Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f14r
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   1.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   3.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.7  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   6.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.5  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 363 ALIGYLRGEKNFNCLDALIEQIRED 289
           AL  +  G+  F  +DA++ Q+RE+
Sbjct: 339 ALAKWANGQTGFPWIDAIMTQLREE 363


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 84  WFNFKRIDPQITSKEISKQFTSR 16
           W NF+RI  ++T K++S  F ++
Sbjct: 162 WVNFERIYYKLTKKKLSVFFGNK 184


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 471 VANIGWCPFYQNKEMSV 421
           VA + +C FYQNK + V
Sbjct: 91  VATVFFCLFYQNKLIEV 107


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 478 IYRSCVNLSPSIINTWLQTF 537
           + R+  N+   I+NTW+  F
Sbjct: 295 VTRTGANIKKLIVNTWISLF 314


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 408 MHNFQGDFYGSNLKIALIGYLRGE 337
           M +F G   G  +K  LIG +R E
Sbjct: 431 MDDFSGTVCGGQVKYPLIGAMREE 454


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = +2

Query: 578 GHPSSLEPLPK 610
           G+P+S++PLP+
Sbjct: 23  GYPASVQPLPR 33


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 62  IPKSLVRKLANNSHQEL 12
           IP+SLV KL +  HQ L
Sbjct: 124 IPESLVIKLVDYHHQLL 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,380
Number of Sequences: 336
Number of extensions: 3443
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)