Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f13r
         (301 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    26   0.076
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    26   0.076
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.31 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   5.0  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    20   6.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    19   8.7  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 26.2 bits (55), Expect = 0.076
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -2

Query: 258 CFYFMY--YLHDLYYNIM*LMRRDFFYIIYYSLLTSRVPNVMFYIKIIKNSFVCNIKFTK 85
           CF++ Y  Y+  ++ NIM L     F I Y+ +      N  F++ ++K   V     TK
Sbjct: 123 CFFWSYQSYMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNFAFFV-VVKMLLVRYRNLTK 181

Query: 84  Q 82
           Q
Sbjct: 182 Q 182



 Score = 19.8 bits (39), Expect = 6.6
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 256 FLFYVLFT*SVL*YYVINEKRFFLYYIL*FVNF 158
           ++ Y+      L +Y      +F  Y+L FVNF
Sbjct: 131 YMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNF 163


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 26.2 bits (55), Expect = 0.076
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -2

Query: 258 CFYFMY--YLHDLYYNIM*LMRRDFFYIIYYSLLTSRVPNVMFYIKIIKNSFVCNIKFTK 85
           CF++ Y  Y+  ++ NIM L     F I Y+ +      N  F++ ++K   V     TK
Sbjct: 123 CFFWSYQSYMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNFAFFV-VVKMLLVRYRNLTK 181

Query: 84  Q 82
           Q
Sbjct: 182 Q 182



 Score = 19.8 bits (39), Expect = 6.6
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 256 FLFYVLFT*SVL*YYVINEKRFFLYYIL*FVNF 158
           ++ Y+      L +Y      +F  Y+L FVNF
Sbjct: 131 YMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNF 163


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.31
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -2

Query: 261 MCFYFMYYLHDLY--YNIM*LMRRDFFYIIYY 172
           +C Y+ YY+H L+    I+  M   F   IYY
Sbjct: 256 VCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 150 PNVMFYIKIIKNSFVCNIKFTKQE 79
           P + FY K IK      IKF ++E
Sbjct: 129 PIIAFYYKPIKTLNGHEIKFIRKE 152


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 189 FYIIYYSLLTSRVPNVMFYIKI 124
           F+++ Y+LL S V  V  Y+ I
Sbjct: 359 FFVVDYTLLYSIVGAVTTYLVI 380


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -1

Query: 289 ICKTSPKLRNVFLFYVLFT*SVL*YYVINEKRFFLYY 179
           IC+      N++   +L    V+  YV+N    FL Y
Sbjct: 229 ICELVDAFNNIYGLAMLEIIIVVITYVLNLTDLFLVY 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,502
Number of Sequences: 336
Number of extensions: 1192
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)