Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f14r
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    23   6.1  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.0  
DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.    23   8.0  

>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -1

Query: 576 TANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVANIGWCPFYQNKEMSVE 418
           T N PL+  + LP+G     Y G   + T P  E V    W  F +  E+S E
Sbjct: 176 TLNKPLDPARLLPEGKAYWTYLG--SLTTPPCSESVT---WILFKEPIEVSHE 223


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 363 ALIGYLRGEKNFNCLDALIEQIRED 289
           AL  +  G+  F  +DA++ Q+RE+
Sbjct: 326 ALAKWASGQTGFPWIDAIMTQLREE 350


>DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 357 IGYLRGEKNFNCLDALIEQIREDIKNSE 274
           +GY  G+ N  C D + + I   IK S+
Sbjct: 93  VGYKGGKCNMKCEDLVTDDITNAIKCSK 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,568
Number of Sequences: 2352
Number of extensions: 12536
Number of successful extensions: 49
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)