Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f14f
(644 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 27 0.21
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 26 0.27
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 26 0.27
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 26 0.27
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 26 0.27
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 26 0.27
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 26 0.27
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 26 0.27
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 25 0.83
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 1.9
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 4.4
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 4.4
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.6 bits (56), Expect = 0.21
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 428 SMINNYNWMRYIRYPISKSI*SYKNINKYQIIY*KEIAI 544
S+ NNYN+ Y Y + + +YK + Y I Y ++I I
Sbjct: 84 SLSNNYNYSNYNNYNNNNNYNNYKKL-YYNINYIEQIPI 121
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 428 SMINNYNWMRYIRYPISKSI*SYKNINKYQIIY*KEIAI 544
S+ NNYN+ Y Y + + +YK + Y I Y ++I +
Sbjct: 84 SLSNNYNYSNYNNYNNNNNYNNYKKL-YYNINYIEQIPV 121
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 428 SMINNYNWMRYIRYPISKSI*SYKNINKYQIIY*KEIAI 544
S+ NNYN+ Y Y + + +YK + Y I Y ++I +
Sbjct: 84 SLSNNYNYSNYNNYNNNNNYNNYKKL-YYNINYIEQIPV 121
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 428 SMINNYNWMRYIRYPISKSI*SYKNINKYQIIY*KEIAI 544
S+ NNYN+ Y Y + + +YK + Y I Y ++I +
Sbjct: 84 SLSNNYNYSNYNNYNNNNNYNNYKKL-YYNINYIEQIPV 121
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 428 SMINNYNWMRYIRYPISKSI*SYKNINKYQIIY*KEIAI 544
S+ NNYN+ Y Y + + +YK + Y I Y ++I +
Sbjct: 84 SLSNNYNYSNYNNYNNNNNYNNYKKL-YYNINYIEQIPV 121
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 428 SMINNYNWMRYIRYPISKSI*SYKNINKYQIIY*KEIAI 544
S+ NNYN+ Y Y + + +YK + Y I Y ++I +
Sbjct: 84 SLSNNYNYSNYNNYNNNNNYNNYKKL-YYNINYIEQIPV 121
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 428 SMINNYNWMRYIRYPISKSI*SYKNINKYQIIY*KEIAI 544
S+ NNYN+ Y Y + + +YK + Y I Y ++I +
Sbjct: 84 SLSNNYNYSNYNNYNNNNNYNNYKKL-YYNINYIEQIPV 121
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 428 SMINNYNWMRYIRYPISKSI*SYKNINKYQIIY*KEIAI 544
S+ NNYN+ Y Y + + +YK + Y I Y ++I +
Sbjct: 84 SLSNNYNYSNYNNYNNNNNYNNYKKL-YYNINYIEQIPV 121
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 24.6 bits (51), Expect = 0.83
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 72 GSCKIFTKRFGARCLLWMG 128
GS +++TK GA+ LL MG
Sbjct: 152 GSWEVYTKGIGAKLLLQMG 170
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 43 LGCPTANYPLEVVK 84
L CP A YP+E +K
Sbjct: 538 LKCPVAGYPIEEIK 551
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 43 LGCPTANYPLEVVK 84
L CP A YP+E +K
Sbjct: 538 LKCPVAGYPIEEIK 551
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 268 ALIGYLRGEKNFNCLDALIEQIRED 342
AL + G+ F +DA++ Q+RE+
Sbjct: 343 ALAKWANGQTGFPWIDAIMTQLREE 367
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -2
Query: 169 YLLPSHIQVLCQLEPIHNKHLAPNLLVKILQL 74
YL H+++ E HNK L + K L +
Sbjct: 785 YLCAGHVRLPYTFEQFHNKELLWTSVKKALMI 816
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -2
Query: 169 YLLPSHIQVLCQLEPIHNKHLAPNLLVKILQL 74
YL H+++ E HNK L + K L +
Sbjct: 823 YLCAGHVRLPYTFEQFHNKELLWTSVKKALMI 854
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,407
Number of Sequences: 438
Number of extensions: 3854
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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