.002
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 42 0.002
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 42 0.002
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 42 0.002
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 42 0.002
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 42 0.002
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 41 0.003
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 41 0.003
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 41 0.003
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 41 0.003
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 41 0.003
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 41 0.003
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 41 0.003
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 41 0.004
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 41 0.004
BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein pr... 40 0.005
BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein. 40 0.005
BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein. 40 0.005
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 40 0.005
BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomeras... 40 0.005
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 40 0.005
AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomeras... 40 0.005
AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomeras... 40 0.005
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 40 0.007
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 40 0.007
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 40 0.007
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 40 0.007
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 40 0.007
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 40 0.007
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 40 0.007
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 40 0.007
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 40 0.007
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 40 0.007
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 40 0.007
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 40 0.007
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 40 0.007
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 40 0.010
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 39 0.013
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 39 0.013
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 39 0.013
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 39 0.013
AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein pro... 39 0.013
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 39 0.013
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 38 0.022
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 38 0.022
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 38 0.022
X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5 p... 38 0.022
X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for ... 38 0.022
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 38 0.022
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 38 0.022
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 38 0.022
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 38 0.022
M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen... 38 0.022
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 38 0.022
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 38 0.022
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 38 0.022
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 38 0.022
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 38 0.022
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 38 0.022
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 38 0.022
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 38 0.022
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 38 0.022
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 38 0.022
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 38 0.022
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 38 0.022
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 38 0.029
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 38 0.029
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 38 0.029
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 38 0.038
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 38 0.038
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 38 0.038
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 38 0.038
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 38 0.038
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 38 0.038
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 38 0.038
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 37 0.051
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 37 0.051
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 37 0.051
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 37 0.051
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 37 0.051
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 37 0.051
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 37 0.051
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 37 0.051
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 37 0.051
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 37 0.051
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 37 0.051
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 37 0.051
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 37 0.051
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 37 0.051
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 37 0.051
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 37 0.051
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 37 0.051
BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein. 37 0.067
BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementatio... 36 0.089
AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation... 36 0.089
AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation... 36 0.089
AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation... 36 0.089
AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation... 36 0.089
AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation... 36 0.089
AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation... 36 0.089
AK000324-1|BAA91086.1| 431|Homo sapiens protein ( Homo sapiens ... 36 0.089
AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating pr... 36 0.089
AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating pr... 36 0.089
AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementatio... 36 0.089
AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementatio... 36 0.089
AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementatio... 36 0.089
BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein famil... 36 0.12
AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein famil... 36 0.12
AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein. 36 0.12
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 36 0.16
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 36 0.16
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 36 0.16
U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein. 35 0.21
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 35 0.21
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 35 0.21
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 35 0.21
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 35 0.21
BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear r... 35 0.21
BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear r... 35 0.21
BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.21
BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.21
AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear r... 35 0.21
AF283508-1|AAF91470.1| 362|Homo sapiens cell death regulator av... 35 0.21
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 35 0.21
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 35 0.27
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.27
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.27
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.27
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.27
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.27
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.27
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.27
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.27
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.27
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.27
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.27
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.27
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.27
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 35 0.27
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.27
AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.27
AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repe... 35 0.27
AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.27
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 35 0.27
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 35 0.27
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 34 0.36
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 34 0.36
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 34 0.36
X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRN... 34 0.36
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 34 0.36
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 34 0.36
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.36
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 34 0.36
BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein. 34 0.36
BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein. 34 0.36
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.36
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.36
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.36
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.36
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 34 0.36
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 34 0.36
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.36
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.36
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.36
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.36
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.36
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.36
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 34 0.36
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.36
BC000272-1|AAH00272.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.36
BC000210-1|AAH00210.1| 467|Homo sapiens DDX50 protein protein. 34 0.36
AL359844-2|CAH72376.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.36
AL137423-1|CAB70733.1| 399|Homo sapiens hypothetical protein pr... 34 0.36
AF334103-1|AAK29402.1| 737|Homo sapiens nucleolar protein GU2 p... 34 0.36
X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion p... 34 0.47
U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNO... 34 0.47
S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein. 34 0.47
L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein. 34 0.47
CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein. 34 0.47
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 34 0.47
BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein. 34 0.47
AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA... 34 0.47
AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA... 34 0.47
AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA... 34 0.47
AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA... 34 0.47
AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma apoptosis... 34 0.47
AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma apoptosis... 34 0.47
AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma apoptosis... 34 0.47
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 34 0.47
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 34 0.47
AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA b... 34 0.47
AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma apoptosis... 34 0.47
X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein. 33 0.63
X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein. 33 0.63
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 33 0.63
D82361-3|BAA19555.1| 285|Homo sapiens MSSP-2 protein. 33 0.63
D82361-2|BAA19554.1| 288|Homo sapiens MSSP-2 protein. 33 0.63
D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein. 33 0.63
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 33 0.63
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 33 0.63
BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, sing... 33 0.63
BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, sing... 33 0.63
BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, sing... 33 0.63
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 33 0.63
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 33 0.63
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 33 0.63
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 33 0.63
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 33 0.63
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 33 0.63
AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein. 33 0.63
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 33 0.63
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 33 0.63
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 33 0.83
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 33 0.83
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 33 0.83
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 33 0.83
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 33 0.83
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 33 0.83
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 33 0.83
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 33 0.83
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 33 0.83
U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1 ... 33 1.1
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.1
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 33 1.1
AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens ... 33 1.1
AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens ... 33 1.1
L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein. 32 1.4
D28483-1|BAA05842.1| 407|Homo sapiens SCR3 protein. 32 1.4
BC072679-1|AAH72679.1| 407|Homo sapiens RNA binding motif, sing... 32 1.4
BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear r... 32 1.4
BC027863-1|AAH27863.1| 407|Homo sapiens RNA binding motif, sing... 32 1.4
BC004511-1|AAH04511.2| 207|Homo sapiens HNRPH3 protein protein. 32 1.4
AL117395-1|CAB55897.1| 215|Homo sapiens hypothetical protein pr... 32 1.4
AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear r... 32 1.4
AF132364-1|AAF68852.1| 139|Homo sapiens hnRNP 2H9E protein. 32 1.4
AF132363-1|AAF68851.1| 145|Homo sapiens hnRNP 2H9D protein. 32 1.4
AF132362-1|AAF68850.1| 297|Homo sapiens hnRNP 2H9B protein. 32 1.4
AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein. 32 1.4
AF132360-6|AAF68846.1| 139|Homo sapiens hnRNP 2H9E protein. 32 1.4
AF132360-5|AAF68845.1| 145|Homo sapiens hnRNP 2H9D protein. 32 1.4
AF132360-4|AAF68848.1| 215|Homo sapiens hnRNP 2H9C protein. 32 1.4
AF132360-3|AAF68844.1| 297|Homo sapiens hnRNP 2H9B protein. 32 1.4
AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein. 32 1.4
AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein. 32 1.4
AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in t(1... 32 1.4
U36619-1|AAC16921.1| 176|Homo sapiens Y-chromosome RNA recognit... 32 1.9
S75762-1|AAB32714.2| 195|Homo sapiens FUS-CHOP fusion protein p... 32 1.9
D82351-1|BAA11561.1| 373|Homo sapiens MSSP-1 protein. 32 1.9
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 32 1.9
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 32 1.9
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 31 2.5
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 31 2.5
BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein. 31 2.5
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 31 2.5
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 31 2.5
AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein. 31 2.5
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 31 2.5
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 31 2.5
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 31 2.5
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 31 2.5
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 31 2.5
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 31 2.5
BC117315-1|AAI17316.1| 433|Homo sapiens RBMS3 protein protein. 31 3.3
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 31 3.3
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 31 3.3
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 31 3.3
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 31 3.3
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 31 3.3
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 31 3.3
AY236872-1|AAP75556.1| 419|Homo sapiens RNA binding motif singl... 31 3.3
AY236871-1|AAP75555.1| 437|Homo sapiens RNA binding motif singl... 31 3.3
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 31 3.3
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 31 3.3
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 31 3.3
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 31 3.3
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 31 3.3
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 31 3.3
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 31 3.3
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 31 3.3
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 31 3.3
AF023259-1|AAC63910.1| 411|Homo sapiens RNA-binding protein pro... 31 3.3
CR533502-1|CAG38533.1| 318|Homo sapiens DKFZp761B1514 protein. 31 4.4
BC039734-1|AAH39734.1| 318|Homo sapiens forty-two-three domain ... 31 4.4
BC035006-1|AAH35006.1| 318|Homo sapiens forty-two-three domain ... 31 4.4
BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein. 31 4.4
BC013115-1|AAH13115.1| 358|Homo sapiens RBM9 protein protein. 31 4.4
AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein... 31 4.4
AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein... 31 4.4
AK027672-1|BAB55284.1| 318|Homo sapiens protein ( Homo sapiens ... 31 4.4
AJ344094-1|CAC51432.1| 318|Homo sapiens putative 40-2-3 protein... 31 4.4
BC126261-1|AAI26262.1| 593|Homo sapiens FLJ20273 protein protein. 30 5.8
BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic recombina... 30 5.8
BC034402-1|AAH34402.1| 497|Homo sapiens FLJ20273 protein protein. 30 5.8
AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic recombina... 30 5.8
AK000280-1|BAA91049.1| 524|Homo sapiens protein ( Homo sapiens ... 30 5.8
AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 1... 30 5.8
AF262323-1|AAM21973.1| 593|Homo sapiens RNA-binding protein pro... 30 5.8
AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11 ... 30 5.8
AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and r... 30 5.8
X06347-1|CAA29653.1| 282|Homo sapiens protein ( Human mRNA for ... 30 7.7
U91616-1|AAC51216.1| 500|Homo sapiens I kappa B epsilon protein. 30 7.7
M60784-1|AAA61245.1| 282|Homo sapiens U1 snRNP-specific protein... 30 7.7
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 30 7.7
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 30 7.7
BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 30 7.7
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 30 7.7
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 30 7.7
BC032638-1|AAH32638.1| 411|Homo sapiens methyl-CpG binding doma... 30 7.7
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 30 7.7
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 30 7.7
BC008290-1|AAH08290.1| 282|Homo sapiens small nuclear ribonucle... 30 7.7
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 30 7.7
BC000405-1|AAH00405.1| 282|Homo sapiens small nuclear ribonucle... 30 7.7
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 30 7.7
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 30 7.7
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 30 7.7
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 30 7.7
AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA seq... 30 7.7
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 30 7.7
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 30 7.7
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 30 7.7
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 30 7.7
AF120993-1|AAD56597.1| 411|Homo sapiens methyl-CpG binding prot... 30 7.7
AF120989-1|AAD56596.1| 302|Homo sapiens testis-specific methyl-... 30 7.7
AF072242-1|AAC68871.1| 411|Homo sapiens methyl-CpG binding prot... 30 7.7
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 30 7.7
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 30 7.7
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 30 7.7
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 30 7.7
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 172 bits (418), Expect = 1e-42
Identities = 103/183 (56%), Positives = 121/183 (66%), Gaps = 13/183 (7%)
Frame = +3
Query: 117 MVDQIEMALDDIIKANKKTRIGGGAGR-KFDANKRTGRGGGA--GFRSNRSGGVQRGR-- 281
M D+++M+LDDIIK N+ R G G GR + A + GRGGGA R NR GG R R
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA 60
Query: 282 ------NRGGITKSTNYSRG-DVNSTWKHDMFND-FGERKLQRNSGTITTGPTKLLVSNL 437
GG + YSR + W+HD+F+ FG +G T G KLLVSNL
Sbjct: 61 IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGG-----GAGVETGG--KLLVSNL 113
Query: 438 DFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
DFGVSD+DI+ELF+EFG LK A+VHYDRSGRSLGTADV FERKADA+KAMKQY GVPLDG
Sbjct: 114 DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG 173
Query: 618 RAM 626
R M
Sbjct: 174 RPM 176
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 142 bits (343), Expect = 1e-33
Identities = 89/159 (55%), Positives = 101/159 (63%), Gaps = 12/159 (7%)
Frame = +3
Query: 186 GAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGR--------NRGGITKSTNYSR-GDVN 332
G GR A R GR GGA R NR GG R R GG + YSR +
Sbjct: 4 GRGR---AGSRAGRRGGAQAAARVNRGGGPIRNRPAIARGAAGGGGRNRPAPYSRPKQLP 60
Query: 333 STWKHDMFND-FGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASV 509
W+HD+F+ FG +G T G KLLVSNLDFGVSD+DI+ELF+EFG LK A+V
Sbjct: 61 DKWQHDLFDSGFG-----GGAGVETGG--KLLVSNLDFGVSDADIQELFAEFGTLKKAAV 113
Query: 510 HYDRSGRSLGTADVVFERKADAVKAMKQYTGVPLDGRAM 626
HYDRSGRSLGTA+V FERKADA+KAMKQY G PLDGR M
Sbjct: 114 HYDRSGRSLGTANVHFERKADALKAMKQYNGFPLDGRPM 152
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 55.2 bits (127), Expect = 2e-07
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMK 590
T L V L ++ D++E+FS +G L +V YD R+GRS G A V FER D+ +AM+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 178
Query: 591 QYTGVPLDGR 620
+ G+ LDGR
Sbjct: 179 RANGMELDGR 188
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 55.2 bits (127), Expect = 2e-07
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMK 590
T L V L ++ D++E+FS +G L +V YD R+GRS G A V FER D+ +AM+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 178
Query: 591 QYTGVPLDGR 620
+ G+ LDGR
Sbjct: 179 RANGMELDGR 188
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 55.2 bits (127), Expect = 2e-07
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMK 590
T L V L ++ D++E+FS +G L +V YD R+GRS G A V FER D+ +AM+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 178
Query: 591 QYTGVPLDGR 620
+ G+ LDGR
Sbjct: 179 RANGMELDGR 188
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 55.2 bits (127), Expect = 2e-07
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMK 590
T L V L ++ D++E+FS +G L +V YD R+GRS G A V FER D+ +AM+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 178
Query: 591 QYTGVPLDGR 620
+ G+ LDGR
Sbjct: 179 RANGMELDGR 188
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 53.2 bits (122), Expect = 7e-07
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ V+NLDF V +KE+FS G +K A + D+ G+S G V FE+ +AV+A+ +
Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFN 294
Query: 600 GVPLDGRAM 626
G L R M
Sbjct: 295 GQFLFDRPM 303
Score = 42.7 bits (96), Expect = 0.001
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Frame = +3
Query: 228 GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGT--- 398
GGG G ++ +GG+ G +R ++ S + + + + + D G SG
Sbjct: 436 GGGMGGMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRER 493
Query: 399 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 578
I + ++ V NL F ++ +KE FS+ G + A + + +G+S G V F+ A
Sbjct: 494 IGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFDSPESAE 552
Query: 579 KAMKQYTGVPLDGR 620
KA + G+ + GR
Sbjct: 553 KACRIMNGIKISGR 566
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 53.2 bits (122), Expect = 7e-07
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ V+NLDF V +KE+FS G +K A + D+ G+S G V FE+ +AV+A+ +
Sbjct: 255 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFN 314
Query: 600 GVPLDGRAM 626
G L R M
Sbjct: 315 GQFLFDRPM 323
Score = 46.8 bits (106), Expect = 6e-05
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Frame = +3
Query: 177 IGGGAGRKFDANKR---TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 347
IGG AGR +N +G GG G ++ +GG+ G +R ++ S + + + +
Sbjct: 460 IGGFAGRIGSSNMGPVGSGISGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILER 517
Query: 348 DMFNDFGERKLQRNSGT---ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
+ D G SG I + ++ V NL F ++ +KE FS+ G + A + +
Sbjct: 518 SIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME 577
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDGR 620
+G+S G V F+ A KA + G+ + GR
Sbjct: 578 -NGKSKGCGTVRFDSPESAEKACRIMNGIKISGR 610
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ V+NLDF V +KE+FS G +K+ S D+ G+S G V FE+ +AV+A+ +
Sbjct: 182 IFVANLDFKVGWKKLKEVFSIAGTVKAGSYKEDKDGKSRGMGTVTFEQAIEAVQAISMFN 241
Query: 600 GVPLDGRAM 626
G L R M
Sbjct: 242 GQFLFDRPM 250
Score = 44.8 bits (101), Expect = 3e-04
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Frame = +3
Query: 177 IGGGAGRKFDANKR---TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 347
IGG GR +N +G GG G ++ +GG+ G +R ++ S + + + +
Sbjct: 387 IGGITGRIGSSNMGPVGSGISGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILER 444
Query: 348 DMFNDFGERKLQRNSGT---ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
+ D G SG I + ++ V NL F ++ +KE FS+ G + A + +
Sbjct: 445 SIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME 504
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDGR 620
+G+S G V F+ A KA + G+ + GR
Sbjct: 505 -NGKSKGCGTVRFDSPESAEKACRIMNGIKISGR 537
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/95 (33%), Positives = 52/95 (54%)
Frame = +3
Query: 342 KHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 521
K D + R +Q+ +G + G T + V+NLD+ V +KE+FS G++ A + D+
Sbjct: 145 KEDPDGEHARRAMQK-AGRL--GST-VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK 200
Query: 522 SGRSLGTADVVFERKADAVKAMKQYTGVPLDGRAM 626
G+S G V FE+ +AV+A+ + G L R M
Sbjct: 201 DGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPM 235
>BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like
(Drosophila) protein.
Length = 283
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +3
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 88
Query: 582 AMKQ 593
+++
Sbjct: 89 ILQE 92
>AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein.
Length = 289
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +3
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 35 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 94
Query: 582 AMKQ 593
+++
Sbjct: 95 ILQE 98
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 51.6 bits (118), Expect = 2e-06
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Frame = +3
Query: 195 RKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGER 374
R+ + R+G G+G + + R R+ ++S +YSR D H + R
Sbjct: 12 RESRSASRSGSAHGSGKSARHTPAKSRSRSHRR-SRSRSYSR-DYRRRHSHS-HSPMSTR 68
Query: 375 KLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADV 551
+ + L V L ++ D++E+FS++G + S+ YD +S RS G A V
Sbjct: 69 RRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 128
Query: 552 VFERKADAVKAMKQYTGVPLDGR 620
FE DA +A ++ G+ LDGR
Sbjct: 129 YFENVDDAKEAKERANGMELDGR 151
>AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
Homo sapiens germline specific RNA binding protein
(DAZL1) mRNA. ).
Length = 339
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +3
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 35 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 94
Query: 582 AMKQ 593
+++
Sbjct: 95 ILQE 98
>AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens
cDNA FLJ25370 fis, clone TST01870. ).
Length = 283
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +3
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 88
Query: 582 AMKQ 593
+++
Sbjct: 89 ILQE 92
>AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein.
Length = 283
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +3
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 88
Query: 582 AMKQ 593
+++
Sbjct: 89 ILQE 92
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/95 (33%), Positives = 52/95 (54%)
Frame = +3
Query: 342 KHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 521
K D + R +Q+ +G + G T + V+NLD+ V +KE+FS G++ A + D+
Sbjct: 145 KEDPDGECARRAMQK-AGRL--GST-VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK 200
Query: 522 SGRSLGTADVVFERKADAVKAMKQYTGVPLDGRAM 626
G+S G V FE+ +AV+A+ + G L R M
Sbjct: 201 DGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPM 235
>AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +3
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 88
Query: 582 AMKQ 593
+++
Sbjct: 89 ILQE 92
>X72018-1|CAA50897.1| 570|Homo sapiens ORF protein.
Length = 570
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ V+NLD+ V +KE+FS G++ A + D+ G+S G V FE+ +AV+A+ +
Sbjct: 46 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFN 105
Query: 600 GVPLDGRAM 626
G L R M
Sbjct: 106 GQLLFDRPM 114
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ V+NLD+ V +KE+FS G++ A + D+ G+S G V FE+ +AV+A+ +
Sbjct: 205 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFN 264
Query: 600 GVPLDGRAM 626
G L R M
Sbjct: 265 GQLLFDRPM 273
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ V+NLD+ V +KE+FS G++ A + D+ G+S G V FE+ +AV+A+ +
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFN 265
Query: 600 GVPLDGRAM 626
G L R M
Sbjct: 266 GQLLFDRPM 274
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ V+NLD+ V +KE+FS G++ A + D+ G+S G V FE+ +AV+A+ +
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFN 265
Query: 600 GVPLDGRAM 626
G L R M
Sbjct: 266 GQLLFDRPM 274
>AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear
ribonucleoprotein M isoform a variant protein.
Length = 615
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ V+NLD+ V +KE+FS G++ A + D+ G+S G V FE+ +AV+A+ +
Sbjct: 106 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFN 165
Query: 600 GVPLDGRAM 626
G L R M
Sbjct: 166 GQLLFDRPM 174
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N + D +K+LF +FG S V D SG+S G V FER DA KA+ +
Sbjct: 166 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 225
Query: 594 YTGVPLDGR 620
G L+G+
Sbjct: 226 MNGKELNGK 234
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N + D +K+LF +FG S V D SG+S G V FER DA KA+ +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 594 YTGVPLDGR 620
G L+G+
Sbjct: 251 MNGKELNGK 259
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N + D +K+LF +FG S V D SG+S G V FER DA KA+ +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 594 YTGVPLDGR 620
G L+G+
Sbjct: 251 MNGKELNGK 259
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N + D +K+LF +FG S V D SG+S G V FER DA KA+ +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 594 YTGVPLDGR 620
G L+G+
Sbjct: 251 MNGKELNGK 259
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 50.4 bits (115), Expect = 5e-06
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N + D +K+LF +FG S V D SG+S G V FER DA KA+ +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 594 YTGVPLDGR 620
G L+G+
Sbjct: 251 MNGKELNGK 259
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 2 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 61
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 62 MNGKEISGK 70
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 594 YTGVPLDGR 620
G + G+
Sbjct: 251 MNGKEISGK 259
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 387 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 566
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 174 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 231
Query: 567 ADAVKAMKQYTGVPLDGR 620
ADA +A ++ G ++GR
Sbjct: 232 ADADRAREKLHGTVVEGR 249
>CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein.
Length = 376
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 387 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 566
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 160
Query: 567 ADAVKAMKQYTGVPLDGR 620
ADA +A ++ G ++GR
Sbjct: 161 ADADRAREKLHGTVVEGR 178
>BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif protein
9 protein.
Length = 380
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 387 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 566
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 160
Query: 567 ADAVKAMKQYTGVPLDGR 620
ADA +A ++ G ++GR
Sbjct: 161 ADADRAREKLHGTVVEGR 178
>AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif protein
9 protein.
Length = 390
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 387 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 566
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 113 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 170
Query: 567 ADAVKAMKQYTGVPLDGR 620
ADA +A ++ G ++GR
Sbjct: 171 ADADRAREKLHGTVVEGR 188
>AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif protein
9 protein.
Length = 398
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 387 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 566
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 111 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 168
Query: 567 ADAVKAMKQYTGVPLDGR 620
ADA +A ++ G ++GR
Sbjct: 169 ADADRAREKLHGTVVEGR 186
>AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 387 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 566
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 161
Query: 567 ADAVKAMKQYTGVPLDGR 620
ADA +A ++ G ++GR
Sbjct: 162 ADADRAREKLHGTVVEGR 179
>AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 387 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 566
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 161
Query: 567 ADAVKAMKQYTGVPLDGR 620
ADA +A ++ G ++GR
Sbjct: 162 ADADRAREKLHGTVVEGR 179
>AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 387 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 566
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 161
Query: 567 ADAVKAMKQYTGVPLDGR 620
ADA +A ++ G ++GR
Sbjct: 162 ADADRAREKLHGTVVEGR 179
>AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein.
Length = 450
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 387 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 566
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 173 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 230
Query: 567 ADAVKAMKQYTGVPLDGR 620
ADA +A ++ G ++GR
Sbjct: 231 ADADRAREKLHGTVVEGR 248
>AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide binding
protein 2 protein.
Length = 380
Score = 49.2 bits (112), Expect = 1e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 387 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 566
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 160
Query: 567 ADAVKAMKQYTGVPLDGR 620
ADA +A ++ G ++GR
Sbjct: 161 ADADRAREKLHGTVVEGR 178
>BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protein 1
protein.
Length = 395
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 195 KLHGTVVEGR 204
>AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif protein
9 protein.
Length = 370
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 110 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 168
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 169 KLHGTVVEGR 178
>AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
Length = 397
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 116 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 174
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 175 KLHGTVVEGR 184
>AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protein
variant 1 protein.
Length = 370
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 116 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 174
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 175 KLHGTVVEGR 184
>AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 195 KLHGTVVEGR 204
>AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 195 KLHGTVVEGR 204
>AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 195 KLHGTVVEGR 204
>AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 195 KLHGTVVEGR 204
>AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 195 KLHGTVVEGR 204
>AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protein
protein.
Length = 377
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 96 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 154
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 155 KLHGTVVEGR 164
>AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 195 KLHGTVVEGR 204
>AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protein 1
isoform 4 variant protein.
Length = 303
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 157 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 215
Query: 591 QYTGVPLDGR 620
+ G ++GR
Sbjct: 216 KLHGTVVEGR 225
>Z93241-3|CAI19835.1| 421|Homo sapiens protein ( Human DNA sequence
from clone RP1-222E13 on chromosome 22. ).
Length = 421
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 334 YNNRCLDGQPM 344
>DQ887818-1|ABI74675.1| 163|Homo sapiens POLDIP3 protein.
Length = 163
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 22 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 75
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 76 YNNRCLDGQPM 86
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYTGV 605
+ N + D +K+LF +FG S V D SG+S G V FER DA KA+ + G
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 606 PLDGR 620
L+G+
Sbjct: 255 ELNGK 259
>CR456456-1|CAG30342.1| 421|Homo sapiens dJ222E13.3 protein.
Length = 421
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 334 YNNRCLDGQPM 344
>BC095411-1|AAH95411.1| 421|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 421
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 334 YNNRCLDGQPM 344
>BC056912-1|AAH56912.2| 392|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 392
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 251 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 304
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 305 YNNRCLDGQPM 315
>BC049840-1|AAH49840.1| 421|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 421
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 334 YNNRCLDGQPM 344
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYTGV 605
+ N + D +K+LF +FG S V D SG+S G V FER DA KA+ + G
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 606 PLDGR 620
L+G+
Sbjct: 255 ELNGK 259
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYTGV 605
+ N + D +K+LF +FG S V D SG+S G V FER DA KA+ + G
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 606 PLDGR 620
L+G+
Sbjct: 255 ELNGK 259
>BC001488-1|AAH01488.2| 417|Homo sapiens POLDIP3 protein protein.
Length = 417
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 276 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 329
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 330 YNNRCLDGQPM 340
>AY422990-1|AAQ94604.1| 421|Homo sapiens RNA-binding protein P46
protein.
Length = 421
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 334 YNNRCLDGQPM 344
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYTGV 605
+ N + D +K+LF +FG S V D SG+S G V FER DA KA+ + G
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 606 PLDGR 620
L+G+
Sbjct: 255 ELNGK 259
>AL160112-1|CAB77059.1| 392|Homo sapiens hypothetical protein
protein.
Length = 392
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 251 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 304
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 305 YNNRCLDGQPM 315
>AL160111-1|CAB77058.1| 421|Homo sapiens hypothetical protein
protein.
Length = 421
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 334 YNNRCLDGQPM 344
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYTGV 605
+ N + D +K+LF +FG S V D SG+S G V FER DA KA+ + G
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 606 PLDGR 620
L+G+
Sbjct: 255 ELNGK 259
>AB055760-1|BAB33368.2| 424|Homo sapiens KIAA1649 protein protein.
Length = 424
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 283 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 336
Query: 594 YTGVPLDGRAM 626
Y LDG+ M
Sbjct: 337 YNNRCLDGQPM 347
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQYTG 602
V L ++ D++E+FS++G + S+ YD +S RS G A V FE DA +A ++ G
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 603 VPLDGR 620
+ LDGR
Sbjct: 182 MELDGR 187
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQYTG 602
V L ++ D++E+FS++G + S+ YD +S RS G A V FE DA +A ++ G
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 603 VPLDGR 620
+ LDGR
Sbjct: 182 MELDGR 187
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQYTG 602
V L ++ D++E+FS++G + S+ YD +S RS G A V FE DA +A ++ G
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 603 VPLDGR 620
+ LDGR
Sbjct: 182 MELDGR 187
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQYTG 602
V L ++ D++E+FS++G + S+ YD +S RS G A V FE DA +A ++ G
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 603 VPLDGR 620
+ LDGR
Sbjct: 182 MELDGR 187
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQYTG 602
V L ++ D++E+FS++G + S+ YD +S RS G A V FE DA +A ++ G
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 603 VPLDGR 620
+ LDGR
Sbjct: 182 MELDGR 187
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQYTG 602
V L ++ D++E+FS++G + S+ YD +S RS G A V FE DA +A ++ G
Sbjct: 22 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 81
Query: 603 VPLDGR 620
+ LDGR
Sbjct: 82 MELDGR 87
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQYTG 602
V L ++ D++E+FS++G + S+ YD +S RS G A V FE DA +A ++ G
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 603 VPLDGR 620
+ LDGR
Sbjct: 182 MELDGR 187
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQYTG 602
V L ++ D++E+FS++G + S+ YD +S RS G A V FE DA +A ++ G
Sbjct: 110 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 169
Query: 603 VPLDGR 620
+ LDGR
Sbjct: 170 MELDGR 175
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + V N+ + D +KELF E+G +S V D SG+S G V +E A KA+
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258
Query: 594 YTGVPLDGRAM 626
G +DG+ +
Sbjct: 259 LHGKSIDGKVL 269
Score = 36.7 bits (81), Expect = 0.067
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +3
Query: 405 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 584
+G + + NLD + + + LFS FG + S V D +G S G A V F+ A A +A
Sbjct: 103 SGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRA 161
Query: 585 MKQYTGVPLDGR 620
+ GV L+ R
Sbjct: 162 IWHMNGVRLNNR 173
Score = 36.3 bits (80), Expect = 0.089
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ + NLD ++D +KE FS FG + A V + G+ G V F +A KA+ +
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 362
Query: 600 G 602
G
Sbjct: 363 G 363
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + V N+ + D +KELF E+G +S V D SG+S G V +E A KA+
Sbjct: 35 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 94
Query: 594 YTGVPLDGRAM 626
G +DG+ +
Sbjct: 95 LHGKSIDGKVL 105
Score = 36.3 bits (80), Expect = 0.089
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ + NLD ++D +KE FS FG + A V + G+ G V F +A KA+ +
Sbjct: 140 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 198
Query: 600 G 602
G
Sbjct: 199 G 199
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + V N+ + D +KELF E+G +S V D SG+S G V +E A KA+
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258
Query: 594 YTGVPLDGRAM 626
G +DG+ +
Sbjct: 259 LHGKSIDGKVL 269
Score = 36.7 bits (81), Expect = 0.067
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +3
Query: 405 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 584
+G + + NLD + + + LFS FG + S V D +G S G A V F+ A A +A
Sbjct: 103 SGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRA 161
Query: 585 MKQYTGVPLDGR 620
+ GV L+ R
Sbjct: 162 IWHMNGVRLNNR 173
Score = 36.3 bits (80), Expect = 0.089
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ + NLD ++D +KE FS FG + A V + G+ G V F +A KA+ +
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 362
Query: 600 G 602
G
Sbjct: 363 G 363
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + V N+ + D +KELF E+G +S V D SG+S G V +E A KA+
Sbjct: 184 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 243
Query: 594 YTGVPLDGRAM 626
G +DG+ +
Sbjct: 244 LHGKSIDGKVL 254
Score = 36.7 bits (81), Expect = 0.067
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +3
Query: 405 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 584
+G + + NLD + + + LFS FG + S V D +G S G A V F+ A A +A
Sbjct: 88 SGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRA 146
Query: 585 MKQYTGVPLDGR 620
+ GV L+ R
Sbjct: 147 IWHMNGVRLNNR 158
Score = 36.3 bits (80), Expect = 0.089
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ + NLD ++D +KE FS FG + A V + G+ G V F +A KA+ +
Sbjct: 289 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 347
Query: 600 G 602
G
Sbjct: 348 G 348
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + V N+ + D +KELF E+G +S V D SG+S G V +E A KA+
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258
Query: 594 YTGVPLDGRAM 626
G +DG+ +
Sbjct: 259 LHGKSIDGKVL 269
Score = 36.7 bits (81), Expect = 0.067
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +3
Query: 405 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 584
+G + + NLD + + + LFS FG + S V D +G S G A V F+ A A +A
Sbjct: 103 SGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRA 161
Query: 585 MKQYTGVPLDGR 620
+ GV L+ R
Sbjct: 162 IWHMNGVRLNNR 173
Score = 36.3 bits (80), Expect = 0.089
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
+ + NLD ++D +KE FS FG + A V + G+ G V F +A KA+ +
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 362
Query: 600 G 602
G
Sbjct: 363 G 363
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 46.4 bits (105), Expect = 8e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + V NL V + +++LFS+FG + S V D SG S V FE+ +A KA+
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 594 YTGVPLDGRAM 626
G + GR +
Sbjct: 251 MNGKEVSGRLL 261
Score = 29.9 bits (64), Expect = 7.7
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A + F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 46.4 bits (105), Expect = 8e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + V NL V + +++LFS+FG + S V D SG S V FE+ +A KA+
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 594 YTGVPLDGRAM 626
G + GR +
Sbjct: 251 MNGKEVSGRLL 261
Score = 39.5 bits (88), Expect = 0.010
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
L V NLD + D +++ FS +G++ SA V G S G V F +A KA+ +
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKV-MTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 600 G 602
G
Sbjct: 355 G 355
Score = 29.9 bits (64), Expect = 7.7
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A + F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 46.4 bits (105), Expect = 8e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + V NL V + +++LFS+FG + S V D SG S V FE+ +A KA+
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 594 YTGVPLDGRAM 626
G + GR +
Sbjct: 251 MNGKEVSGRLL 261
Score = 29.9 bits (64), Expect = 7.7
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A + F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 46.4 bits (105), Expect = 8e-05
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + V NL V + +++LFS+FG + S V D SG S V FE+ +A KA+
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 594 YTGVPLDGRAM 626
G + GR +
Sbjct: 251 MNGKEVSGRLL 261
Score = 39.5 bits (88), Expect = 0.010
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
L V NLD + D +++ FS +G++ SA V G S G V F +A KA+ +
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKV-MTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 600 G 602
G
Sbjct: 355 G 355
Score = 29.9 bits (64), Expect = 7.7
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A + F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 45.6 bits (103), Expect = 1e-04
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P KL + L+ ++ +K +F + G + + DR+ +S G A + FE ADA A K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 591 QYTGVPLDGRAM 626
G L G+A+
Sbjct: 67 DMNGTSLHGKAI 78
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 351 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 527
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 528 RSLGTADVVFERKADAVKAMKQ 593
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 351 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 527
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 528 RSLGTADVVFERKADAVKAMKQ 593
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 351 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 527
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 528 RSLGTADVVFERKADAVKAMKQ 593
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 351 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 527
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 528 RSLGTADVVFERKADAVKAMKQ 593
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 351 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 527
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 528 RSLGTADVVFERKADAVKAMKQ 593
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 11 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 69
Query: 351 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 527
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 70 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 127
Query: 528 RSLGTADVVFERKADAVKAMKQ 593
RS G V+F+ K M Q
Sbjct: 128 RSRGFGFVLFKESESVDKVMDQ 149
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 351 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 527
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 528 RSLGTADVVFERKADAVKAMKQ 593
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 351 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 527
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 528 RSLGTADVVFERKADAVKAMKQ 593
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 351 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 527
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 528 RSLGTADVVFERKADAVKAMKQ 593
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 44.8 bits (101), Expect = 3e-04
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P KL + L+ ++ +K +F + G + + DR+ +S G A + FE ADA A K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 591 QYTGVPLDGRAM 626
G L G+A+
Sbjct: 67 DMNGKSLHGKAI 78
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 44.8 bits (101), Expect = 3e-04
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P KL + L+ ++ +K +F + G + + DR+ +S G A + FE ADA A K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 591 QYTGVPLDGRAM 626
G L G+A+
Sbjct: 67 DMNGKSLHGKAI 78
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 44.8 bits (101), Expect = 3e-04
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P KL + L+ ++ +K +F + G + + DR+ +S G A + FE ADA A K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 591 QYTGVPLDGRAM 626
G L G+A+
Sbjct: 67 DMNGKSLHGKAI 78
>BC026077-1|AAH26077.1| 161|Homo sapiens RBMY2FP protein protein.
Length = 161
Score = 44.8 bits (101), Expect = 3e-04
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 590
P K + L+ ++ K +F++ G + + DR+ +S G A FE ADA A K
Sbjct: 7 PGKHFIGGLNRENNEKMFKAVFAKHGPISEVLLIKDRTSKSRGFAFTTFENTADAKNAAK 66
Query: 591 QYTGVPLDGRAM 626
G PLDG+A+
Sbjct: 67 HMIGKPLDGKAI 78
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 44.0 bits (99), Expect = 4e-04
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
LL NL + V+ ++KE+F + ++ S + G+S G A + F+ +ADA K ++
Sbjct: 395 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQ 450
Query: 600 GVPLDGRAM 626
G +DGR++
Sbjct: 451 GTEIDGRSI 459
Score = 35.5 bits (78), Expect = 0.16
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 405 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 538
Query: 582 AMKQYTGVPLDGRAM 626
A+ ++GRA+
Sbjct: 539 ALNSCNKREIEGRAI 553
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 44.0 bits (99), Expect = 4e-04
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
LL NL + V+ ++KE+F + ++ S + G+S G A + F+ +ADA K ++
Sbjct: 372 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQ 427
Query: 600 GVPLDGRAM 626
G +DGR++
Sbjct: 428 GTEIDGRSI 436
Score = 34.3 bits (75), Expect = 0.36
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 405 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 459 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 515
Query: 582 AMKQYTGVPLDGRAM 626
A+ + GRA+
Sbjct: 516 ALNSCNKREIGGRAI 530
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 44.0 bits (99), Expect = 4e-04
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
LL NL + V+ ++KE+F + ++ S + G+S G A + F+ +ADA K ++
Sbjct: 395 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQ 450
Query: 600 GVPLDGRAM 626
G +DGR++
Sbjct: 451 GTEIDGRSI 459
Score = 35.5 bits (78), Expect = 0.16
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 405 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 538
Query: 582 AMKQYTGVPLDGRAM 626
A+ ++GRA+
Sbjct: 539 ALNSCNKREIEGRAI 553
>X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein.
Length = 419
Score = 43.6 bits (98), Expect = 6e-04
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 596
KL + L+ ++ +K +F + G + + DR+ +S G A + FE ADA A K
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDM 68
Query: 597 TGVPLDGRAM 626
G L G+A+
Sbjct: 69 NGTSLHGKAI 78
>BC014533-1|AAH14533.3| 211|Homo sapiens MYEF2 protein protein.
Length = 211
Score = 43.2 bits (97), Expect = 8e-04
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Frame = +3
Query: 228 GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGT--- 398
GGG G ++ +GG+ G +R ++ S + + + + + D G SG
Sbjct: 71 GGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRER 128
Query: 399 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 578
I + ++ V NL F ++ +KE FS+ G + A + + +G+S G V F+ A
Sbjct: 129 IGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFDSPESAE 187
Query: 579 KAMKQYTGVPLDGR 620
KA + G+ + GR
Sbjct: 188 KACRIMNGIKISGR 201
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 43.2 bits (97), Expect = 8e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR----SLGTADVVFERKADAVKAM 587
L + NL+F ++ +KE+FS+ G +KS S+ ++ S+G V + + A KA+
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 791
Query: 588 KQYTGVPLDGRAM 626
KQ G +DG +
Sbjct: 792 KQLQGHVVDGHKL 804
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 43.2 bits (97), Expect = 8e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR----SLGTADVVFERKADAVKAM 587
L + NL+F ++ +KE+FS+ G +KS S+ ++ S+G V + + A KA+
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 791
Query: 588 KQYTGVPLDGRAM 626
KQ G +DG +
Sbjct: 792 KQLQGHVVDGHKL 804
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 43.2 bits (97), Expect = 8e-04
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYT 599
LL NL + V+ ++KE+F + ++ S + G S G A + F+ +ADA K ++
Sbjct: 288 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGNSKGIAYIEFKTEADAEKTFEEKQ 343
Query: 600 GVPLDGRAM 626
G +DGR++
Sbjct: 344 GTEIDGRSI 352
Score = 35.5 bits (78), Expect = 0.16
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 405 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 375 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 431
Query: 582 AMKQYTGVPLDGRAM 626
A+ ++GRA+
Sbjct: 432 ALNSCNKREIEGRAI 446
>AK002075-1|BAA92070.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ11213 fis, clone PLACE1007969, weakly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 188
Score = 43.2 bits (97), Expect = 8e-04
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Frame = +3
Query: 228 GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGT--- 398
GGG G ++ +GG+ G +R ++ S + + + + + D G SG
Sbjct: 48 GGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRER 105
Query: 399 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 578
I + ++ V NL F ++ +KE FS+ G + A + + +G+S G V F+ A
Sbjct: 106 IGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFDSPESAE 164
Query: 579 KAMKQYTGVPLDGR 620
KA + G+ + GR
Sbjct: 165 KACRIMNGIKISGR 178
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 43.2 bits (97), Expect = 8e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR----SLGTADVVFERKADAVKAM 587
L + NL+F ++ +KE+FS+ G +KS S+ ++ S+G V + + A KA+
Sbjct: 745 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 804
Query: 588 KQYTGVPLDGRAM 626
KQ G +DG +
Sbjct: 805 KQLQGHVVDGHKL 817
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 41.5 bits (93), Expect = 0.002
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +3
Query: 414 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
T + + N + D +K+LF G S V D SG+S G V FER DA KA+ +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 247
Query: 594 YTGVPLDGR 620
G L+G+
Sbjct: 248 MNGKELNGK 256
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 596
+L++ NL F S+ D+K +F++FG + ++ G+ G V F+ +A KA+K
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGM 174
Query: 597 TGVPLDGRAM 626
+ GR +
Sbjct: 175 NMKEIKGRTV 184
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 596
+L++ NL F S+ D+K +F++FG + ++ G+ G V F+ +A KA+K
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGM 174
Query: 597 TGVPLDGRAM 626
+ GR +
Sbjct: 175 NMKEIKGRTV 184
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 596
+L++ NL F S+ D+K +F++FG + ++ G+ G V F+ +A KA+K
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGM 174
Query: 597 TGVPLDGRAM 626
+ GR +
Sbjct: 175 NMKEIKGRTV 184
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ + ++ F ++G + + DR + +S G A V FE ADA A+
Sbjct: 1 PGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAV 60
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 61 RDMNGKSLDGKAI 73
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.003
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Frame = +3
Query: 228 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 398
G + S+RSG R+ + S + S R N + +R +
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
Query: 399 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 572
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 215
Query: 573 AVKAMKQYTGVPLDGR 620
A KA+K G +DG+
Sbjct: 216 AEKALKHMDGGQIDGQ 231
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.003
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Frame = +3
Query: 228 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 398
G + S+RSG R+ + S + S R N + +R +
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
Query: 399 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 572
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 215
Query: 573 AVKAMKQYTGVPLDGR 620
A KA+K G +DG+
Sbjct: 216 AEKALKHMDGGQIDGQ 231
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.003
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Frame = +3
Query: 228 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 398
G + S+RSG R+ + S + S R N + +R +
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
Query: 399 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 572
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 215
Query: 573 AVKAMKQYTGVPLDGR 620
A KA+K G +DG+
Sbjct: 216 AEKALKHMDGGQIDGQ 231
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.003
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Frame = +3
Query: 228 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 398
G + S+RSG R+ + S + S R N + +R +
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
Query: 399 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 572
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 215
Query: 573 AVKAMKQYTGVPLDGR 620
A KA+K G +DG+
Sbjct: 216 AEKALKHMDGGQIDGQ 231
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 41.1 bits (92), Expect = 0.003
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Frame = +3
Query: 228 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 398
G + S+RSG R+ + S + S R N + +R +
Sbjct: 73 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 132
Query: 399 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 572
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 133 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 192
Query: 573 AVKAMKQYTGVPLDGR 620
A KA+K G +DG+
Sbjct: 193 AEKALKHMDGGQIDGQ 208
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 41.1 bits (92), Expect = 0.003
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Frame = +3
Query: 228 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 398
G + S+RSG R+ + S + S R N + +R +
Sbjct: 19 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 78
Query: 399 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 572
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 79 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 138
Query: 573 AVKAMKQYTGVPLDGR 620
A KA+K G +DG+
Sbjct: 139 AEKALKHMDGGQIDGQ 154
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.003
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Frame = +3
Query: 228 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 398
G + S+RSG R+ + S + S R N + +R +
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
Query: 399 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 572
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 215
Query: 573 AVKAMKQYTGVPLDGR 620
A KA+K G +DG+
Sbjct: 216 AEKALKHMDGGQIDGQ 231
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 40.7 bits (91), Expect = 0.004
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 16/162 (9%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGR----GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 347
GGG G++ + GR GGG+G NRS G R RGG RG + +
Sbjct: 208 GGGYGQQDRGGRGRGRSSGGGGGSGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DR 262
Query: 348 DMFNDFG---ERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS------ 500
FN FG ++ + +S + + V L V+ + + F + GI+K+
Sbjct: 263 GGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQ 322
Query: 501 --ASVHYDR-SGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
+++ DR +G+ G A V F+ A A+ + G G
Sbjct: 323 PMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSG 364
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 392 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 446
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
G G G + ++G GGG G+ GG RGR+ GG
Sbjct: 191 GSGGGGGYGNQDQSG-GGGGGYGQQDRGGRGRGRSSGG 227
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 40.7 bits (91), Expect = 0.004
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + L+ + ++ F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein
protein.
Length = 492
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 597 TGVPLDGR 620
V +D R
Sbjct: 302 DNVLIDDR 309
>BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein.
Length = 387
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 597 TGVPLDGR 620
V +D R
Sbjct: 302 DNVLIDDR 309
>BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein.
Length = 434
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 597 TGVPLDGR 620
V +D R
Sbjct: 302 DNVLIDDR 309
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 40.3 bits (90), Expect = 0.005
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 597 TGVPLDGRAM 626
G GRA+
Sbjct: 78 NGREFSGRAL 87
>BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 597 TGVPLDGR 620
V +D R
Sbjct: 302 DNVLIDDR 309
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 40.3 bits (90), Expect = 0.005
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 597 TGVPLDGRAM 626
G GRA+
Sbjct: 78 NGREFSGRAL 87
>AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 597 TGVPLDGR 620
V +D R
Sbjct: 302 DNVLIDDR 309
>AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 40.3 bits (90), Expect = 0.005
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 597 TGVPLDGR 620
V +D R
Sbjct: 302 DNVLIDDR 309
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 597 TGVPLDGRAM 626
G GRA+
Sbjct: 78 NGREFSGRAL 87
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 597 TGVPLDGRAM 626
G GRA+
Sbjct: 78 NGREFSGRAL 87
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 597 TGVPLDGRAM 626
G GRA+
Sbjct: 78 NGREFSGRAL 87
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 597 TGVPLDGRAM 626
G GRA+
Sbjct: 78 NGREFSGRAL 87
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 39.9 bits (89), Expect = 0.007
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Frame = +3
Query: 240 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 419
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 597 TGVPLDGRAM 626
LDGR +
Sbjct: 132 EH-RLDGRVI 140
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 76
Query: 597 TGVPLDGRAM 626
G GRA+
Sbjct: 77 NGREFSGRAL 86
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 597 TGVPLDGRAM 626
G GRA+
Sbjct: 78 NGREFSGRAL 87
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 39.9 bits (89), Expect = 0.007
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Frame = +3
Query: 240 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 419
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 597 TGVPLDGRAM 626
LDGR +
Sbjct: 132 EH-RLDGRVI 140
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 39.9 bits (89), Expect = 0.007
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Frame = +3
Query: 240 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 419
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 597 TGVPLDGRAM 626
LDGR +
Sbjct: 132 EH-RLDGRVI 140
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 39.9 bits (89), Expect = 0.007
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Frame = +3
Query: 240 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 419
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 597 TGVPLDGRAM 626
LDGR +
Sbjct: 132 EH-RLDGRVI 140
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 39.9 bits (89), Expect = 0.007
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Frame = +3
Query: 240 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 419
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 597 TGVPLDGRAM 626
LDGR +
Sbjct: 132 EH-RLDGRVI 140
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 39.9 bits (89), Expect = 0.007
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Frame = +3
Query: 240 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 419
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 597 TGVPLDGRAM 626
LDGR +
Sbjct: 132 EH-RLDGRVI 140
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 39.9 bits (89), Expect = 0.007
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Frame = +3
Query: 240 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 419
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 597 TGVPLDGRAM 626
LDGR +
Sbjct: 132 EH-RLDGRVI 140
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 426 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYTG 602
V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+ G
Sbjct: 11 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 70
Query: 603 VPLDGRAM 626
GRA+
Sbjct: 71 REFSGRAL 78
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 39.1 bits (87), Expect = 0.013
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 587
P KL + + + ++ F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGFNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAA 66
Query: 588 KQYTGVPLDGRAM 626
+ G LDG+A+
Sbjct: 67 RDMNGKSLDGKAI 79
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 39.1 bits (87), Expect = 0.013
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 390 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERK 566
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R S G A ++F K
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 567 ADAVKAMKQYTGVPLDGRAM 626
A + L GR +
Sbjct: 62 DSAQNCTRAINNKQLFGRVI 81
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 39.1 bits (87), Expect = 0.013
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 390 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERK 566
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R S G A ++F K
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 567 ADAVKAMKQYTGVPLDGRAM 626
A + L GR +
Sbjct: 62 DSAQNCTRAINNKQLFGRVI 81
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 39.1 bits (87), Expect = 0.013
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 390 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERK 566
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R S G A ++F K
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 567 ADAVKAMKQYTGVPLDGRAM 626
A + L GR +
Sbjct: 62 DSAQNCTRAINNKQLFGRVI 81
>AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein
protein.
Length = 318
Score = 39.1 bits (87), Expect = 0.013
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 596
KL + L+ ++ +KE+F++ G L + R+ +S ++FE ADA A +
Sbjct: 9 KLFIGGLNREANEKVLKEVFAKHGPLLEVLLIKGRTSKSRDFVVIIFENAADAKNAARDM 68
Query: 597 TGVPLDGR 620
G LDG+
Sbjct: 69 NGKSLDGK 76
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 39.1 bits (87), Expect = 0.013
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 390 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERK 566
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R S G A ++F K
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 567 ADAVKAMKQYTGVPLDGRAM 626
A + L GR +
Sbjct: 62 DSAQNCTRAINNKQLFGRVI 81
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 38.3 bits (85), Expect = 0.022
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 401
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 554
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 286
Query: 555 FERKADAVKAMKQYTGVPLDG 617
F+ A A+ + G G
Sbjct: 287 FDDPPSAKAAIDWFDGKEFHG 307
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1)
ribonucleoprotein protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.022
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 597 TGVPLDGR 620
G +DGR
Sbjct: 165 DGKKIDGR 172
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 38.3 bits (85), Expect = 0.022
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +3
Query: 405 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 584
T L V NL VS+ ++E FS+FG ++ A V D GRS G V F K A KA
Sbjct: 368 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKA 427
Query: 585 MKQ 593
++
Sbjct: 428 FER 430
>X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5
protein.
Length = 396
Score = 38.3 bits (85), Expect = 0.022
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +3
Query: 405 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 584
T L V NL VS+ ++E FS+FG ++ A V D GRS G V F K A KA
Sbjct: 57 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKA 116
Query: 585 MKQ 593
++
Sbjct: 117 FER 119
>X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for
hU1-70K snRNP protein (RNP8). ).
Length = 301
Score = 38.3 bits (85), Expect = 0.022
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 56 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 115
Query: 597 TGVPLDGR 620
G +DGR
Sbjct: 116 DGKKIDGR 123
>X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for U1
RNA-associated 70K protein. ).
Length = 614
Score = 38.3 bits (85), Expect = 0.022
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 282 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 341
Query: 597 TGVPLDGR 620
G +DGR
Sbjct: 342 DGKKIDGR 349
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 38.3 bits (85), Expect = 0.022
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQ 593
K+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128
Query: 594 YTGVPLDGRAM 626
LDGR +
Sbjct: 129 KEH-RLDGRVI 138
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 38.3 bits (85), Expect = 0.022
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 401
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 554
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 289
Query: 555 FERKADAVKAMKQYTGVPLDG 617
F+ A A+ + G G
Sbjct: 290 FDDPPSAKAAIDWFDGKEFHG 310
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 38.3 bits (85), Expect = 0.022
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQ 593
K+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128
Query: 594 YTGVPLDGRAM 626
LDGR +
Sbjct: 129 KEH-RLDGRVI 138
>M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen
protein.
Length = 428
Score = 38.3 bits (85), Expect = 0.022
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 597 TGVPLDGR 620
G +DGR
Sbjct: 165 DGKKIDGR 172
>M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen
protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.022
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 597 TGVPLDGR 620
G +DGR
Sbjct: 165 DGKKIDGR 172
>M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small
nuclear ribonucleoprotein 70 kd protein mRNA, complete
cds. ).
Length = 437
Score = 38.3 bits (85), Expect = 0.022
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 597 TGVPLDGR 620
G +DGR
Sbjct: 165 DGKKIDGR 172
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 38.3 bits (85), Expect = 0.022
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +3
Query: 405 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 584
T L V NL VS+ ++E FS+FG ++ A V D GRS G V F K A KA
Sbjct: 368 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKA 427
Query: 585 MKQ 593
++
Sbjct: 428 FER 430
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 38.3 bits (85), Expect = 0.022
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 401
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 554
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 289
Query: 555 FERKADAVKAMKQYTGVPLDG 617
F+ A A+ + G G
Sbjct: 290 FDDPPSAKAAIDWFDGKEFHG 310
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 38.3 bits (85), Expect = 0.022
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +3
Query: 405 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 584
T L V NL VS+ ++E FS+FG ++ A V D GRS G V F K A KA
Sbjct: 368 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKA 427
Query: 585 MKQ 593
++
Sbjct: 428 FER 430
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 38.3 bits (85), Expect = 0.022
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +3
Query: 405 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 584
T L V NL VS+ ++E FS+FG ++ A V D GRS G V F K A KA
Sbjct: 295 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKA 354
Query: 585 MKQ 593
++
Sbjct: 355 FER 357
>BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear
ribonucleoprotein 70kDa polypeptide (RNP antigen)
protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.022
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 596
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 597 TGVPLDGR 620
G +DGR
Sbjct: 165 DGKKIDGR 172
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 38.3 bits (85), Expect = 0.022
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 401
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 554
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 286
Query: 555 FERKADAVKAMKQYTGVPLDG 617
F+ A A+ + G G
Sbjct: 287 FDDPPSAKAAIDWFDGKEFHG 307
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 38.3 bits (85), Expect = 0.022
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +3
Query: 405 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 584
T L V NL VS+ ++E FS+FG ++ A V D GRS G V F K A KA
Sbjct: 368 THAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKA 427
Query: 585 MKQ 593
++
Sbjct: 428 FER 430
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 38.3 bits (85), Expect = 0.022
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
+ V ++ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 597 TGVPLDGRAM 626
G GRA+
Sbjct: 78 NGREFSGRAL 87
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 38.3 bits (85), Expect = 0.022
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 401
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 554
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 286
Query: 555 FERKADAVKAMKQYTGVPLDG 617
F+ A A+ + G G
Sbjct: 287 FDDPPSAKAAIDWFDGKEFHG 307
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 38.3 bits (85), Expect = 0.022
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 401
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 402 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 554
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 289
Query: 555 FERKADAVKAMKQYTGVPLDG 617
F+ A A+ + G G
Sbjct: 290 FDDPPSAKAAIDWFDGKEFHG 310
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 37.9 bits (84), Expect = 0.029
Identities = 18/62 (29%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
L +S L ++ D++++FS FG + ++ V D+ +G S G A + F+++++A +A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 597 TG 602
G
Sbjct: 168 NG 169
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 37.9 bits (84), Expect = 0.029
Identities = 18/62 (29%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
L +S L ++ D++++FS FG + ++ V D+ +G S G A + F+++++A +A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 597 TG 602
G
Sbjct: 168 NG 169
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 37.9 bits (84), Expect = 0.029
Identities = 18/62 (29%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 596
L +S L ++ D++++FS FG + ++ V D+ +G S G A + F+++++A +A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 597 TG 602
G
Sbjct: 168 NG 169
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 37.5 bits (83), Expect = 0.038
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
L V NL VS+ +++ FS+FG ++ A V D GR+ G V F K A KA+++
Sbjct: 122 LTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALER 179
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 37.5 bits (83), Expect = 0.038
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
L V NL VS+ +++ FS+FG ++ A V D GR+ G V F K A KA+++
Sbjct: 158 LTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALER 215
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 37.5 bits (83), Expect = 0.038
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
L V NL VS+ +++ FS+FG ++ A V D GR+ G V F K A KA+++
Sbjct: 158 LTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALER 215
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 37.5 bits (83), Expect = 0.038
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
L V NL VS+ +++ FS+FG ++ A V D GR+ G V F K A KA+++
Sbjct: 158 LTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALER 215
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 37.5 bits (83), Expect = 0.038
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
L V NL VS+ +++ FS+FG ++ A V D GR+ G V F K A KA+++
Sbjct: 122 LTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALER 179
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 37.5 bits (83), Expect = 0.038
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
L V NL VS+ +++ FS+FG ++ A V D GR+ G V F K A KA+++
Sbjct: 158 LTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALER 215
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 37.5 bits (83), Expect = 0.038
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 420 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 593
L V NL VS+ +++ FS+FG ++ A V D GR+ G V F K A KA+++
Sbjct: 158 LTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALER 215
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 37.1 bits (82), Expect = 0.051
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 392
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 222 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 276
Query: 393 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 545
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 277 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 336
Query: 546 DVVFERKADAVKAMKQYTGVPLDG 617
V F+ A A+ + G G
Sbjct: 337 TVSFDDPPSAKAAIDWFDGKEFSG 360
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 388 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 442
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 186 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 223
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.051
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 293
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 323
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 37.1 bits (82), Expect = 0.051
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 392
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 393 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 545
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 546 DVVFERKADAVKAMKQYTGVPLDG 617
V F+ A A+ + G G
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSG 361
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.051
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 293
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 323
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.051
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 293
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 323
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 37.1 bits (82), Expect = 0.051
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 392
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 393 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 545
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 546 DVVFERKADAVKAMKQYTGVPLDG 617
V F+ A A+ + G G
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSG 361
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.051
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 293
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 323
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 37.1 bits (82), Expect = 0.051
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 392
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 393 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 545
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 546 DVVFERKADAVKAMKQYTGVPLDG 617
V F+ A A+ + G G
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSG 361
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.051
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 293
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 323
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 37.1 bits (82), Expect = 0.051
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 392
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 393 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 545
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 546 DVVFERKADAVKAMKQYTGVPLDG 617
V F+ A A+ + G G
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSG 361
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.051
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 293
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 323
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 37.1 bits (82), Expect = 0.051
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 392
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 393 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 545
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 546 DVVFERKADAVKAMKQYTGVPLDG 617
V F+ A A+ + G G
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSG 361
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 37.1 bits (82), Expect = 0.051
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 392
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 393 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 545
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 546 DVVFERKADAVKAMKQYTGVPLDG 617
V F+ A A+ + G G
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSG 361
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 37.1 bits (82), Expect = 0.051
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 392
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 222 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 276
Query: 393 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 545
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 277 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 336
Query: 546 DVVFERKADAVKAMKQYTGVPLDG 617
V F+ A A+ + G G
Sbjct: 337 TVSFDDPPSAKAAIDWFDGKEFSG 360
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 388 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 442
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 186 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 223
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 37.1 bits (82), Expect = 0.051
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +3
Query: 222 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 392
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 393 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 545
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 546 DVVFERKADAVKAMKQYTGVPLDG 617
V F+ A A+ + G G
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSG 361
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 350
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 293
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 37.1 bits (82), Expect = 0.051
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 293
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 323
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 37.1 bits (82), Expect = 0.051
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 293
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 6 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 44
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 323
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 28 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 70
>BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.067
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 126 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 305
+IE D +N + RIG +GR + + GR GG R +R G + G + G +S
Sbjct: 349 EIEEYYDGNTSSNSRQRIGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 407
Query: 306 TNYSR 320
N +R
Sbjct: 408 GNRNR 412
>BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementation
factor protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 293
>AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 293
>AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 293
>AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 215 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 268
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 269 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 301
>AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 293
>AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 293
>AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 215 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 268
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 269 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 301
>AK000324-1|BAA91086.1| 431|Homo sapiens protein ( Homo sapiens
cDNA FLJ20317 fis, clone HEP08678. ).
Length = 431
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 52 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 105
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 106 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 138
>AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 293
>AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 293
>AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementation
factor related protein protein.
Length = 569
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 190 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 243
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 244 RVKKIRDYAFVHFSNRKDAVEAMKALNGKVLDG 276
>AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementation
factor protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 261 RVKKIRDYAFVHFSNRKDAVEAMKALNGKVLDG 293
>AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementation
factor protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.089
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +3
Query: 339 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 518
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 519 RSGRSLGTADVVFERKADAVKAMKQYTGVPLDG 617
R + A V F + DAV+AMK G LDG
Sbjct: 261 RVKKIRDYAFVHFSNRKDAVEAMKALNGKVLDG 293
>BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein family
A, member 1 (H/ACA small nucleolar RNPs) protein.
Length = 217
Score = 35.9 bits (79), Expect = 0.12
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 302
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Score = 33.1 bits (72), Expect = 0.83
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 174 RIGGGAGRKFDANKRTGR-GGGAGFRSNRSGGVQRGR 281
R GGG G R GR GGG GFR R GG RGR
Sbjct: 180 RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF-RGR 215
Score = 30.7 bits (66), Expect = 4.4
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 293
GGG G + GRGG G GFR R GG G RGG
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG--GGGFRGG 207
>AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein family A
member 1 protein.
Length = 199
Score = 35.9 bits (79), Expect = 0.12
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 302
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGDNFRGGGRGGFGRGGGRGGFNK 60
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGR 281
GGG G + GRGGG GFR R GG RGR
Sbjct: 170 GGGRG-----GRGGGRGGGGGFRGGRGGGF-RGR 197
>AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein.
Length = 217
Score = 35.9 bits (79), Expect = 0.12
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 302
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Score = 33.1 bits (72), Expect = 0.83
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 174 RIGGGAGRKFDANKRTGR-GGGAGFRSNRSGGVQRGR 281
R GGG G R GR GGG GFR R GG RGR
Sbjct: 180 RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF-RGR 215
Score = 30.7 bits (66), Expect = 4.4
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 293
GGG G + GRGG G GFR R GG G RGG
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG--GGGFRGG 207
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 35.5 bits (78), Expect = 0.16
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 405 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 254 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 310
Query: 582 AMKQYTGVPLDGRAM 626
A+ ++GRA+
Sbjct: 311 ALNSCNKREIEGRAI 325
Score = 33.5 bits (73), Expect = 0.63
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 516 DRSGRSLGTADVVFERKADAVKAMKQYTGVPLDGRAM 626
D G+S G A + F+ +ADA K ++ G +DGR++
Sbjct: 195 DEDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 231
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 35.5 bits (78), Expect = 0.16
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 405 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 254 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 310
Query: 582 AMKQYTGVPLDGRAM 626
A+ ++GRA+
Sbjct: 311 ALNSCNKREIEGRAI 325
Score = 33.5 bits (73), Expect = 0.63
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 516 DRSGRSLGTADVVFERKADAVKAMKQYTGVPLDGRAM 626
D G+S G A + F+ +ADA K ++ G +DGR++
Sbjct: 195 DEDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 231
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 35.5 bits (78), Expect = 0.16
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 405 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 581
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 254 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 310
Query: 582 AMKQYTGVPLDGRAM 626
A+ ++GRA+
Sbjct: 311 ALNSCNKREIEGRAI 325
Score = 33.5 bits (73), Expect = 0.63
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 516 DRSGRSLGTADVVFERKADAVKAMKQYTGVPLDGRAM 626
D G+S G A + F+ +ADA K ++ G +DGR++
Sbjct: 195 DEDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 231
>U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein.
Length = 449
Score = 35.1 bits (77), Expect = 0.21
Identities = 41/137 (29%), Positives = 59/137 (43%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMF 356
IG GAG F+ +R GGG G + GG G G S + R D+N +
Sbjct: 222 IGRGAG--FERMRRGAYGGGYGGYDDY-GGYNDGYGFG----SDRFGR-DLNYCFSGMSD 273
Query: 357 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 536
+ +G+ S TTG + + L + +++DI FS ++ + GR
Sbjct: 274 HRYGDGGSSFQS---TTGHC-VHMRGLPYRATENDIYNFFSPLNPMR-VHIEIGPDGRVT 328
Query: 537 GTADVVFERKADAVKAM 587
G ADV F DAV AM
Sbjct: 329 GEADVEFATHEDAVAAM 345
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQ 593
K+ + L + + D+K+ FS+FG + ++ D +GRS G V+F+ K M Q
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQ 593
K+ + L + + D+K+ FS+FG + ++ D +GRS G V+F+ K M Q
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQ 593
K+ + L + + D+K+ FS+FG + ++ D +GRS G V+F+ K M Q
Sbjct: 7 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 66
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 417 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQ 593
K+ + L + + D+K+ FS+FG + ++ D +GRS G V+F+ K M Q
Sbjct: 10 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 69
>BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 35.1 bits (77), Expect = 0.21
Identities = 41/137 (29%), Positives = 59/137 (43%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMF 356
IG GAG F+ +R GGG G + GG G G S + R D+N +
Sbjct: 222 IGRGAG--FERMRRGAYGGGYGGYDDY-GGYNDGYGFG----SDRFGR-DLNYCFSGMSD 273
Query: 357 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 536
+ +G+ S TTG + + L + +++DI FS ++ + GR
Sbjct: 274 HRYGDGGSSFQS---TTGHC-VHMRGLPYRATENDIYNFFSPLNPMR-VHIEIGPDGRVT 328
Query: 537 GTADVVFERKADAVKAM 587
G ADV F DAV AM
Sbjct: 329 GEADVEFATHEDAVAAM 345
>BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 35.1 bits (77), Expect = 0.21
Identities = 41/137 (29%), Positives = 59/137 (43%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMF 356
IG GAG F+ +R GGG G + GG G G S + R D+N +
Sbjct: 222 IGRGAG--FERMRRGAYGGGYGGYDDY-GGYNDGYGFG----SDRFGR-DLNYCFSGMSD 273
Query: 357 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 536
+ +G+ S TTG + + L + +++DI FS ++ + GR
Sbjct: 274 HRYGDGGSSFQS---TTGHC-VHMRGLPYRATENDIYNFFSPLNPMR-VHIEIGPDGRVT 328
Query: 537 GTADVVFERKADAVKAM 587
G ADV F DAV AM
Sbjct: 329 GEADVEFATHEDAVAAM 345
>BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase
activation inhibitor protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.21
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 323
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase
activation inhibitor protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.21
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +3
Query: 180 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 323
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 35.1 bits (77), Expect = 0.21
Identities = 41/137 (29%), Positives = 59/137 (43%)
Frame = +3
Query: 177 IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMF 356
IG GAG F+ +R GGG G + GG G G S + R D+N +
Sbjct: 222 IGRGAG--FERMRRGAYGGGYGGYDDY-GGYNDGYGFG----SDRFGR-DLNYCFSGMSD 273
Query: 357 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 536
+ +G+ S TTG + + L + +++DI FS ++ + GR
Sbjct: 274 HRYGDGGSSFQS---TTGHC-VHMRGLPYRATENDIYNFFSPLNPMR-VHIEIGPDGRVT 328
Query: 537 GTADVVFERKADAVKAM 587
G ADV F DAV AM
Sbjct: 329 GEADVEFATHEDAVAAM 345
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,228,132
Number of Sequences: 237096
Number of extensions: 1910802
Number of successful extensions: 7098
Number of sequences better than 10.0: 457
Number of HSP's better than 10.0 without gapping: 5148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6633
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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