Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f14r
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70686-5|CAA94613.1|  135|Caenorhabditis elegans Hypothetical pr...   124   7e-29
Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical pr...    31   0.90 
Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical pr...    31   0.90 
AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical ...    30   1.2  
AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z66561-1|CAA91454.1|  635|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical pr...    27   8.4  
L16560-5|AAA27996.1|  443|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AF106577-14|AAC78187.1|   68|Caenorhabditis elegans Hypothetical...    27   8.4  

>Z70686-5|CAA94613.1|  135|Caenorhabditis elegans Hypothetical
           protein R10H10.6 protein.
          Length = 135

 Score =  124 bits (298), Expect = 7e-29
 Identities = 60/115 (52%), Positives = 76/115 (66%)
 Frame = -1

Query: 627 GEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVANIGWCP 448
           GEVV+GFGRG KELGCPTAN    VV  LP+GL  GVY+G A++D G  Y+M  +IGW P
Sbjct: 10  GEVVRGFGRGGKELGCPTANMDGTVVNGLPEGLPVGVYFGTAKLD-GKSYKMAMSIGWNP 68

Query: 447 FYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQIREDIK 283
            YQN++ +VE H++     DFYG  L   +IG++R  K+F  LD L   I  DIK
Sbjct: 69  QYQNEKKTVELHLIDYSGSDFYGKTLSAVIIGFIREMKSFESLDELKSAIAMDIK 123


>Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical
           protein T11G6.2b protein.
          Length = 495

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 427 HLFILVKRTPSYICYHLIYRSCVNLSPSIINTWL 528
           H+FI V    SY   H   ++   + PS+I+TW+
Sbjct: 28  HVFIFVHTFMSYAMLHATRKTLSTVKPSLIHTWI 61


>Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical
           protein T11G6.2a protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 427 HLFILVKRTPSYICYHLIYRSCVNLSPSIINTWL 528
           H+FI V    SY   H   ++   + PS+I+TW+
Sbjct: 35  HVFIFVHTFMSYAMLHATRKTLSTVKPSLIHTWI 68


>AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical
           protein F18A12.8b protein.
          Length = 816

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 483 VYEMVANIGWCPFYQNKEMSVETHIMHN 400
           +Y ++  + W PF+Q+   S  TH+ HN
Sbjct: 411 LYNLLPQVDWVPFFQSIAPSDLTHLFHN 438


>AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical
           protein F18A12.8a protein.
          Length = 848

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 483 VYEMVANIGWCPFYQNKEMSVETHIMHN 400
           +Y ++  + W PF+Q+   S  TH+ HN
Sbjct: 411 LYNLLPQVDWVPFFQSIAPSDLTHLFHN 438


>Z66561-1|CAA91454.1|  635|Caenorhabditis elegans Hypothetical
           protein F08G12.1 protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 297 REDIKNSEQNLKQPSAQSLRNHSF 226
           R +I  SE N  QP++++ R HSF
Sbjct: 330 RANIDQSENNATQPASETTRKHSF 353


>Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical
           protein C08B6.2 protein.
          Length = 430

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -1

Query: 366 IALIGYLRGEKNFNCLDALIEQIREDIKNSEQNLKQ 259
           IA+  Y R   N     + ++ + E I+ +EQN K+
Sbjct: 3   IAIFQYFRKRSNSKFCGSFLQNVTESIRENEQNYKK 38


>L16560-5|AAA27996.1|  443|Caenorhabditis elegans Hypothetical
           protein D2007.5 protein.
          Length = 443

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 291 DIKNSEQNLKQPSAQSLRNHSF 226
           D++NS +   +PS   LRNHSF
Sbjct: 274 DVQNSYEEDHKPSLADLRNHSF 295


>AF106577-14|AAC78187.1|   68|Caenorhabditis elegans Hypothetical
           protein F46F5.8 protein.
          Length = 68

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -1

Query: 573 ANYPLEVVKSLPKGLEP 523
           ANYP  VV S PKGL P
Sbjct: 35  ANYPRAVVDSHPKGLRP 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,772,541
Number of Sequences: 27780
Number of extensions: 295828
Number of successful extensions: 721
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)