Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f14f
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0301 - 16619499-16619675,16619770-16619853,16619932-166200... 132 2e-31
10_04_0002 - 7372425-7372601,7372697-7372780,7372859-7373010,737... 130 9e-31
01_06_0917 + 32978306-32978434,32978570-32978645,32979324-329793... 32 0.45
11_01_0574 + 4582098-4582331,4582450-4582492,4582683-4582757,458... 31 0.59
01_06_0916 + 32950575-32950656,32952061-32952272,32952408-329524... 31 0.59
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 31 0.78
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13... 29 4.2
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 28 7.3
03_06_0463 + 34121421-34121560,34121728-34121812,34122129-341224... 27 9.7
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 27 9.7
01_01_0638 - 4819365-4819685,4819702-4819882,4820018-4820073,482... 27 9.7
>10_08_0301 -
16619499-16619675,16619770-16619853,16619932-16620083,
16620296-16620391,16620473-16620627,16620791-16620856,
16620993-16621062,16621175-16621305,16622121-16622307,
16622410-16622485
Length = 397
Score = 132 bits (320), Expect = 2e-31
Identities = 58/139 (41%), Positives = 88/139 (63%)
Frame = +1
Query: 4 GEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVANIGWCP 183
G V+KGFGRGSK LG PTAN P E + GVY+GWA + T +++MV +IGW P
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLPAENFSDVLSEHTSGVYFGWAGLSTRGIFKMVMSIGWNP 302
Query: 184 FYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQIREDIKNSEQN 363
++ N E ++E ++H+F DFYG L++ ++GY+R E NF L++LIE+I ED + S++
Sbjct: 303 YFDNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDARISDKA 362
Query: 364 LKQPSAQSLRNHSFFNKSM 420
L P ++ + S+
Sbjct: 363 LNLPLYAKYKDSPYLRNSL 381
>10_04_0002 -
7372425-7372601,7372697-7372780,7372859-7373010,
7373229-7373324,7373406-7373554,7373723-7373788,
7373925-7373994,7374106-7374236,7376464-7376471,
7377946-7378002
Length = 329
Score = 130 bits (314), Expect = 9e-31
Identities = 58/139 (41%), Positives = 86/139 (61%)
Frame = +1
Query: 4 GEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMVANIGWCP 183
G V+KGFGRGSK LG PTAN P E + VY+GWA + T +Y+MV +IGW P
Sbjct: 175 GSVIKGFGRGSKVLGIPTANLPAENFSDVLSEHTSRVYFGWAGLSTRGIYKMVMSIGWNP 234
Query: 184 FYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQIREDIKNSEQN 363
++ N E ++E ++H+F DFYG L++ ++GY+R E NF L++LIE+I ED + +E+
Sbjct: 235 YFDNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIERIHEDARIAEKA 294
Query: 364 LKQPSAQSLRNHSFFNKSM 420
L P + + S+
Sbjct: 295 LNLPLYAKYTDSPYLRNSL 313
>01_06_0917 +
32978306-32978434,32978570-32978645,32979324-32979391,
32979868-32979959,32980121-32980194,32980372-32980415,
32980752-32980803,32981200-32981319,32981391-32981503,
32981674-32981761,32982144-32982229,32982832-32982918,
32983149-32983252,32983607-32983709,32983861-32983956,
32984067-32984256,32984352-32984413,32984560-32984664,
32985163-32985364,32985473-32985681,32986413-32986537,
32986644-32986695,32986772-32986858,32987125-32987247,
32987375-32987629
Length = 913
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +1
Query: 166 NIGWCPFYQNKE----MSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQI 333
NIG C + K + + ++ ++ Y +NL + L+ Y G+++ +C+ + +E +
Sbjct: 177 NIGSCETLETKPKERGLDIRQELLKFYEN--YSANL-MHLVVY--GKESLDCIQSFVEHM 231
Query: 334 REDIKNSEQ-NLKQPSAQSLRNH 399
DIKN++Q + K PS H
Sbjct: 232 FSDIKNTDQRSFKCPSQPLSEEH 254
>11_01_0574 +
4582098-4582331,4582450-4582492,4582683-4582757,
4584344-4584465,4584547-4584654,4585975-4586119,
4586786-4586869,4586997-4587345,4587527-4587666,
4587784-4588037,4588409-4588576,4588686-4588976,
4589329-4589538,4589778-4589860,4590288-4590414,
4593624-4595516,4596274-4596395,4596487-4596628,
4596719-4596940,4597489-4597563,4598351-4598452,
4598616-4598819
Length = 1730
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 166 NIGWCPFYQNKEMSVETHIMHNFQG---DFYGSNLKIALIGYLRGEKN 300
+IG F + KE+ V++H+ + + D Y SN +I+L+G+ E +
Sbjct: 339 DIGAPSFQETKELQVDSHVAEDSEAEDDDLYLSNCRISLVGFEEKESS 386
>01_06_0916 +
32950575-32950656,32952061-32952272,32952408-32952448,
32952916-32952959,32953259-32953561,32954145-32954302,
32954849-32954965,32955562-32955747,32955872-32956031,
32956079-32956151,32958613-32958889,32959024-32959099,
32960653-32960720,32961270-32961361,32961505-32961578,
32961777-32961820,32962155-32962206,32962585-32962704,
32962777-32962889,32963023-32963110,32963492-32963577,
32964172-32964258,32964491-32964594,32964996-32965098,
32965250-32965345,32965456-32965645,32965777-32965838,
32966014-32966118,32966782-32966983,32967092-32967300,
32968510-32968673,32968799-32968850,32968935-32969021,
32969319-32969441,32969567-32969605,32969606-32969860
Length = 1447
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 247 YGSNLKIALIGYLRGEKNFNCLDALIEQIREDIKNSEQ-NLKQPSAQSLRNH 399
Y +NL + L+ Y G+++ +C+ + +E++ DIKN++Q + K PS H
Sbjct: 714 YSANL-MHLVVY--GKESLDCIQSFVERLFSDIKNTDQRSFKCPSQPLSEQH 762
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 31.1 bits (67), Expect = 0.78
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 109 GVYYGWAQVDTGPVYEMVANIGW 177
G+++GWA+ + G V V +IGW
Sbjct: 269 GIFFGWAKPEAGGVSRSVISIGW 291
>06_01_0007 +
130582-131544,132187-132264,132615-132732,133228-133271,
133389-133448,133536-133588,133671-133837,133963-134167,
134989-135046,135225-135281,135363-135608,135938-136002,
136090-136158,136238-136331,136467-136607,137159-137304,
137452-138110,138222-138335,138406-138560
Length = 1163
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 12 SQGFW-KRF*GTRMPNS*LSFGSCKI--FTKRFGARCLLWMGS 131
++G W +F T++P L F S RFG CL+W+ S
Sbjct: 789 AEGIWMNKFGFTKIPQEQLDFWSVSWVGIIARFGRACLMWLSS 831
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 145 PVYEMVANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALI 324
P+ ++V++IG ++ +V+ +M + G N KIAL+G L GEK D++
Sbjct: 3553 PLIKLVSSIGEQEIDSQQKDAVQ-QMMVSLPGPTGKVNRKIALLGVLYGEKCKAAFDSVS 3611
Query: 325 EQIR 336
+ ++
Sbjct: 3612 KSVQ 3615
>03_06_0463 +
34121421-34121560,34121728-34121812,34122129-34122428,
34123194-34123352,34123852-34123992,34124078-34124134,
34124534-34124672,34124954-34125058,34125159-34125376,
34125980-34126021,34126136-34126309
Length = 519
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 166 NIGWCPFYQNKEMSVETHIMHNF 234
N +CPF + KE VE H+ H++
Sbjct: 452 NKDFCPFEEFKEKIVEPHLKHDY 474
>03_06_0030 +
31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/77 (23%), Positives = 31/77 (40%)
Frame = +1
Query: 184 FYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDALIEQIREDIKNSEQN 363
F NKE S E H+ +F+ +N K +K + R N + +
Sbjct: 331 FNYNKEYSKEKHLDEGTSSNFFAANAKTKQEEKQLIDKGKQVSSIHVFTPRYSDANPQMS 390
Query: 364 LKQPSAQSLRNHSFFNK 414
+K +S N+ FF++
Sbjct: 391 MKGVDGRSASNNQFFHQ 407
>01_01_0638 -
4819365-4819685,4819702-4819882,4820018-4820073,
4820107-4820148,4820484-4820639,4820681-4820809,
4821072-4821254,4821374-4821524,4821670-4821848
Length = 465
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +1
Query: 25 GRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEMV--ANIGWCPFY--- 189
G G ++ G L V LP G E G++YG +D G V ++G +
Sbjct: 36 GAGLEKEGGSRVKMLLSYVDKLPTGREDGLFYG---LDLGGTNFRVLKVHLGGSKKHVVN 92
Query: 190 -QNKEMSVETHIMHNFQGDFYG 252
+++E+S+ H+M + +G
Sbjct: 93 SESREVSIPPHLMSGTSSELFG 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,493,608
Number of Sequences: 37544
Number of extensions: 306334
Number of successful extensions: 623
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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