Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f11r
         (718 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U47101-1|AAC50885.1|  121|Homo sapiens NifU-like protein protein.      93   7e-19
BC061903-1|AAH61903.1|  167|Homo sapiens iron-sulfur cluster sca...    93   7e-19
BC011906-1|AAH11906.1|  167|Homo sapiens iron-sulfur cluster sca...    93   7e-19
AY009128-1|AAG37428.1|  167|Homo sapiens ISCU2 protein.                93   7e-19
AY009127-1|AAG37427.1|  142|Homo sapiens ISCU1 protein.                93   7e-19

>U47101-1|AAC50885.1|  121|Homo sapiens NifU-like protein protein.
          Length = 121

 Score = 93.5 bits (222), Expect = 7e-19
 Identities = 42/56 (75%), Positives = 49/56 (87%)
 Frame = -1

Query: 718 WXKGKPVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 551
           W KGK V+EAL +KNTDIAKEL LPPVKLHCSMLAEDAIKAAL+DY++KQ+ +  E
Sbjct: 62  WVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQEPKKGE 117


>BC061903-1|AAH61903.1|  167|Homo sapiens iron-sulfur cluster
           scaffold homolog (E. coli) protein.
          Length = 167

 Score = 93.5 bits (222), Expect = 7e-19
 Identities = 42/56 (75%), Positives = 49/56 (87%)
 Frame = -1

Query: 718 WXKGKPVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 551
           W KGK V+EAL +KNTDIAKEL LPPVKLHCSMLAEDAIKAAL+DY++KQ+ +  E
Sbjct: 108 WVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQEPKKGE 163


>BC011906-1|AAH11906.1|  167|Homo sapiens iron-sulfur cluster
           scaffold homolog (E. coli) protein.
          Length = 167

 Score = 93.5 bits (222), Expect = 7e-19
 Identities = 42/56 (75%), Positives = 49/56 (87%)
 Frame = -1

Query: 718 WXKGKPVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 551
           W KGK V+EAL +KNTDIAKEL LPPVKLHCSMLAEDAIKAAL+DY++KQ+ +  E
Sbjct: 108 WVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQEPKKGE 163


>AY009128-1|AAG37428.1|  167|Homo sapiens ISCU2 protein.
          Length = 167

 Score = 93.5 bits (222), Expect = 7e-19
 Identities = 42/56 (75%), Positives = 49/56 (87%)
 Frame = -1

Query: 718 WXKGKPVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 551
           W KGK V+EAL +KNTDIAKEL LPPVKLHCSMLAEDAIKAAL+DY++KQ+ +  E
Sbjct: 108 WVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQEPKKGE 163


>AY009127-1|AAG37427.1|  142|Homo sapiens ISCU1 protein.
          Length = 142

 Score = 93.5 bits (222), Expect = 7e-19
 Identities = 42/56 (75%), Positives = 49/56 (87%)
 Frame = -1

Query: 718 WXKGKPVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 551
           W KGK V+EAL +KNTDIAKEL LPPVKLHCSMLAEDAIKAAL+DY++KQ+ +  E
Sbjct: 83  WVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQEPKKGE 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,115,523
Number of Sequences: 237096
Number of extensions: 1499750
Number of successful extensions: 2125
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2125
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)