Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f13f
         (351 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IBH8 Cluster: Putative uncharacterized protein PF07_0...    33   1.8  
UniRef50_Q97VD0 Cluster: Putative uncharacterized protein; n=1; ...    32   2.4  
UniRef50_Q7P568 Cluster: Putative uncharacterized protein FNV083...    31   4.1  
UniRef50_A5ATH3 Cluster: Putative uncharacterized protein; n=1; ...    30   9.5  
UniRef50_Q7RAH5 Cluster: Putative uncharacterized protein PY0652...    30   9.5  
UniRef50_Q4YPS9 Cluster: Putative uncharacterized protein; n=1; ...    30   9.5  

>UniRef50_Q8IBH8 Cluster: Putative uncharacterized protein PF07_0116;
            n=2; cellular organisms|Rep: Putative uncharacterized
            protein PF07_0116 - Plasmodium falciparum (isolate 3D7)
          Length = 1923

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 14   SVKRHRN*EMCFYFMYYLHDLYYNIM*LMRRDFFYIIY 127
            S+ + +N E C   +Y+L+ LY N+  +  + FFY+ Y
Sbjct: 1262 SLLKKKNKESCIMCIYFLYPLYMNLEDIDFKTFFYLFY 1299


>UniRef50_Q97VD0 Cluster: Putative uncharacterized protein; n=1;
           Sulfolobus solfataricus|Rep: Putative uncharacterized
           protein - Sulfolobus solfataricus
          Length = 347

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = +1

Query: 1   LHEYICKTSPKLRNVFLFYVLFT*SVL*YYVINEKRFFLYYIL*FVNFT 147
           L++Y+ K +PKL + FL++  F+  +   Y ++   + +YYIL    FT
Sbjct: 63  LYDYVVKFTPKLSSYFLYFWFFSYFLYLSYTVD---YIVYYILNLDGFT 108


>UniRef50_Q7P568 Cluster: Putative uncharacterized protein FNV0838;
           n=1; Fusobacterium nucleatum subsp. vincentii ATCC
           49256|Rep: Putative uncharacterized protein FNV0838 -
           Fusobacterium nucleatum subsp. vincentii ATCC 49256
          Length = 272

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 53  FMYYLHDLYYNIM*LMRRDFFYIIYYSLLTSRVPNVMFYIKIIKNSF 193
           + YYL + Y  I+  +    F+I+ YS L   +   +FY K    SF
Sbjct: 80  YFYYLGEKYIEILLFLSLLLFFILVYSFLLFLIEEDLFYFKYTLISF 126


>UniRef50_A5ATH3 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 226

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +2

Query: 50  YFMYYLHDLYYNIM*LMRRDFFYIIYYSLLTSRVPNVMFYIKIIKNSFVCNIK 208
           Y  Y   ++++N +  +  DF   +Y  +L + +PN    I+++ ++FV N+K
Sbjct: 33  YLGYAEENVFFNQLSFVEIDFDDEVYVLILLTSLPNNWEPIRVVVSNFVRNVK 85


>UniRef50_Q7RAH5 Cluster: Putative uncharacterized protein PY06525;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY06525 - Plasmodium yoelii
           yoelii
          Length = 490

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 122 IYYSLLTSRVPNVMFYIKIIKNSFVCNIKFTKQE 223
           +Y+  L + +PN M Y  + +N  +CNI F +++
Sbjct: 244 LYFKFLQNSIPN-MIYKNVKENKTICNITFFRED 276


>UniRef50_Q4YPS9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 89

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/60 (20%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +2

Query: 41  MCFYFMYYLHDLYYNIM*LMRRDFFYII--YYSLLTSRVPNVMFYIKIIKNSFVCNIKFT 214
           + + F Y++   +++   +  R F++I+  Y+      +    F+++ I N F  ++K+T
Sbjct: 17  LLYLFFYFIFYFFFSYFFISSRYFYFIVMFYFVFFAHIIFGAFFFLRNIYNVFQLSLKYT 76


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,604,197
Number of Sequences: 1657284
Number of extensions: 4220402
Number of successful extensions: 6619
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6592
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)