Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f11f
(645 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H1K1 Cluster: Iron-sulfur cluster assembly enzyme ISC... 236 3e-61
UniRef50_Q6CFQ0 Cluster: Iron sulfur cluster assembly protein 1,... 208 7e-53
UniRef50_Q9UTC6 Cluster: Iron sulfur cluster assembly protein 1,... 191 1e-47
UniRef50_A2QHV4 Cluster: Remark: alternate names for S. cerevisi... 190 2e-47
UniRef50_UPI0000E4A7B0 Cluster: PREDICTED: similar to NifU-like ... 180 3e-44
UniRef50_Q7QTV3 Cluster: GLP_76_35055_35693; n=4; Eukaryota|Rep:... 171 9e-42
UniRef50_Q4WNS3 Cluster: Iron-sulfur cofactor synthesis protein ... 165 1e-40
UniRef50_Q4N9C2 Cluster: NifU protein, putative; n=11; cellular ... 167 2e-40
UniRef50_Q6E0I7 Cluster: Iron-sulfur cluster assembly protein; n... 165 8e-40
UniRef50_Q0CL81 Cluster: Iron sulfur cluster assembly protein 1,... 163 4e-39
UniRef50_Q38DM2 Cluster: Iron-sulfur cluster assembly protein, p... 159 4e-38
UniRef50_Q896F6 Cluster: NifU protein; n=7; cellular organisms|R... 147 2e-34
UniRef50_Q8TME1 Cluster: NifU protein; n=24; cellular organisms|... 140 3e-32
UniRef50_O34393 Cluster: NifU protein; n=24; cellular organisms|... 130 4e-29
UniRef50_A4LX66 Cluster: Fe-S cluster assembly protein NifU; n=2... 127 3e-28
UniRef50_O67045 Cluster: NifU-like protein; n=4; cellular organi... 125 1e-27
UniRef50_Q4UGE0 Cluster: RNaseP-like protein with Nifu domain, p... 124 1e-27
UniRef50_P05340 Cluster: Nitrogen fixation protein nifU; n=17; B... 123 3e-27
UniRef50_Q8TSI9 Cluster: NifU family protein; n=5; Methanomicrob... 122 7e-27
UniRef50_P20628 Cluster: Nitrogen fixation protein nifU; n=24; B... 121 1e-26
UniRef50_Q2LWE9 Cluster: NifU-like protein involved in Fe-S clus... 120 3e-26
UniRef50_Q2RIL0 Cluster: Nitrogen-fixing NifU-like; n=3; Clostri... 116 6e-25
UniRef50_Q8KB04 Cluster: IscU protein; n=10; Chlorobiaceae|Rep: ... 111 2e-23
UniRef50_P05343 Cluster: Nitrogen fixation protein nifU; n=4; Pr... 107 2e-22
UniRef50_A6DAA5 Cluster: NifU family protein; n=2; Caminibacter ... 105 9e-22
UniRef50_Q3ZXT4 Cluster: NifU domain protein; n=3; Dehalococcoid... 105 1e-21
UniRef50_A4J289 Cluster: Nitrogen-fixing NifU domain protein; n=... 105 1e-21
UniRef50_Q74DA8 Cluster: NifU-like domain protein; n=2; Desulfur... 102 9e-21
UniRef50_Q7M7M7 Cluster: NIFU-LIKE PROTEIN; n=27; cellular organ... 101 1e-20
UniRef50_Q07HZ2 Cluster: Nitrogen-fixing NifU domain protein; n=... 96 7e-19
UniRef50_A1AQD6 Cluster: Nitrogen-fixing NifU domain protein; n=... 93 7e-18
UniRef50_Q3A8K8 Cluster: NifU-like protein; n=3; Desulfuromonada... 92 9e-18
UniRef50_A5D4Q3 Cluster: NifU homolog; n=1; Pelotomaculum thermo... 91 3e-17
UniRef50_A2ZW89 Cluster: Putative uncharacterized protein; n=1; ... 88 1e-16
UniRef50_Q8TGK9 Cluster: Uncharacterized protein YPL135C-A; n=2;... 88 1e-16
UniRef50_Q023P2 Cluster: Nitrogen-fixing NifU domain protein; n=... 85 2e-15
UniRef50_Q1AWB1 Cluster: TRNA (5-methylaminomethyl-2-thiouridyla... 78 2e-13
UniRef50_A7DRZ9 Cluster: SUF system FeS assembly protein, NifU f... 78 2e-13
UniRef50_Q98AM0 Cluster: Nitrogen fixation protein; NifU; n=2; M... 77 5e-13
UniRef50_A7D1I7 Cluster: SUF system FeS assembly protein, NifU f... 74 3e-12
UniRef50_A0LFU2 Cluster: Nitrogen-fixing NifU domain protein; n=... 73 6e-12
UniRef50_Q1IN98 Cluster: Nitrogen-fixing NifU-like; n=1; Acidoba... 71 2e-11
UniRef50_A5UR74 Cluster: SUF system FeS assembly protein, NifU f... 68 2e-10
UniRef50_Q7UU01 Cluster: Nitrogen fixation protein NifU; n=1; Pi... 66 7e-10
UniRef50_O32163 Cluster: NifU-like protein; n=40; Bacilli|Rep: N... 66 9e-10
UniRef50_Q83CI7 Cluster: NifU family protein; n=2; Coxiella burn... 65 2e-09
UniRef50_Q5UY39 Cluster: NifU-like protein; n=5; Halobacteriacea... 65 2e-09
UniRef50_Q8F7C7 Cluster: NifU-like protein; n=4; Leptospira|Rep:... 63 6e-09
UniRef50_Q1V2E5 Cluster: Putative nifU-like protein; n=2; Candid... 63 6e-09
UniRef50_Q2JCF1 Cluster: SUF system FeS assembly protein; n=37; ... 62 8e-09
UniRef50_Q3E456 Cluster: Nitrogen-fixing NifU-like, N-terminal; ... 62 8e-09
UniRef50_A0RXA5 Cluster: Fe-S cluster formation protein; n=1; Ce... 62 8e-09
UniRef50_A6Q4J9 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_A1SV02 Cluster: SUF system FeS assembly protein, NifU f... 61 2e-08
UniRef50_Q1JIL3 Cluster: IscU protein; n=11; Streptococcus pyoge... 60 3e-08
UniRef50_A6Q975 Cluster: Putative uncharacterized protein; n=1; ... 60 6e-08
UniRef50_Q74JG6 Cluster: NifU-like protein; n=2; Lactobacillus|R... 59 8e-08
UniRef50_Q8FF43 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_A5UR82 Cluster: Nitrogen-fixing NifU domain protein; n=... 58 1e-07
UniRef50_Q2JUE7 Cluster: SUF system FeS assembly protein, NifU f... 58 2e-07
UniRef50_Q83BY1 Cluster: NifU family protein; n=14; Bacteria|Rep... 58 2e-07
UniRef50_Q7MYK4 Cluster: Similarities with nitrogen fixation pro... 56 7e-07
UniRef50_Q97E24 Cluster: NifU homolog involved in Fe-S cluster f... 56 1e-06
UniRef50_Q62LM3 Cluster: NifU-like domain protein; n=14; Burkhol... 55 1e-06
UniRef50_A5EYF1 Cluster: SUF system FeS assembly protein, NifU f... 55 1e-06
UniRef50_A0LFS6 Cluster: Nitrogen-fixing NifU domain protein; n=... 55 1e-06
UniRef50_Q123X7 Cluster: SUF system FeS assembly protein; n=8; B... 55 2e-06
UniRef50_A0LNT2 Cluster: Nitrogen-fixing NifU domain protein; n=... 54 2e-06
UniRef50_Q8F0D6 Cluster: NifU homolog involved in Fe-S cluster f... 54 3e-06
UniRef50_Q88WY9 Cluster: NifU-like protein; n=53; Bacilli|Rep: N... 54 4e-06
UniRef50_Q1AZN5 Cluster: SUF system FeS assembly protein; n=1; R... 52 9e-06
UniRef50_Q6APN8 Cluster: Related to nitrogen fixation protein; n... 52 1e-05
UniRef50_Q01180 Cluster: Nitrogen fixation protein nifU; n=4; Rh... 52 1e-05
UniRef50_A4BSU8 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q6YQA8 Cluster: NifU homolog; n=2; Candidatus Phytoplas... 50 5e-05
UniRef50_A4M9C6 Cluster: SUF system FeS assembly protein, NifU f... 49 8e-05
UniRef50_Q82UN6 Cluster: NifU-like N terminal domain; n=5; Bacte... 49 1e-04
UniRef50_A3LER3 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q2LWF0 Cluster: NifU-like protein involved in Fe-S clus... 48 3e-04
UniRef50_UPI00001D2CFF Cluster: UPI00001D2CFF related cluster; n... 47 3e-04
UniRef50_A4EB20 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q98R36 Cluster: NITROGEN FIXATION PROTEIN NIFU; n=1; My... 47 4e-04
UniRef50_Q8EV25 Cluster: Nitrogen fixation protein NifU; n=1; My... 47 4e-04
UniRef50_Q3A7R9 Cluster: NifU-like protein; n=2; Desulfuromonada... 46 6e-04
UniRef50_Q0AAQ4 Cluster: SUF system FeS assembly protein, NifU f... 46 8e-04
UniRef50_A1IF14 Cluster: NifU protein; n=1; Candidatus Desulfoco... 46 0.001
UniRef50_Q9X192 Cluster: NifU-like protein; n=3; Thermotogaceae|... 46 0.001
UniRef50_Q9KFV2 Cluster: Nitrogen fixation protein; n=2; Bacillu... 45 0.001
UniRef50_Q14L11 Cluster: Putative iron-sulfur cluster assembly p... 45 0.001
UniRef50_Q9PQ37 Cluster: Conserved hypothetical; n=1; Ureaplasma... 45 0.002
UniRef50_Q1WR14 Cluster: IscU protein; n=1; Lactobacillus saliva... 44 0.002
UniRef50_A7CVW5 Cluster: SUF system FeS assembly protein, NifU f... 44 0.002
UniRef50_Q6YRB5 Cluster: NifU-like protein; n=2; Candidatus Phyt... 43 0.006
UniRef50_Q6KIL2 Cluster: Aminotransferase protein U homolog; n=1... 43 0.006
UniRef50_O42770 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_Q8G5Y3 Cluster: Putative uncharacterized protein; n=4; ... 41 0.029
UniRef50_O83624 Cluster: Nitrogen fixation protein; n=2; Trepone... 41 0.029
UniRef50_Q6MEW2 Cluster: Putative iron-sulfur cluster assembly p... 40 0.039
UniRef50_A1ZYV1 Cluster: SUF system FeS assembly protein, NifU f... 40 0.039
UniRef50_Q7NBI8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.051
UniRef50_Q4A687 Cluster: Nitrogen fixation protein NifU; n=2; My... 39 0.12
UniRef50_Q5K806 Cluster: Trehalose transport-related protein, pu... 38 0.27
UniRef50_Q97G09 Cluster: NifU-related domain containing protein;... 37 0.48
UniRef50_Q821N4 Cluster: NifU protein, putative; n=6; Chlamydoph... 36 0.84
UniRef50_Q1AXD4 Cluster: Nitrogen-fixing NifU-like protein; n=1;... 36 1.1
UniRef50_A7BC55 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q0FGM6 Cluster: NifU-related protein involved in Fe-S c... 35 1.9
UniRef50_UPI0000F2BF27 Cluster: PREDICTED: similar to hCG2041257... 34 3.4
UniRef50_Q73LQ8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q2JM75 Cluster: WD-repeat/protein kinase domain protein... 33 4.5
UniRef50_A6GBA1 Cluster: Adenosylmethionine--8-amino-7-oxononano... 33 4.5
UniRef50_A5IXL2 Cluster: Nitrogen fixation protein NifU; n=1; My... 33 4.5
UniRef50_Q4ZVI2 Cluster: Amino acid adenylation; n=4; Pseudomona... 33 5.9
UniRef50_Q04EW3 Cluster: Fe-S cluster formation protein, NifU-li... 33 5.9
UniRef50_Q0A8C0 Cluster: Nitrogen-fixing NifU domain protein; n=... 33 7.8
UniRef50_Q4N5X5 Cluster: Phenylalanyl-tRNA synthetase, putative;... 33 7.8
UniRef50_A0CSY9 Cluster: Chromosome undetermined scaffold_26, wh... 33 7.8
UniRef50_P47579 Cluster: Uncharacterized protein MG337; n=1; Myc... 33 7.8
>UniRef50_Q9H1K1 Cluster: Iron-sulfur cluster assembly enzyme ISCU,
mitochondrial precursor; n=320; cellular organisms|Rep:
Iron-sulfur cluster assembly enzyme ISCU, mitochondrial
precursor - Homo sapiens (Human)
Length = 167
Score = 236 bits (578), Expect = 3e-61
Identities = 112/136 (82%), Positives = 123/136 (90%), Gaps = 3/136 (2%)
Frame = +1
Query: 154 LAAP---YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVD 324
L+AP YH V+DHYENPRNVGSLDK KNVGTGLVGAPACGDVMKLQI+VDE GKIVD
Sbjct: 28 LSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVD 87
Query: 325 AKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIK 504
A+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KNTDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 88 ARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIK 147
Query: 505 AALSDYRIKQQTENKE 552
AAL+DY++KQ+ + E
Sbjct: 148 AALADYKLKQEPKKGE 163
>UniRef50_Q6CFQ0 Cluster: Iron sulfur cluster assembly protein 1,
mitochondrial precursor; n=5; Ascomycota|Rep: Iron
sulfur cluster assembly protein 1, mitochondrial
precursor - Yarrowia lipolytica (Candida lipolytica)
Length = 181
Score = 208 bits (509), Expect = 7e-53
Identities = 98/136 (72%), Positives = 115/136 (84%)
Frame = +1
Query: 139 SPNVILAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKI 318
+P I YH V+DHY NPRNVGS++K D++VGTGLVGAPACGDVMKLQI+VD+NG I
Sbjct: 28 TPLAISRRGYHEKVLDHYNNPRNVGSMNKNDEDVGTGLVGAPACGDVMKLQIRVDDNGVI 87
Query: 319 VDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDA 498
D KFKTFGCGSAIASSS TE V+GK++ EA K+KNT IAKELSLPPVKLHCSMLAEDA
Sbjct: 88 QDVKFKTFGCGSAIASSSYVTELVRGKSLAEAGKIKNTVIAKELSLPPVKLHCSMLAEDA 147
Query: 499 IKAALSDYRIKQQTEN 546
IK+A+SDY K++T+N
Sbjct: 148 IKSAISDYNSKRKTKN 163
>UniRef50_Q9UTC6 Cluster: Iron sulfur cluster assembly protein 1,
mitochondrial precursor; n=6; Dikarya|Rep: Iron sulfur
cluster assembly protein 1, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 191 bits (466), Expect = 1e-47
Identities = 90/125 (72%), Positives = 103/125 (82%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
YH NV+DHY NPRNVG+L K D +VG GLVGAPACGDVM+L I+V+++G I D KFKTFG
Sbjct: 54 YHKNVLDHYNNPRNVGTLPKGDPDVGIGLVGAPACGDVMRLAIRVNKDGVIEDVKFKTFG 113
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYR 525
CGSAIASSS T VKG T++EA K+KNT IAKEL LPPVKLHCSMLAEDAIK+A+ YR
Sbjct: 114 CGSAIASSSYVTTMVKGMTLEEASKIKNTQIAKELCLPPVKLHCSMLAEDAIKSAVKHYR 173
Query: 526 IKQQT 540
KQ T
Sbjct: 174 SKQLT 178
>UniRef50_A2QHV4 Cluster: Remark: alternate names for S. cerevisiae
Isu2: Nua2; n=8; cellular organisms|Rep: Remark:
alternate names for S. cerevisiae Isu2: Nua2 -
Aspergillus niger
Length = 198
Score = 190 bits (464), Expect = 2e-47
Identities = 92/123 (74%), Positives = 104/123 (84%), Gaps = 1/123 (0%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVD-ENGKIVDAKFKTF 342
YH V+DHY NPRNVGS+ K +VGTGLVGAPACGDVMKLQI+VD ++ KI D KFKTF
Sbjct: 46 YHEKVLDHYSNPRNVGSM-AKSMDVGTGLVGAPACGDVMKLQIRVDKDSNKISDVKFKTF 104
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDY 522
GCGSAIASSS TE V+G T+DEA K++NTDIAKEL LPPVKLHCSMLAEDAIK+A+SDY
Sbjct: 105 GCGSAIASSSYLTELVRGMTLDEAAKIRNTDIAKELCLPPVKLHCSMLAEDAIKSAISDY 164
Query: 523 RIK 531
K
Sbjct: 165 YTK 167
>UniRef50_UPI0000E4A7B0 Cluster: PREDICTED: similar to NifU-like
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to NifU-like protein -
Strongylocentrotus purpuratus
Length = 163
Score = 180 bits (438), Expect = 3e-44
Identities = 86/130 (66%), Positives = 102/130 (78%), Gaps = 1/130 (0%)
Frame = +1
Query: 157 AAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKV-DENGKIVDAKF 333
+A YH NVIDHYENPRNVG++DK DKNVGTGLVGAPACGDVMKLQ+++ D+ I +
Sbjct: 29 SASYHKNVIDHYENPRNVGAMDKNDKNVGTGLVGAPACGDVMKLQVQISDKKHGIDNVAI 88
Query: 334 KTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAAL 513
GC S +++S T +G VDEA +KNTDIAKELSLPPVKLHCSMLAEDAIKAAL
Sbjct: 89 SDVGCCSLMSTSMEYTNLCRGMHVDEAKDIKNTDIAKELSLPPVKLHCSMLAEDAIKAAL 148
Query: 514 SDYRIKQQTE 543
DYR+KQ ++
Sbjct: 149 QDYRVKQDSK 158
>UniRef50_Q7QTV3 Cluster: GLP_76_35055_35693; n=4; Eukaryota|Rep:
GLP_76_35055_35693 - Giardia lamblia ATCC 50803
Length = 212
Score = 171 bits (417), Expect = 9e-42
Identities = 77/123 (62%), Positives = 102/123 (82%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y + HY P N+G+LD D++VG+GLVGAPACGDVM+LQIKV ++GKI +AKFKTFG
Sbjct: 80 YSELAMQHYRTPVNIGTLDDDDEHVGSGLVGAPACGDVMRLQIKVGDDGKISEAKFKTFG 139
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYR 525
CG+AIASSS AT ++GK+++EA ++KNTDI+ +L LPPVKLHCS+LAEDAI+ A+ DY+
Sbjct: 140 CGAAIASSSYATSLLQGKSLEEASQIKNTDISDKLGLPPVKLHCSVLAEDAIRQAIDDYK 199
Query: 526 IKQ 534
K+
Sbjct: 200 RKR 202
>UniRef50_Q4WNS3 Cluster: Iron-sulfur cofactor synthesis protein
(Isu1), putative; n=2; Eurotiomycetidae|Rep: Iron-sulfur
cofactor synthesis protein (Isu1), putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 255
Score = 165 bits (401), Expect(2) = 1e-40
Identities = 81/109 (74%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
Frame = +1
Query: 208 VGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDEN-GKIVDAKFKTFGCGSAIASSSLATE 384
VGSL K +VG GLVGAPACGDVMKLQI+VD++ KI D KFKTFGCGSAIASSS TE
Sbjct: 118 VGSLPKDAPDVGLGLVGAPACGDVMKLQIRVDKDTSKITDVKFKTFGCGSAIASSSYLTE 177
Query: 385 WVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIK 531
V+G T+DEA K++NTDIAKEL LPPVKLHCSMLAEDAIK+A++DY K
Sbjct: 178 LVRGMTLDEAAKIRNTDIAKELCLPPVKLHCSMLAEDAIKSAINDYYTK 226
Score = 24.2 bits (50), Expect(2) = 1e-40
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDK 225
++DHY NPRN D+
Sbjct: 67 LLDHYNNPRNEDCYDQ 82
>UniRef50_Q4N9C2 Cluster: NifU protein, putative; n=11; cellular
organisms|Rep: NifU protein, putative - Theileria parva
Length = 301
Score = 167 bits (406), Expect = 2e-40
Identities = 78/119 (65%), Positives = 95/119 (79%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y V DH+ NPRNVGS DK D +VGT +VG ACGDV+KLQ+K+ + I DA FKTFG
Sbjct: 178 YSPEVKDHFNNPRNVGSFDKDDPSVGTAIVGKAACGDVIKLQVKIKDQ-VIEDACFKTFG 236
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDY 522
CGSAIASSS TE VKGKT +EAL +KNTDI+ +L+LPPVK+HCS+LAEDA+K A++DY
Sbjct: 237 CGSAIASSSYVTEMVKGKTCEEALAIKNTDISDKLNLPPVKIHCSLLAEDAVKHAINDY 295
>UniRef50_Q6E0I7 Cluster: Iron-sulfur cluster assembly protein; n=1;
Toxoplasma gondii|Rep: Iron-sulfur cluster assembly
protein - Toxoplasma gondii
Length = 219
Score = 165 bits (401), Expect = 8e-40
Identities = 81/129 (62%), Positives = 101/129 (78%), Gaps = 4/129 (3%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKD----KNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKF 333
Y V +H+ NP+N G+ D D VGT +VG ACGDV+KLQ+ V E+GKI DA+F
Sbjct: 66 YSKKVHEHFFNPKNAGAFDLSDPETRSKVGTAVVGKAACGDVIKLQVLV-EDGKIRDARF 124
Query: 334 KTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAAL 513
KTFGCGSAIASSS ATE +KGKT D+ALKLKNTDIA+ L+LPPVK+HCS+LAEDA++ A+
Sbjct: 125 KTFGCGSAIASSSYATELIKGKTCDDALKLKNTDIAEYLNLPPVKVHCSLLAEDAVRHAI 184
Query: 514 SDYRIKQQT 540
DY+ KQ+T
Sbjct: 185 LDYQKKQKT 193
>UniRef50_Q0CL81 Cluster: Iron sulfur cluster assembly protein 1,
mitochondrial; n=1; Aspergillus terreus NIH2624|Rep:
Iron sulfur cluster assembly protein 1, mitochondrial -
Aspergillus terreus (strain NIH 2624)
Length = 179
Score = 163 bits (395), Expect = 4e-39
Identities = 86/145 (59%), Positives = 102/145 (70%), Gaps = 21/145 (14%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDE----------------- 306
++DHY NPRNVGS+++KD +VG+GLVGAPACGDVMKLQI+VD+
Sbjct: 7 LLDHYNNPRNVGSMNRKDLDVGSGLVGAPACGDVMKLQIRVDKDTNTISGTPPPSIIDIM 66
Query: 307 ----NGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLH 474
N +D KFKTFGCGSAIASSS TE V+G T++EA K+ N IAKEL LPPVKLH
Sbjct: 67 DDPANMLTIDVKFKTFGCGSAIASSSYLTELVRGMTLEEAGKVTNVAIAKELCLPPVKLH 126
Query: 475 CSMLAEDAIKAALSDYRIKQQTENK 549
CSMLAEDAIK+A+SDY K K
Sbjct: 127 CSMLAEDAIKSAISDYYTKNPQARK 151
>UniRef50_Q38DM2 Cluster: Iron-sulfur cluster assembly protein,
putative; n=2; Trypanosoma|Rep: Iron-sulfur cluster
assembly protein, putative - Trypanosoma brucei
Length = 180
Score = 159 bits (387), Expect = 4e-38
Identities = 76/127 (59%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
Frame = +1
Query: 154 LAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIV-DAK 330
L + Y V +HY NPRNVG LDK D NVGTGL GAP CGD+ ++Q+KV+ ++ D K
Sbjct: 18 LRSLYSPLVEEHYNNPRNVGKLDKSDPNVGTGLRGAPECGDMTQMQVKVNPETMVIEDVK 77
Query: 331 FKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAA 510
FK FGCGSAIA+SS A++ ++GKT+ EAL+L N IA+ELSLPPVKLHCSMLAE+ I+AA
Sbjct: 78 FKAFGCGSAIAASSYASQAIRGKTLAEALQLTNKRIARELSLPPVKLHCSMLAEETIQAA 137
Query: 511 LSDYRIK 531
+ +Y K
Sbjct: 138 VENYLSK 144
>UniRef50_Q896F6 Cluster: NifU protein; n=7; cellular organisms|Rep:
NifU protein - Clostridium tetani
Length = 158
Score = 147 bits (356), Expect = 2e-34
Identities = 73/126 (57%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = +1
Query: 151 ILAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAK 330
I+ PY V++H+ NPRNVG + D N G G VG P CGD+MK+ +KV++N I D K
Sbjct: 14 IIMMPYSDKVMEHFRNPRNVGEIS--DAN-GVGEVGNPKCGDIMKIYLKVEDN-IIKDVK 69
Query: 331 FKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKA 507
FKTFGCGSAIASSS+ATE +KGKT++EA +L N +A L LPPVK+HCS+LAE+AI
Sbjct: 70 FKTFGCGSAIASSSMATELIKGKTLEEAWELSNKAVADALDGLPPVKMHCSVLAEEAIHK 129
Query: 508 ALSDYR 525
A++DYR
Sbjct: 130 AINDYR 135
>UniRef50_Q8TME1 Cluster: NifU protein; n=24; cellular
organisms|Rep: NifU protein - Methanosarcina acetivorans
Length = 128
Score = 140 bits (338), Expect = 3e-32
Identities = 70/127 (55%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y A V+DH+ NPRN+GS+ D G G VG CGD+MK+ +KV E +IVD KF+TFG
Sbjct: 3 YSAKVLDHFSNPRNMGSIANCD---GVGEVGNAKCGDIMKIFLKV-EGDRIVDVKFQTFG 58
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDY 522
CG+AIASSS+ATE +KGK + EA +L N +A+ L LPP+K+HCSMLAE+AI A++DY
Sbjct: 59 CGAAIASSSMATELIKGKILKEAWELSNKAVAEALDGLPPIKMHCSMLAEEAIHEAINDY 118
Query: 523 RIKQQTE 543
K+ E
Sbjct: 119 LQKKGLE 125
>UniRef50_O34393 Cluster: NifU protein; n=24; cellular
organisms|Rep: NifU protein - Archaeoglobus fulgidus
Length = 153
Score = 130 bits (313), Expect = 4e-29
Identities = 63/120 (52%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y V DH++NPRNVG ++ D G G VG P CGD+M + IKV +N +I D KF+TFG
Sbjct: 2 YSDKVFDHFQNPRNVGKIEDAD---GVGTVGNPVCGDLMTIYIKVKDN-RIEDIKFQTFG 57
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDY 522
C +AIA+SS+ATE KGKT++EALK+ +A+ L LP K+HCS LA DA++ A+ DY
Sbjct: 58 CAAAIATSSMATEMAKGKTIEEALKITRDAVAEALGGLPKQKMHCSNLAADALRRAIVDY 117
>UniRef50_A4LX66 Cluster: Fe-S cluster assembly protein NifU; n=20;
cellular organisms|Rep: Fe-S cluster assembly protein
NifU - Geobacter bemidjiensis Bem
Length = 284
Score = 127 bits (306), Expect = 3e-28
Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENG-KIVDAKFKTF 342
Y V +H+ NPRNVG + D G VG+ ACGD +KL IK+DE +IVDA+F+TF
Sbjct: 4 YTDKVKEHFLNPRNVGEITDAD---AVGEVGSLACGDALKLFIKLDEKKERIVDARFQTF 60
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSD 519
GCGSAIASSS TE VKGKT+DEAL++ N +IA L LP K+HCS++ ++A++ A++
Sbjct: 61 GCGSAIASSSALTEMVKGKTLDEALQISNQEIADFLGGLPEEKMHCSVMGQEALEVAIAK 120
Query: 520 YR 525
YR
Sbjct: 121 YR 122
>UniRef50_O67045 Cluster: NifU-like protein; n=4; cellular
organisms|Rep: NifU-like protein - Aquifex aeolicus
Length = 157
Score = 125 bits (301), Expect = 1e-27
Identities = 67/125 (53%), Positives = 82/125 (65%), Gaps = 2/125 (1%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVD-ENGKIVDAKFKTF 342
Y+ V+DH+ NPRNVG L+ D N G G G PACGD M IKV+ EN I D +FKTF
Sbjct: 5 YNEKVLDHFLNPRNVGVLE--DAN-GVGQCGNPACGDAMLFTIKVNPENDVIEDVRFKTF 61
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSD 519
GCGSAIA SS+ TE VKGK + AL L DI +EL LPP K+HC+ L + + A+ D
Sbjct: 62 GCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEELGGLPPQKIHCTNLGLETLHVAIKD 121
Query: 520 YRIKQ 534
Y +KQ
Sbjct: 122 YLMKQ 126
>UniRef50_Q4UGE0 Cluster: RNaseP-like protein with Nifu domain,
putative; n=1; Theileria annulata|Rep: RNaseP-like
protein with Nifu domain, putative - Theileria annulata
Length = 261
Score = 124 bits (300), Expect = 1e-27
Identities = 62/102 (60%), Positives = 72/102 (70%)
Frame = +1
Query: 136 GSPNVILAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGK 315
G + L Y V DH+ NPRNVGS DK D +VGT +VG ACGDV+KLQ+K+ +
Sbjct: 144 GINRINLVRRYSPEVNDHFNNPRNVGSFDKDDPSVGTAIVGKAACGDVIKLQVKIKDE-V 202
Query: 316 IVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 441
I DA FKTFGCGSAIASSS TE VKGKT EAL +KNTDI+
Sbjct: 203 IEDACFKTFGCGSAIASSSYVTEMVKGKTCKEALAIKNTDIS 244
>UniRef50_P05340 Cluster: Nitrogen fixation protein nifU; n=17;
Bacteria|Rep: Nitrogen fixation protein nifU -
Azotobacter vinelandii
Length = 312
Score = 123 bits (297), Expect = 3e-27
Identities = 62/122 (50%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVD-ENGKIVDAKFKTF 342
Y V +H+ NP+N G+++ + G VG+ +CGD ++L +KVD E I+DA F+TF
Sbjct: 4 YSEKVKEHFYNPKNAGAVEGAN---AIGDVGSLSCGDALRLTLKVDPETDVILDAGFQTF 60
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSD 519
GCGSAIASSS TE VKG T+DEALK+ N DIA L LPP K+HCS++ +A++AA+++
Sbjct: 61 GCGSAIASSSALTEMVKGLTLDEALKISNQDIADYLDGLPPEKMHCSVMGREALQAAVAN 120
Query: 520 YR 525
YR
Sbjct: 121 YR 122
>UniRef50_Q8TSI9 Cluster: NifU family protein; n=5;
Methanomicrobia|Rep: NifU family protein -
Methanosarcina acetivorans
Length = 220
Score = 122 bits (294), Expect = 7e-27
Identities = 57/125 (45%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
Frame = +1
Query: 163 PYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIV-DAKFKT 339
PY V++H+ NP NVG ++ D G GL G+PACGD++ + IKV+ K++ D KF++
Sbjct: 13 PYSEKVLEHFRNPHNVGKIENAD---GKGLEGSPACGDMVAVYIKVEPETKVIEDVKFES 69
Query: 340 FGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALS 516
+GC S IA+ S+ T+ KGKT+DEA K+ ++EL LPP+K HCS+LA + ++AA+
Sbjct: 70 YGCASNIATGSVITDLAKGKTLDEAKKITWKQASEELGGLPPIKAHCSVLAVEGLRAAIR 129
Query: 517 DYRIK 531
DY K
Sbjct: 130 DYEEK 134
>UniRef50_P20628 Cluster: Nitrogen fixation protein nifU; n=24;
Bacteria|Rep: Nitrogen fixation protein nifU - Anabaena
sp. (strain PCC 7120)
Length = 300
Score = 121 bits (292), Expect = 1e-26
Identities = 61/125 (48%), Positives = 90/125 (72%), Gaps = 5/125 (4%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDK---NVGTGLVGAPACGDVMKLQIKVD-ENGKIVDAKF 333
Y V++ + +P+N G +++ + V TG VG+ ACGD ++L IKV+ E+ KIVD++F
Sbjct: 4 YTDKVLELFYDPKNQGVIEENGEPGVKVATGEVGSIACGDALRLHIKVEVESDKIVDSRF 63
Query: 334 KTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAA 510
+TFGC SAIASSS TE +KG T+DEALK+ N DIA L LP K+HCS++ ++A++AA
Sbjct: 64 QTFGCTSAIASSSALTEMIKGLTLDEALKVSNKDIADYLGGLPEAKMHCSVMGQEALEAA 123
Query: 511 LSDYR 525
+ +YR
Sbjct: 124 IYNYR 128
>UniRef50_Q2LWE9 Cluster: NifU-like protein involved in Fe-S cluster
formation with 2Fe-2S domain; n=1; Syntrophus
aciditrophicus SB|Rep: NifU-like protein involved in
Fe-S cluster formation with 2Fe-2S domain - Syntrophus
aciditrophicus (strain SB)
Length = 229
Score = 120 bits (289), Expect = 3e-26
Identities = 59/121 (48%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y V +H+ NPRNVG ++ D G G VG+ ACGD ++L K+DEN +I +AKFK+FG
Sbjct: 4 YTDKVREHFWNPRNVGEVENPD---GIGQVGSLACGDALRLTFKLDENKRIKEAKFKSFG 60
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDY 522
C SAIA++S+ TE V G T+++A K+ N DIA L LP K+HCS+L E ++ A++ Y
Sbjct: 61 CASAIAAASVLTEMVVGLTIEQAEKITNQDIAAALGGLPEQKMHCSVLGEQVLEKAIACY 120
Query: 523 R 525
R
Sbjct: 121 R 121
>UniRef50_Q2RIL0 Cluster: Nitrogen-fixing NifU-like; n=3;
Clostridia|Rep: Nitrogen-fixing NifU-like - Moorella
thermoacetica (strain ATCC 39073)
Length = 139
Score = 116 bits (278), Expect = 6e-25
Identities = 56/126 (44%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSA 357
VIDH+ NPRNVG ++ D G G +G P CGD + + IKV +N ++VD KF+ GC +A
Sbjct: 6 VIDHFLNPRNVGRIEDAD---GIGAIGDPGCGDYLCIYIKVRDN-RLVDVKFQVHGCPAA 61
Query: 358 IASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIKQ 534
IA+SS+ TE +GKT++E L++ + D+A + LP VKLHCS L A+ A+ +Y+ K
Sbjct: 62 IATSSILTEMARGKTLEEGLRITDADVAAAIGGLPEVKLHCSNLGASALHDAIRNYQAKM 121
Query: 535 QTENKE 552
Q ++
Sbjct: 122 QAGGQQ 127
>UniRef50_Q8KB04 Cluster: IscU protein; n=10; Chlorobiaceae|Rep:
IscU protein - Chlorobium tepidum
Length = 203
Score = 111 bits (266), Expect = 2e-23
Identities = 55/124 (44%), Positives = 83/124 (66%), Gaps = 2/124 (1%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVD-ENGKIVDAKFKTF 342
Y + +H+E+P+NV + G G+ G CGD M + IKVD E+ KI D ++KT+
Sbjct: 9 YTEKLKEHFESPKNVLQGNDTSAFDGVGMEGNLQCGDQMMVAIKVDKESEKITDCQWKTY 68
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSD 519
GC SAIAS+S+ +E VKG T+D+A + ++AKEL LP K+HCS+L + A++AA++D
Sbjct: 69 GCASAIASTSILSEMVKGMTLDQAFNISPKEVAKELGGLPENKIHCSVLGDKALRAAIND 128
Query: 520 YRIK 531
Y I+
Sbjct: 129 YFIR 132
>UniRef50_P05343 Cluster: Nitrogen fixation protein nifU; n=4;
Proteobacteria|Rep: Nitrogen fixation protein nifU -
Klebsiella pneumoniae
Length = 274
Score = 107 bits (257), Expect = 2e-22
Identities = 54/122 (44%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVD-AKFKTF 342
Y V DH+ NPRN +D + G VG+ +CGD ++L ++VD +I++ A F+TF
Sbjct: 4 YSEKVKDHFFNPRNARVVDNAN---AVGDVGSLSCGDALRLMLRVDPQSEIIEEAGFQTF 60
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSD 519
GCGSAIASSS TE + G T+ EA ++ N IA L LPP K+HCS++ ++A++AA+++
Sbjct: 61 GCGSAIASSSALTELIIGHTLAEAGQITNQQIADYLDGLPPEKMHCSVMGQEALRAAIAN 120
Query: 520 YR 525
+R
Sbjct: 121 FR 122
>UniRef50_A6DAA5 Cluster: NifU family protein; n=2; Caminibacter
mediatlanticus TB-2|Rep: NifU family protein -
Caminibacter mediatlanticus TB-2
Length = 321
Score = 105 bits (252), Expect = 9e-22
Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 13/142 (9%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKD-KNVGTGLV----GAPACGDVMKLQIKVD-ENGKIVDA 327
Y V++ NP+ +G ++D K LV G+ ACGD ++L VD + KI+DA
Sbjct: 15 YSNKVVERMNNPKFLGEFSEEDAKKRDAKLVVADFGSEACGDAVRLYWLVDPKTDKIIDA 74
Query: 328 KFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-------SLPPVKLHCSML 486
+FK+FGCG+AIASS + TE GKTVDEA+K+ N D+ K L + PP K+HCS++
Sbjct: 75 RFKSFGCGTAIASSDVMTELTIGKTVDEAMKVTNLDVEKALRDEPNKPAFPPQKMHCSVM 134
Query: 487 AEDAIKAALSDYRIKQQTENKE 552
A D I A + Y+ K E K+
Sbjct: 135 AYDVIMEAAAKYKGKDAEELKD 156
>UniRef50_Q3ZXT4 Cluster: NifU domain protein; n=3;
Dehalococcoides|Rep: NifU domain protein -
Dehalococcoides sp. (strain CBDB1)
Length = 127
Score = 105 bits (251), Expect = 1e-21
Identities = 50/125 (40%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y V++++ NP N G ++ D G G G CGDV + I+V +N ++V+ KFKT+G
Sbjct: 4 YFEKVMEYFVNPLNSGEMENPD---GIGRAGNAVCGDVTEFYIRVKDN-RLVEVKFKTYG 59
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDY 522
CG+A+A SSL + GKT++EA+K+ N + E+ LP + HCS + A+ +A++DY
Sbjct: 60 CGAAVAISSLVSLMATGKTIEEAMKIDNKAVEAEIKGLPQNRNHCSQMGPQALHSAIADY 119
Query: 523 RIKQQ 537
+IK Q
Sbjct: 120 KIKVQ 124
>UniRef50_A4J289 Cluster: Nitrogen-fixing NifU domain protein; n=2;
Clostridiales|Rep: Nitrogen-fixing NifU domain protein -
Desulfotomaculum reducens MI-1
Length = 163
Score = 105 bits (251), Expect = 1e-21
Identities = 58/132 (43%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Frame = +1
Query: 157 AAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFK 336
A Y +DH+ NPRNVG ++ + G G +G CGDV ++ I V+E +I D KF+
Sbjct: 12 ALAYSEKTLDHFRNPRNVGVVENYN---GRGKIGEADCGDVCEITILVEEE-QINDIKFR 67
Query: 337 TFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAAL 513
+GC A+A+SS TE KGK +EALKL + D+ + L LP K HCS+L A+K A+
Sbjct: 68 VYGCVGAVATSSAVTELAKGKHCEEALKLTDDDVVEFLDGLPDQKKHCSLLGIRALKQAI 127
Query: 514 SDYRI-KQQTEN 546
DY + KQ EN
Sbjct: 128 YDYWLYKQLLEN 139
>UniRef50_Q74DA8 Cluster: NifU-like domain protein; n=2;
Desulfuromonadales|Rep: NifU-like domain protein -
Geobacter sulfurreducens
Length = 131
Score = 102 bits (244), Expect = 9e-21
Identities = 60/133 (45%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Frame = +1
Query: 154 LAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKF 333
+A Y A V DH NPRNVGSL+ D NV G P CGD + ++++E+ + D KF
Sbjct: 1 MAEIYSAKVWDHVRNPRNVGSLE--DANVVVQ-AGDPTCGDAVLYFLRIEED-IVRDIKF 56
Query: 334 KTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAA 510
GCG+AIA+SS+ATE V GK +DE + L + IA+ L LP K+HCS +A A+ AA
Sbjct: 57 LIKGCGAAIATSSVATELVMGKGLDEVMGLSDQIIAQALDGLPEEKMHCSNMAASALHAA 116
Query: 511 LSDYRIKQQTENK 549
+ YR E K
Sbjct: 117 VEQYRATVAGETK 129
>UniRef50_Q7M7M7 Cluster: NIFU-LIKE PROTEIN; n=27; cellular
organisms|Rep: NIFU-LIKE PROTEIN - Wolinella
succinogenes
Length = 327
Score = 101 bits (242), Expect = 1e-20
Identities = 56/133 (42%), Positives = 83/133 (62%), Gaps = 13/133 (9%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNV-GTGLV----GAPACGDVMKLQIKVD-ENGKIVDA 327
Y V +NP+ +G+L ++D + G L+ GA +CGD ++L +D + +I+DA
Sbjct: 15 YSNKVAARMDNPKYLGTLSQEDADAKGAKLIIADYGAESCGDAVRLYWLIDPKTDRIIDA 74
Query: 328 KFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-------SLPPVKLHCSML 486
KFK+FGCG+AIASS + E GKTVDEA+K+ N D+ K L ++P K+HCS++
Sbjct: 75 KFKSFGCGTAIASSDMMVELCLGKTVDEAIKITNIDVEKALRDDPETPAVPGQKMHCSVM 134
Query: 487 AEDAIKAALSDYR 525
A D IK A S Y+
Sbjct: 135 AYDVIKKAASLYK 147
>UniRef50_Q07HZ2 Cluster: Nitrogen-fixing NifU domain protein; n=6;
Rhizobiales|Rep: Nitrogen-fixing NifU domain protein -
Rhodopseudomonas palustris (strain BisA53)
Length = 339
Score = 95.9 bits (228), Expect = 7e-19
Identities = 48/124 (38%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
Frame = +1
Query: 184 DHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDE-NGKIVDAKFKTFGCGSAI 360
+H+ NP+NVG L + + G VGA GD +KL +++D +I A+F+T+GC SAI
Sbjct: 13 EHFANPKNVGVLAEAN---AVGSVGALDYGDAVKLMLRIDPATDRIEQARFQTYGCSSAI 69
Query: 361 ASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIKQQ 537
A+SS TE + GK++DEAL++ D+A+ L LP +++CS++ +A++ A++ YR ++
Sbjct: 70 AASSAITEMIIGKSIDEALEISAADVAEFLGGLPDERMYCSVMTYEAVQKAIAAYRHPEE 129
Query: 538 TENK 549
K
Sbjct: 130 AAIK 133
>UniRef50_A1AQD6 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Pelobacter propionicus DSM 2379|Rep: Nitrogen-fixing
NifU domain protein - Pelobacter propionicus (strain DSM
2379)
Length = 133
Score = 92.7 bits (220), Expect = 7e-18
Identities = 51/127 (40%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Frame = +1
Query: 160 APYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKT 339
A Y V DH+ PRN G L+ D N G G +G P CGD +K+ +K++++ + D KF+
Sbjct: 4 AHYSPKVFDHFLTPRNNGVLE--DAN-GIGEIGDPECGDHLKVYVKIEDD-IVKDIKFQI 59
Query: 340 FGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALS 516
GC +AIA +S TE V GK V EA+ + + I + + LP K+HCS L + A+
Sbjct: 60 KGCPAAIACASAMTELVMGKPVGEAMLVSDDQIIEYIDGLPEFKVHCSALGASGFRVAVM 119
Query: 517 DYRIKQQ 537
DY IK +
Sbjct: 120 DYSIKSK 126
>UniRef50_Q3A8K8 Cluster: NifU-like protein; n=3;
Desulfuromonadales|Rep: NifU-like protein - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 143
Score = 92.3 bits (219), Expect = 9e-18
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y V++H+ PRNVG +D + G P CGD + + + ++E+ I D K+K G
Sbjct: 2 YSKQVMEHFTRPRNVGYIDNPSVAIQ---YGDPTCGDCLLVFLLIEED-VIRDMKYKVLG 57
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDY 522
C +AIA++S+ +E G+T+++A++L ++A L LPP K+HCS LA A+KAAL Y
Sbjct: 58 CAAAIATASITSEMAIGRTLEQAMELTEKEVAVALGGLPPQKMHCSNLAVGALKAALRVY 117
>UniRef50_A5D4Q3 Cluster: NifU homolog; n=1; Pelotomaculum
thermopropionicum SI|Rep: NifU homolog - Pelotomaculum
thermopropionicum SI
Length = 150
Score = 90.6 bits (215), Expect = 3e-17
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDK-NVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTF 342
Y VIDH NPRNVG++ D + TG CGD M + +KV +N KI +A F T
Sbjct: 17 YSDTVIDHARNPRNVGNIPNCDGFSQETG-----ECGDTMAIWLKVIDN-KINNATFWTD 70
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSD 519
GCG+ IA S+ TE K +V+EALK+K DI L LP HC+ LA +A++ A+ D
Sbjct: 71 GCGTTIACGSMVTEMAKNLSVEEALKIKAEDILNALGGLPEDHAHCAALAAEALRNAVKD 130
Query: 520 Y 522
Y
Sbjct: 131 Y 131
>UniRef50_A2ZW89 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 156
Score = 88.2 bits (209), Expect = 1e-16
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +1
Query: 376 ATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQ 534
ATEWVKGK ++E + +KNT+IAK LSLPPVKLHCSMLAEDAIKAA+ DY K+
Sbjct: 90 ATEWVKGKQMEEVVTIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKK 142
>UniRef50_Q8TGK9 Cluster: Uncharacterized protein YPL135C-A; n=2;
Saccharomycetaceae|Rep: Uncharacterized protein
YPL135C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 57
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Frame = -2
Query: 359 IAEPHPKVLNLASTIFPFSS-TLICNFITSPHAGAPTRPVPTFLSFLSNEPTLRG 198
+AEPHPKVLNL S+I P S TLICN ITSPHAGAPTRPVPT +FLSNEPT G
Sbjct: 1 MAEPHPKVLNLTSSITPVESLTLICNLITSPHAGAPTRPVPTLGNFLSNEPTFLG 55
>UniRef50_Q023P2 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Solibacter usitatus Ellin6076|Rep: Nitrogen-fixing NifU
domain protein - Solibacter usitatus (strain Ellin6076)
Length = 118
Score = 84.6 bits (200), Expect = 2e-15
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y ++DH++NPRNVG L V V PACGD+++L E G+I +A +K G
Sbjct: 2 YPERLLDHFQNPRNVGELPSPAITVE---VSNPACGDILRLSALFTE-GRIAEASYKVRG 57
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKA 507
C ++IA+ S TEW+ GKT DE + T I + + LP H ++L D +KA
Sbjct: 58 CTASIAAGSALTEWLAGKTRDELSRFTATLIDEAVGGLPTASKHAAVLCADGVKA 112
>UniRef50_Q1AWB1 Cluster: TRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase;
n=2; Bacteria|Rep: TRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
- Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129)
Length = 488
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y VI+H NPRN G + G G G ACGD ++ ++V + ++ + +++ +G
Sbjct: 5 YGPRVIEHLVNPRNAGEVGGPS---GVGEAGNAACGDQVRFTLRVGGDLRLQEVRYRAYG 61
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELS--LPPVKLHCSMLAEDAIKAALSD 519
C + IA+ S E +G+++ A ++ DI + L LPP K H + LA DA+ A D
Sbjct: 62 CAACIAAGSALAELAEGRSITGAAQISRGDIQEALGGPLPPGKEHGATLALDALHRAFED 121
Query: 520 YRIKQ 534
Y +Q
Sbjct: 122 YWSRQ 126
>UniRef50_A7DRZ9 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: SUF system FeS assembly protein, NifU family -
Candidatus Nitrosopumilus maritimus SCM1
Length = 147
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
YH ++D+ NP N G ++ D P CGD + + +K+D++ K+ D KF G
Sbjct: 8 YHEMIVDYSRNPVNYGEIEDHDVTFHDA---NPLCGDSIDIDMKIDDD-KVTDIKFHGKG 63
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELS---LPPVKLHCSMLAEDAIKAALS 516
C +A SS+ TE KGK++++ ++ D+ EL L V++ C++L+ +K+AL
Sbjct: 64 CAICMACSSVLTEITKGKSLEDVKNIEKNDVLSELGLEHLQAVRIKCALLSLKVLKSALY 123
Query: 517 DYRIKQQTENKE 552
Y K +++
Sbjct: 124 TYLAKHLESSED 135
>UniRef50_Q98AM0 Cluster: Nitrogen fixation protein; NifU; n=2;
Mesorhizobium loti|Rep: Nitrogen fixation protein; NifU
- Rhizobium loti (Mesorhizobium loti)
Length = 153
Score = 76.6 bits (180), Expect = 5e-13
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Frame = +1
Query: 187 HYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGK-IVDAKFKTFGCGSAIA 363
++ NP NVG LD + G VGA ACGD +KL + D + I A F+TFG GSAI
Sbjct: 16 YFINPHNVGVLDIPN---AAGEVGAVACGDGLKLMMGFDPKTETITAATFQTFGRGSAIT 72
Query: 364 SSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSM 483
+SS T+++ GKT+DEAL++ + ++A L +LPP ++ S+
Sbjct: 73 ASSTITQFIVGKTIDEALQITDQEMADFLGALPPHTIYSSL 113
>UniRef50_A7D1I7 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Halorubrum lacusprofundi ATCC 49239|Rep:
SUF system FeS assembly protein, NifU family -
Halorubrum lacusprofundi ATCC 49239
Length = 172
Score = 74.1 bits (174), Expect = 3e-12
Identities = 42/137 (30%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKD-KNVGTGLVGAPACGDVMKLQIKVDENGKIVDA-KFKT 339
Y ++DHY+NPRN G L+ D +VG P+CGD +++Q+ +D+ G+ + A +F
Sbjct: 40 YRQQILDHYKNPRNYGELEDPDFTHVGEN----PSCGDTIQMQVALDDAGETIKAVRFTG 95
Query: 340 FGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL--SLPPVKLHCSML----AEDAI 501
GC ++AS+S+ +E + G +++E L DI + L + P+++ C++L A+D
Sbjct: 96 DGCAISMASASMLSERLHGMSIEELDALDTDDITEMLGVDISPMRVKCAVLGRQVAQDGS 155
Query: 502 KAALSDYRIKQQTENKE 552
K + +T+ +E
Sbjct: 156 KIHRDELDPDDRTKTEE 172
>UniRef50_A0LFU2 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nitrogen-fixing
NifU domain protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 144
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 268 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 447
CGD M + +KV ++G I D K++ GC A+AS+ A E +KGKT++EA L + DI +
Sbjct: 55 CGDTMSVCLKV-QDGVIRDLKYQVLGCPGAVASAMAAVELIKGKTIEEARSLNDGDIFRL 113
Query: 448 L-SLPPVKLHCSMLAEDAIKAALSDYRIK 531
L +P K HC LA +K AL +Y K
Sbjct: 114 LEEIPAQKHHCIQLAVKTLKKALDEYARK 142
>UniRef50_Q1IN98 Cluster: Nitrogen-fixing NifU-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Nitrogen-fixing
NifU-like - Acidobacteria bacterium (strain Ellin345)
Length = 120
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y A ++DH+ENPR G L V + PACGD+++L ++ E G + + +F+ G
Sbjct: 2 YSARLLDHFENPRYAGELPGATAKV---RIENPACGDILELAAEIHE-GVVREIRFRAKG 57
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDA 498
C A+A S ++G++V + LK++ D+ +E+ S+P H LA DA
Sbjct: 58 CVPAMACGSAIATLIQGQSVAQLLKIRREDVLREVESVPQASGHAVHLALDA 109
>UniRef50_A5UR74 Cluster: SUF system FeS assembly protein, NifU
family; n=5; Chloroflexi (class)|Rep: SUF system FeS
assembly protein, NifU family - Roseiflexus sp. RS-1
Length = 132
Score = 67.7 bits (158), Expect = 2e-10
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y +++HY++PR G +D D + P CGD +++ +++ ENG I DA+F G
Sbjct: 5 YRELILEHYKHPRRRGRIDHPDVSAEEH---NPLCGDRVRIDLRI-ENGIITDARFDGRG 60
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLP----PVKLHCSMLAEDAIKAAL 513
C + AS+S+ TE + G V++A + + + +P PV++ C++L +K L
Sbjct: 61 CAISQASASMLTEEIVGMPVEQAKQFSKDQMLALIGIPLNHNPVRIKCALLPLKTLKVGL 120
>UniRef50_Q7UU01 Cluster: Nitrogen fixation protein NifU; n=1;
Pirellula sp.|Rep: Nitrogen fixation protein NifU -
Rhodopirellula baltica
Length = 144
Score = 66.1 bits (154), Expect = 7e-10
Identities = 39/119 (32%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y +V+DHYE+P + G+L+ ++ G P CGD + + +K+D++GK+ +A F+ G
Sbjct: 8 YEEHVLDHYEDPYHRGTLESAS-HMHEG--NNPLCGDRIVITLKLDDSGKVAEAWFEGEG 64
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL---SLPPVKLHCSMLAEDAIKAAL 513
C + AS+S+ E ++GKT++E +K + EL L P + C +L+ +++AL
Sbjct: 65 CVISQASASMLIERMEGKTIEE-VKAFTAEEMLELFGPKLTPNRQKCCLLSWKILQSAL 122
>UniRef50_O32163 Cluster: NifU-like protein; n=40; Bacilli|Rep:
NifU-like protein - Bacillus subtilis
Length = 147
Score = 65.7 bits (153), Expect = 9e-10
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +1
Query: 145 NVILAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIV- 321
N L Y ++DHY+NPRN G L+ D V + P CGD ++L +K+D G IV
Sbjct: 4 NANLDTLYRQVIMDHYKNPRNKGVLN--DSIVVD--MNNPTCGDRIRLTMKLD--GDIVE 57
Query: 322 DAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 423
DAKF+ GC ++AS+S+ T+ +KGK ++ AL +
Sbjct: 58 DAKFEGEGCSISMASASMMTQAIKGKDIETALSM 91
>UniRef50_Q83CI7 Cluster: NifU family protein; n=2; Coxiella
burnetii|Rep: NifU family protein - Coxiella burnetii
Length = 119
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/116 (31%), Positives = 59/116 (50%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y V+ ++ + G LDK D +V G + G + +L ++ +N I +AKF+ +G
Sbjct: 3 YSKEVLHYFFENVHAGELDKDDPHVRYGEIATSTEGHLFRLYLRC-QNDIITEAKFQAYG 61
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAAL 513
A A+ W +GKT DEA L + I K L+L +++H ++L E K L
Sbjct: 62 SVVATAACEYVCRWAEGKTFDEANHLDSDQIQKALNLSSLQVHAALLIERLWKKTL 117
>UniRef50_Q5UY39 Cluster: NifU-like protein; n=5;
Halobacteriaceae|Rep: NifU-like protein - Haloarcula
marismortui (Halobacterium marismortui)
Length = 142
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/113 (29%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSL-DKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVD-AKFKT 339
Y ++DHY+NPRN G + D ++G P CGD +++ + +DE+ + ++ F+
Sbjct: 9 YRQQILDHYKNPRNYGEIEDPTFTHIGEN----PMCGDEIRMDVVLDEDEETIEQVAFQG 64
Query: 340 FGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL--SLPPVKLHCSMLAE 492
GC + AS+S+ ++ + G V++ + DI + L + P+++ C++LAE
Sbjct: 65 DGCAISQASASMLSQELAGMAVEDLKAMDRDDITEMLGVDISPMRVKCAVLAE 117
>UniRef50_Q8F7C7 Cluster: NifU-like protein; n=4; Leptospira|Rep:
NifU-like protein - Leptospira interrogans
Length = 263
Score = 62.9 bits (146), Expect = 6e-09
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +1
Query: 268 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 447
CGD ++ +K+D + + DA + T GCG I + ++ATE+ KGKT+++ + +TDI
Sbjct: 36 CGDGYRIYLKIDSSETVTDASYTTTGCGFGIVALAMATEFAKGKTIEQLKSITSTDIEGM 95
Query: 448 LSLPPVKLHCSMLAEDAIKAALSDY 522
P + + A A+ A+ DY
Sbjct: 96 FEFPERRKNYPESAVAALLQAVRDY 120
>UniRef50_Q1V2E5 Cluster: Putative nifU-like protein; n=2;
Candidatus Pelagibacter ubique|Rep: Putative nifU-like
protein - Candidatus Pelagibacter ubique HTCC1002
Length = 156
Score = 62.9 bits (146), Expect = 6e-09
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGA-PACGDVMKLQIKVDENGKIVDAKFKTF 342
Y +++H +NPRN+ +K +N +G P CGD + + +K+DEN K+ D F+
Sbjct: 7 YQEIILEHGKNPRNL----RKTENFNKDAMGKNPLCGDNVHIFLKLDENKKVEDISFEGS 62
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVK 468
GC ++AS+S+ T+ +KGK E ++ N + P +K
Sbjct: 63 GCAISMASASIMTDLIKGKEEVEVKEIVNDFLGMIKENPELK 104
>UniRef50_Q2JCF1 Cluster: SUF system FeS assembly protein; n=37;
Actinomycetales|Rep: SUF system FeS assembly protein -
Frankia sp. (strain CcI3)
Length = 172
Score = 62.5 bits (145), Expect = 8e-09
Identities = 40/123 (32%), Positives = 65/123 (52%)
Frame = +1
Query: 154 LAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKF 333
L + Y ++DHY NP + G D D V P CGD + L++KV + G + D +
Sbjct: 3 LDSMYQEIILDHYRNPLHRGLRDPFDAEVHHV---NPTCGDEVTLRVKVSD-GVVEDVSY 58
Query: 334 KTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAAL 513
++ GC + AS+S+ ++ V GK+VD ALKL+ +A S ++ +L + A +
Sbjct: 59 ESEGCSISQASASVMSDLVIGKSVDAALKLEREFLALMQSRGTIEGDEDVLEDAVAFAGV 118
Query: 514 SDY 522
S Y
Sbjct: 119 SKY 121
>UniRef50_Q3E456 Cluster: Nitrogen-fixing NifU-like, N-terminal;
n=2; Chloroflexus|Rep: Nitrogen-fixing NifU-like,
N-terminal - Chloroflexus aurantiacus J-10-fl
Length = 130
Score = 62.5 bits (145), Expect = 8e-09
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSA 357
++DHY PR+ G L D +G G P CGD + + ++V NG++ D +F GC +
Sbjct: 14 LLDHYRQPRHYGELP--DAITYSG--GVPDCGDTLTVYLRVAPNGRLTDLQFTGQGCSVS 69
Query: 358 IASSSLATEWVKGKTVDEALKLKNTDIAKEL--SLPPVKLHCSMLAEDAIKAA 510
+ ++S+ E ++G TV + L L T + + + + HC+ L +KAA
Sbjct: 70 VGTASILIEQLQGATVADLLALDETAAVQIVGSEVFQARPHCATLIFRTLKAA 122
>UniRef50_A0RXA5 Cluster: Fe-S cluster formation protein; n=1;
Cenarchaeum symbiosum|Rep: Fe-S cluster formation
protein - Cenarchaeum symbiosum
Length = 135
Score = 62.5 bits (145), Expect = 8e-09
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSA 357
+I++ NP N ++ D T P CGD + + +K D I D F GC
Sbjct: 2 IIEYSRNPLNFHKMENPDV---THHDSNPLCGDSIDMDLKFDGE-TISDVSFHGSGCAIC 57
Query: 358 IASSSLATEWVKGKTVDEALKLKNTDIAKELS---LPPVKLHCSMLAEDAIKAAL 513
+A +S+ TE VKGK+V EA L+ D+ EL L V++ C++L+ +K AL
Sbjct: 58 MACTSVLTELVKGKSVSEARGLEKNDVLGELGLEHLQAVRIKCALLSLKVLKLAL 112
>UniRef50_A6Q4J9 Cluster: Putative uncharacterized protein; n=1;
Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
protein - Nitratiruptor sp. (strain SB155-2)
Length = 159
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +1
Query: 196 NPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIV-DAKFKTFGCGSAIASSS 372
NP N G + + D G G+++ + +K+D I+ + K++T GCG+ + S +
Sbjct: 18 NPTNYGEMKEYDAK---GFGKNAQTGEMVVIYLKIDPISTIIKEIKWQTNGCGTTLVSGA 74
Query: 373 LATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 552
L +E KGKT+ ++ K PP C + A AA+ DY +++ ENKE
Sbjct: 75 LFSEEYKGKTLQSGVEFTQDVFEKIKDNPPEDAACGEVVARAFMAAVQDYEARKRGENKE 134
>UniRef50_A1SV02 Cluster: SUF system FeS assembly protein, NifU
family protein; n=1; Psychromonas ingrahamii 37|Rep: SUF
system FeS assembly protein, NifU family protein -
Psychromonas ingrahamii (strain 37)
Length = 153
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +1
Query: 154 LAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGA-PACGDVMKLQIKVDENGKIVDAK 330
L A Y +IDH PRN KK ++ G P CGD + L +++D+N +I+DA
Sbjct: 5 LRALYQEVIIDHGRRPRN----SKKLEHPSCTQEGYNPLCGDRLTLYLRIDDN-RIIDAS 59
Query: 331 FKTFGCGSAIASSSLATEWVKGKTVDEALKL 423
F+ GC ++A+SSL TE +K TV EA +L
Sbjct: 60 FEGEGCAISMAASSLMTERIKNMTVTEARQL 90
>UniRef50_Q1JIL3 Cluster: IscU protein; n=11; Streptococcus
pyogenes|Rep: IscU protein - Streptococcus pyogenes
serotype M2 (strain MGAS10270)
Length = 159
Score = 60.5 bits (140), Expect = 3e-08
Identities = 40/95 (42%), Positives = 52/95 (54%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y A V DH + P + G LD V + P CGDV+ L +K DE+ KI D F G
Sbjct: 10 YMAVVADHSKRPHHHGQLD----GVEAVQLNNPTCGDVISLTVKFDED-KIEDIAFAGNG 64
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL 450
C + ASSS+ T+ V GK+ +EAL L DI E+
Sbjct: 65 CTISTASSSMMTDAVIGKSKEEALAL--ADIFSEM 97
>UniRef50_A6Q975 Cluster: Putative uncharacterized protein; n=1;
Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
protein - Sulfurovum sp. (strain NBC37-1)
Length = 152
Score = 59.7 bits (138), Expect = 6e-08
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = +1
Query: 172 ANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVD---ENGKIVDAKFKTF 342
A VI+H NP+N GSL + G+ P G+ + + ++V+ E I D KF+
Sbjct: 5 AQVIEHMMNPKNYGSLPGTNAE---GMGKNPENGEKVAIYMRVETDEEEPYIGDIKFQAI 61
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDY 522
GC + + + S+ TE KG ++ A L + + LP CS + AIKAA+ Y
Sbjct: 62 GCTTTVVAGSMLTEEAKGLNLNGAYNLVDATMKLLEKLPAEDAACSEMVALAIKAAVDTY 121
Query: 523 RIKQQTE 543
+K+Q +
Sbjct: 122 -VKRQED 127
>UniRef50_Q74JG6 Cluster: NifU-like protein; n=2; Lactobacillus|Rep:
NifU-like protein - Lactobacillus johnsonii
Length = 152
Score = 59.3 bits (137), Expect = 8e-08
Identities = 35/92 (38%), Positives = 51/92 (55%)
Frame = +1
Query: 154 LAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKF 333
L + Y A ++DH + PRN G L V P+CGD + L I + EN KI F
Sbjct: 6 LRSLYKAVILDHAQMPRNYGQLTDFSHET---TVYNPSCGDKIHLTILI-ENNKIKKIAF 61
Query: 334 KTFGCGSAIASSSLATEWVKGKTVDEALKLKN 429
GC + AS+S+ T+ VKGK++ EA++L +
Sbjct: 62 NGEGCTISKASASMMTDLVKGKSIKEAIELSH 93
>UniRef50_Q8FF43 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli O6|Rep: Putative uncharacterized
protein - Escherichia coli O6
Length = 160
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/109 (29%), Positives = 57/109 (52%)
Frame = -1
Query: 504 FNCVFCKHRAMKLDWW*GQLFSNICVLQF*CLINCFSFNPFSGKRAXXXXXXXXXXXXFG 325
F+ VFC++R + + FSNI V + F+PF + A
Sbjct: 42 FDRVFCQNRTVNFHRRQFKFFSNIGVFDSLRFVERLPFHPFGDQGAGSDSRTAAVSFKTR 101
Query: 324 INDFSILVHFDLQLHYVSTCRCTNEACTYIFIFLIQ*TNIARILVMVND 178
+ + + +V F+LQLH+V+T R T+ A + + +++ T++ RILVMV++
Sbjct: 102 VFNDTFIVDFNLQLHHVATGRRTHHAAADVLVVVVKGTHVTRILVMVDN 150
>UniRef50_A5UR82 Cluster: Nitrogen-fixing NifU domain protein; n=4;
Bacteria|Rep: Nitrogen-fixing NifU domain protein -
Roseiflexus sp. RS-1
Length = 129
Score = 58.4 bits (135), Expect = 1e-07
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +1
Query: 172 ANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCG 351
A +++HYE+PR+ G L D + TG G P CGDV+ + +KV+ +I F+ GC
Sbjct: 8 ARLLNHYEHPRHRGPLVDADVTL-TG--GHPECGDVITIYLKVEPPDRITAVSFEGRGCT 64
Query: 352 SAIASSSLATEWVKGKTVDEALKLKNTDIAK--ELSLPPVKLHCSMLAEDAIKAALSDYR 525
+ A++S+ TE G T + ++ E + + C+ LA +KAA+S R
Sbjct: 65 ISQAAASILTELAAGATFAAVETMTPDEMIDLLEREVVGTRPRCATLALRILKAAISTCR 124
Query: 526 I 528
+
Sbjct: 125 M 125
>UniRef50_Q2JUE7 Cluster: SUF system FeS assembly protein, NifU
family; n=5; Synechococcus|Rep: SUF system FeS assembly
protein, NifU family - Synechococcus sp. (strain
JA-3-3Ab) (Cyanobacteria bacteriumYellowstone A-Prime)
Length = 162
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENG-KIVDAKFKTF 342
Y +++ Y PRN G +D + P+CGD + L +++D +I D KF+
Sbjct: 10 YQQVILERYRKPRNFGRVDPVHRRQRGH---NPSCGDTIDLTLQLDPGQERIADIKFEGE 66
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKL 423
GC A+AS+ L + V+G+T+ EAL+L
Sbjct: 67 GCAIALASADLMADAVRGRTIPEALQL 93
>UniRef50_Q83BY1 Cluster: NifU family protein; n=14; Bacteria|Rep:
NifU family protein - Coxiella burnetii
Length = 158
Score = 57.6 bits (133), Expect = 2e-07
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
YH +IDH NPR+ G L+ + G P CGD + + + ++NG I DA+F+ G
Sbjct: 18 YHQLIIDHGRNPRHFGRLEMPT-HTHEGY--NPLCGDRLTVFFQ-EKNGVITDARFEGSG 73
Query: 346 CGSAIASSSLATEWVKGKTVDEA 414
C ++AS+SL E +KGK++ A
Sbjct: 74 CAISMASASLMMEALKGKSIQAA 96
>UniRef50_Q7MYK4 Cluster: Similarities with nitrogen fixation
proteins; n=1; Photorhabdus luminescens subsp.
laumondii|Rep: Similarities with nitrogen fixation
proteins - Photorhabdus luminescens subsp. laumondii
Length = 118
Score = 56.0 bits (129), Expect = 7e-07
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSA 357
+ID++ NP G+L + +G P CGD + + + +D G++ +A F+ +GC ++
Sbjct: 6 IIDNFCNPDCQGTLSAPTIKLA---LGNPVCGDKVDIDLTLDNQGRVNNACFRAWGCTAS 62
Query: 358 IASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHC 477
+A S+ KGKT++E L I L L P + HC
Sbjct: 63 LAMSNQFCRHAKGKTLEELNALSPEGIDALLGELEPAQQHC 103
>UniRef50_Q97E24 Cluster: NifU homolog involved in Fe-S cluster
formation; n=8; Clostridia|Rep: NifU homolog involved in
Fe-S cluster formation - Clostridium acetobutylicum
Length = 143
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +1
Query: 262 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 438
P+CGD + LQ+K+ EN I DA F GC + AS+S+ + +KGKTV+EA KL T I
Sbjct: 36 PSCGDDITLQLKI-ENNVIEDAAFIGVGCAISQASTSIMIDLIKGKTVEEAKKLVETFI 93
>UniRef50_Q62LM3 Cluster: NifU-like domain protein; n=14;
Burkholderiales|Rep: NifU-like domain protein -
Burkholderia mallei (Pseudomonas mallei)
Length = 163
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/87 (36%), Positives = 48/87 (55%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y +++H PR G L + + G P CGD +K+Q+++ E G+I D +F G
Sbjct: 18 YQELIVEHKRAPRRFGKL-AEPTHEARG--HNPQCGDDLKVQLRI-EGGRIGDIRFDGHG 73
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLK 426
C IAS+S+ TE V G+ VD A L+
Sbjct: 74 CAICIASASMMTEAVIGRDVDAARALQ 100
>UniRef50_A5EYF1 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Dichelobacter nodosus VCS1703A|Rep: SUF
system FeS assembly protein, NifU family - Dichelobacter
nodosus (strain VCS1703A)
Length = 146
Score = 55.2 bits (127), Expect = 1e-06
Identities = 33/86 (38%), Positives = 49/86 (56%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y ++DH +NPRN +L + TG P CGD +K+ ++++E G I D F G
Sbjct: 8 YQELILDHSKNPRNFHALTPCTHSA-TG--HNPLCGDNLKVFVRLNE-GVIADLSFVGDG 63
Query: 346 CGSAIASSSLATEWVKGKTVDEALKL 423
C + AS+S+ TE GKT++E KL
Sbjct: 64 CAISKASASMMTELAMGKTLEEFQKL 89
>UniRef50_A0LFS6 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nitrogen-fixing
NifU domain protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 141
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +1
Query: 268 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 447
CGD +++ + V +GKI A F+T GC ++A ++ A G T +EA ++ I +
Sbjct: 42 CGDTVEMFLMV-RDGKIRTASFETNGCIYSVACANTAVHMASGLTPEEARRITPDQIVEF 100
Query: 448 L-SLPPVKLHCSMLAEDAIKAALSDYR 525
L +LPP + HC+ A A++ AL+D R
Sbjct: 101 LETLPPEEEHCAEQAVKALRLALADAR 127
>UniRef50_Q123X7 Cluster: SUF system FeS assembly protein; n=8;
Bacteria|Rep: SUF system FeS assembly protein -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 149
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/86 (37%), Positives = 48/86 (55%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y ++DHY +P N G L ++ G P CGD + L ++V + G I +A+F+ G
Sbjct: 8 YQELIVDHYRHPHNFGPLAGANRRA-EGF--NPLCGDRLTLYLQVVD-GVIENARFEGSG 63
Query: 346 CGSAIASSSLATEWVKGKTVDEALKL 423
C + AS+SL T+ +KGKT E L
Sbjct: 64 CAISTASASLMTDALKGKTETEVENL 89
>UniRef50_A0LNT2 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nitrogen-fixing
NifU domain protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 154
Score = 54.4 bits (125), Expect = 2e-06
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +1
Query: 196 NPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSL 375
NPR + K K + V P CG+ M++ +++ E+ +IVD F T GCG + A L
Sbjct: 31 NPRQI-KFGKLPKATSSAKVTGP-CGETMEIHLEIQED-EIVDGSFVTDGCGPSKACGFL 87
Query: 376 ATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDY 522
A G+ +D+A ++ I + LP HC+ LA ++ A+ ++
Sbjct: 88 AVMLAIGRNLDDAAMIEGDTILDMIEDLPEDHHHCAYLAAATLQTAIHNH 137
>UniRef50_Q8F0D6 Cluster: NifU homolog involved in Fe-S cluster
formation; n=4; Leptospira|Rep: NifU homolog involved in
Fe-S cluster formation - Leptospira interrogans
Length = 144
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y ++DHY+NPR G L+ D G+ P CGD ++L I +D N +I + + G
Sbjct: 8 YKEVILDHYQNPRFRGKLESADL-YEHGI--NPLCGDELELTINLDGN-RITEIRVTGKG 63
Query: 346 CGSAIASSSLATEWVKGKTVDEA 414
C + AS S+ E + GKT+ EA
Sbjct: 64 CSISQASGSMMAESIYGKTIAEA 86
>UniRef50_Q88WY9 Cluster: NifU-like protein; n=53; Bacilli|Rep:
NifU-like protein - Lactobacillus plantarum
Length = 155
Score = 53.6 bits (123), Expect = 4e-06
Identities = 29/93 (31%), Positives = 51/93 (54%)
Frame = +1
Query: 154 LAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKF 333
L+ Y ++DH ++P + +L + + P CGDV+ L I++D + +I D F
Sbjct: 6 LSGLYREVILDHGDHPHHKNALPNATHAI---TLKNPTCGDVINLAIQLDAHDQIEDIGF 62
Query: 334 KTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 432
GC + AS+S+ T+ V GK+ ++AL + T
Sbjct: 63 TGEGCTISQASASMMTDAVMGKSKEQALAMAKT 95
>UniRef50_Q1AZN5 Cluster: SUF system FeS assembly protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: SUF system FeS
assembly protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 140
Score = 52.4 bits (120), Expect = 9e-06
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y ++DHY PRN G L+ D ++ L+ P CGD + + + E ++ +A F G
Sbjct: 6 YGQVIMDHYRRPRNRGELE--DADLTRHLLN-PLCGDEVTVYARF-EGDRVAEASFTGRG 61
Query: 346 CGSAIASSSLATEWVKGKTVDEA 414
C + AS+S+ TE ++GK+ +EA
Sbjct: 62 CSISQASASMMTERLRGKSREEA 84
>UniRef50_Q6APN8 Cluster: Related to nitrogen fixation protein; n=1;
Desulfotalea psychrophila|Rep: Related to nitrogen
fixation protein - Desulfotalea psychrophila
Length = 136
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 268 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 447
CGD M++ +++ ++ ++ ++ + GC + A +GKT++E K+ +
Sbjct: 44 CGDTMEMSLRIRDD-RVEKTRYSSDGCSISQQCIEAAAMLAQGKTIEEVRKINMMHVIDI 102
Query: 448 LS-LPPVKLHCSMLAEDAIKAALSDYRIKQQ 537
+ LP LHC+ LAE ++ A+ DY KQ+
Sbjct: 103 VGDLPDSHLHCAQLAETTLQHAIGDYVQKQR 133
>UniRef50_Q01180 Cluster: Nitrogen fixation protein nifU; n=4;
Rhodobacter sphaeroides|Rep: Nitrogen fixation protein
nifU - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 246
Score = 52.0 bits (119), Expect = 1e-05
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +1
Query: 181 IDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAI 360
+D + NPRN G L+ D VGT G+ GD ++L +++ E G++ +A+F FG AI
Sbjct: 9 LDLFFNPRNAGPLEAADA-VGTA--GSLEVGDAIRLMLRI-EAGRVAEARFLAFGGAHAI 64
Query: 361 ASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDY 522
A S T V G + A + +I + LP + + A A++ AL+ Y
Sbjct: 65 ACGSALTVLVTGLDLAAARAVTPEEIEAAVGGLPAPRRPAAARAWSALQIALAAY 119
>UniRef50_A4BSU8 Cluster: Putative uncharacterized protein; n=1;
Nitrococcus mobilis Nb-231|Rep: Putative uncharacterized
protein - Nitrococcus mobilis Nb-231
Length = 123
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +1
Query: 313 KIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAE 492
+IVDA+++ FGC +AIA+++ + V G L IA+ L+LP K +++ E
Sbjct: 45 RIVDARYEVFGCPAAIAAAAWTAQRVVGAAPAAVASLHGRTIAELLALPVEKTGVALVVE 104
Query: 493 DAIKAALS 516
DA++AAL+
Sbjct: 105 DAVRAALA 112
>UniRef50_Q6YQA8 Cluster: NifU homolog; n=2; Candidatus Phytoplasma
asteris|Rep: NifU homolog - Onion yellows phytoplasma
Length = 147
Score = 50.0 bits (114), Expect = 5e-05
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 166 YHANVIDHYENPRNVG-SLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTF 342
Y +I HY+ P+N G S D N+ V +CGD + LQIK+ N K++D K++T
Sbjct: 8 YRDLIIKHYQEPQNWGLSQDPDFINITNKNV---SCGDSISLQIKI-SNQKLIDIKYETQ 63
Query: 343 GCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 441
C AS+SL + +K + + L+ N +A
Sbjct: 64 ACAICRASASLMSIHLKNLEIQQTLEKINHFLA 96
>UniRef50_A4M9C6 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Petrotoga mobilis SJ95|Rep: SUF system FeS
assembly protein, NifU family - Petrotoga mobilis SJ95
Length = 145
Score = 49.2 bits (112), Expect = 8e-05
Identities = 30/86 (34%), Positives = 48/86 (55%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y ++D+ +N R + K G L +CGD + L +KV++N I + F G
Sbjct: 12 YSDIILDYAKNERYKKEIQNAKKAEGKNL----SCGDEITLYLKVEDN-IIKEITFTGHG 66
Query: 346 CGSAIASSSLATEWVKGKTVDEALKL 423
C + AS+S+ E+++GKTVDEA K+
Sbjct: 67 CIISQASASMMCEYLEGKTVDEANKI 92
>UniRef50_Q82UN6 Cluster: NifU-like N terminal domain; n=5;
Bacteria|Rep: NifU-like N terminal domain - Nitrosomonas
europaea
Length = 159
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = +1
Query: 154 LAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKF 333
L + Y ++DH PRN G+L + + TG P CGD ++L I + + G I + F
Sbjct: 3 LKSIYQEVILDHNRKPRNYGAL-RSPTHHATG--HNPLCGDRIELDINMLD-GHIEEIAF 58
Query: 334 KTFGCGSAIASSSLATEWVKGKTVDEA 414
+ C ASSS+ T VKGK+ EA
Sbjct: 59 QGESCAICKASSSMMTNAVKGKSHQEA 85
>UniRef50_A3LER3 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas aeruginosa 2192|Rep: Putative
uncharacterized protein - Pseudomonas aeruginosa 2192
Length = 197
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/110 (29%), Positives = 55/110 (50%)
Frame = -1
Query: 495 VFCKHRAMKLDWW*GQLFSNICVLQF*CLINCFSFNPFSGKRAXXXXXXXXXXXXFGIND 316
VF ++ A+ L GQLF + VL L+ + +P G+ A G+ D
Sbjct: 85 VFGENGAVDLHRRQGQLFGDGGVLDGFRLVQGLALHPLGGEGAGGDRGTATVGLELGVFD 144
Query: 315 FSILVHFDLQLHYVSTCRCTNEACTYIFIFLIQ*TNIARILVMVNDVCMI 166
++LV DLQ H+V+ R + A + I ++ ++AR+ V+V+D+ I
Sbjct: 145 HALLVDLDLQAHHVAAGRRADHAGADVGIGSVELADVARVFVVVDDLFAI 194
>UniRef50_Q2LWF0 Cluster: NifU-like protein involved in Fe-S cluster
formation; n=3; Syntrophus aciditrophicus SB|Rep:
NifU-like protein involved in Fe-S cluster formation -
Syntrophus aciditrophicus (strain SB)
Length = 238
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +1
Query: 265 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAK 444
+CGD M++ +K + ++ D T GC + +GKTV E + I +
Sbjct: 47 SCGDTMEIALKFN-GPRVEDVHCWTDGCAISKMCVETVGMLARGKTVPELRTIDTASILE 105
Query: 445 ELS-LPPVKLHCSMLAEDAIKAALSDYRIK 531
+ LP +HC++LAE ++ A+S Y +K
Sbjct: 106 RVGQLPETHMHCAVLAETTLQKAVSFYTLK 135
>UniRef50_UPI00001D2CFF Cluster: UPI00001D2CFF related cluster; n=1;
unknown|Rep: UPI00001D2CFF UniRef100 entry - unknown
Length = 51
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +1
Query: 448 LSLPPVKLHCSMLAEDAIKAALSDYRIKQ 534
LSLPPVK+HCS+ AEDA++AA++DY+ +Q
Sbjct: 15 LSLPPVKIHCSVPAEDAMRAAVADYQAEQ 43
>UniRef50_A4EB20 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 144
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +1
Query: 262 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 441
P+CGD + LQ++V EN I +A F GC + AS+ + + + G+TV+EA +L +A
Sbjct: 35 PSCGDELTLQLRV-ENDVIEEASFTGHGCAISQASADIMADLITGETVEEARRLAGLFLA 93
>UniRef50_Q98R36 Cluster: NITROGEN FIXATION PROTEIN NIFU; n=1;
Mycoplasma pulmonis|Rep: NITROGEN FIXATION PROTEIN NIFU
- Mycoplasma pulmonis
Length = 144
Score = 46.8 bits (106), Expect = 4e-04
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Frame = +1
Query: 178 VIDHYENPRNVG-SLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGS 354
++ HYE P N+ +LD+K N + + +C D + +++++D+N + + F GC
Sbjct: 13 IMKHYEFPINLDKNLDEKTANQ----IYSSSCADSISIKLEIDKN-IVKNISFNGSGCAI 67
Query: 355 AIASSSLATEWVKGKTVDEALKL----KNTDIAKE 447
I+S+ L E +K K +DE L + KN AKE
Sbjct: 68 FISSTDLLLEQIKNKNIDEVLDIIENYKNMINAKE 102
>UniRef50_Q8EV25 Cluster: Nitrogen fixation protein NifU; n=1;
Mycoplasma penetrans|Rep: Nitrogen fixation protein NifU
- Mycoplasma penetrans
Length = 148
Score = 46.8 bits (106), Expect = 4e-04
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDK--NVGTGLVGAPA-CGDVMKLQIKVDENGKIVDAKFKTFGC 348
++DHYE P N S D+ K ++ A C D + L +K +ENG IVD KF GC
Sbjct: 15 ILDHYEIPDNKISEDEASKLNDIYVSFNNRTASCIDNLTLYLK-EENGIIVDVKFSGIGC 73
Query: 349 GSAIASSSLATEWVKGKTVDE 411
+ AS+ + +K K V++
Sbjct: 74 AISTASTDIFCTMIKNKKVND 94
>UniRef50_Q3A7R9 Cluster: NifU-like protein; n=2;
Desulfuromonadales|Rep: NifU-like protein - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 335
Score = 46.4 bits (105), Expect = 6e-04
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 241 GTGLVGAPACGDVMKLQIKVD---ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDE 411
GTG VG + ++ ++ + I D ++ FGCG ++A+ + A E K +
Sbjct: 26 GTGEVGMAHGEEGTRIAVRFTVHLQGALITDVGYQVFGCGYSMAACAAAAELACNKNLPS 85
Query: 412 ALKLKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIKQQT 540
A+ + + + L LPP + +C+ LA +A++AAL+ QT
Sbjct: 86 AMAIDASQVDALLDGLPPERSYCADLAVEALQAALASASGDAQT 129
>UniRef50_Q0AAQ4 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Alkalilimnicola ehrlichei MLHE-1|Rep: SUF
system FeS assembly protein, NifU family -
Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 171
Score = 46.0 bits (104), Expect = 8e-04
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 103 GIRRCMCLKGF--GSPNVILAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGD 276
G RR L F G L+ Y V+ H PRN L+ + G P CGD
Sbjct: 8 GRRRLGILTAFITGETMSKLSDLYRKIVLAHNRQPRNHHPLEPCSHHA-EGY--NPVCGD 64
Query: 277 VMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 423
+++ +++DE G++ A F C ASSS+ TE V G E L
Sbjct: 65 HIQVYLRLDEAGRVAAASFTGEACAICTASSSMMTEVVAGLDASEVAAL 113
>UniRef50_A1IF14 Cluster: NifU protein; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: NifU protein -
Candidatus Desulfococcus oleovorans Hxd3
Length = 105
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +1
Query: 268 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 447
CGD +++ IK + I F GC + AS++ +GK ++ A ++ +
Sbjct: 14 CGDTVEMFIKKGTDSIIEQVLFDIRGCRNTHASANAVAVLAEGKKIEAAWEITPEAVIDL 73
Query: 448 L-SLPPVKLHCSMLAEDAIKAALSDYRIKQQT 540
L +LPP HC+ LA A AL+D R + ++
Sbjct: 74 LETLPPDHFHCAELAVGAFYLALADCRNQHES 105
>UniRef50_Q9X192 Cluster: NifU-like protein; n=3;
Thermotogaceae|Rep: NifU-like protein - Thermotoga
maritima
Length = 142
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Frame = +1
Query: 265 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEAL--------- 417
+CGD + L +KV E+G + DAKF+ GC + AS+SL E + G+ V+E
Sbjct: 37 SCGDEITLYLKV-EDGVVKDAKFEGMGCVISQASASLMLERIIGERVEEIFSLIEEAEKM 95
Query: 418 ---------KLKNTDIAKELSLPPVKLHCSMLAEDAIKAAL 513
KLKN + ++ P ++ C +LA +K AL
Sbjct: 96 SRGENFDEGKLKNVTLMSDIKNYPARVKCFILAWKTLKEAL 136
>UniRef50_Q9KFV2 Cluster: Nitrogen fixation protein; n=2;
Bacillus|Rep: Nitrogen fixation protein - Bacillus
halodurans
Length = 149
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/88 (30%), Positives = 48/88 (54%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y VIDH + RN + ++V P CGDV+ L +++ + + D F G
Sbjct: 6 YRQLVIDHAKKRRNHRRIS--GEHVQQTHYKNPTCGDVITLYVEL-QGHHVDDIAFVGEG 62
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKN 429
C ++AS+S+ TE +KG +++EA +++
Sbjct: 63 CSISMASASMMTELLKGVSLEEASSMRH 90
>UniRef50_Q14L11 Cluster: Putative iron-sulfur cluster assembly
protein; n=1; Spiroplasma citri|Rep: Putative
iron-sulfur cluster assembly protein - Spiroplasma citri
Length = 150
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/94 (28%), Positives = 49/94 (52%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSA 357
++DHY P+ G L KK V + + +C D + L++ ++ N KI+ A+F GC +
Sbjct: 15 IMDHYSEPQYKG-LTKKP-TVYSIHQASESCIDDIYLELMIERN-KIISARFDGVGCAIS 71
Query: 358 IASSSLATEWVKGKTVDEALKLKNTDIAKELSLP 459
ASS + + ++GK + + L + +A P
Sbjct: 72 TASSDIMAQELEGKAIKDGLAIIENYLAMVFDQP 105
>UniRef50_Q9PQ37 Cluster: Conserved hypothetical; n=1; Ureaplasma
parvum|Rep: Conserved hypothetical - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 155
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/84 (29%), Positives = 44/84 (52%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSA 357
++ HYE+P+N + + N + CGD + + +K++ KI+D F GC +
Sbjct: 16 IMQHYEHPKNKVCFVQDEINYLSYHNTTEGCGDDITVYVKLNHQ-KIIDVVFLGTGCAIS 74
Query: 358 IASSSLATEWVKGKTVDEALKLKN 429
I+S+ + E VK ++ AL L N
Sbjct: 75 ISSTDIICELVKNLDLNNALLLIN 98
>UniRef50_Q1WR14 Cluster: IscU protein; n=1; Lactobacillus
salivarius subsp. salivarius UCC118|Rep: IscU protein -
Lactobacillus salivarius subsp. salivarius (strain
UCC118)
Length = 149
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y +++ +PR+ G L+ + V + P CGDV+ L +++N KI D F +G
Sbjct: 8 YRQAILEEANHPRHKGKLENESVEVE---LRNPTCGDVITLTALIEDN-KIKDIAFDGYG 63
Query: 346 CGSAIASSSLATEWVKGKTVD 408
C + +S+S+ T V K D
Sbjct: 64 CTISQSSASIMTNEVLNKDFD 84
>UniRef50_A7CVW5 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Opitutaceae bacterium TAV2|Rep: SUF system
FeS assembly protein, NifU family - Opitutaceae
bacterium TAV2
Length = 165
Score = 44.4 bits (100), Expect = 0.002
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVD-------------- 303
Y A ++DH + PRN G L ++ V TG P CGD + ++V+
Sbjct: 8 YQAVILDHNKRPRNRGKLPSANR-VATG--DNPTCGDNCTVYLRVETSAPVDARGGGGGG 64
Query: 304 -ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEA 414
E +I + F+ GC + AS+SL T +KG+T EA
Sbjct: 65 AEAERIAEISFEGAGCAISQASASLMTTQLKGRTTAEA 102
>UniRef50_Q6YRB5 Cluster: NifU-like protein; n=2; Candidatus
Phytoplasma asteris|Rep: NifU-like protein - Onion
yellows phytoplasma
Length = 145
Score = 43.2 bits (97), Expect = 0.006
Identities = 27/95 (28%), Positives = 47/95 (49%)
Frame = +1
Query: 145 NVILAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVD 324
N + + H ++ HY NP+N D + CGD + +Q+K D N KI+D
Sbjct: 5 NKMFDSKKHEIIMKHYHNPQN--QTDVRLPGYIPFEKQTSYCGDKVIIQLKCD-NNKIID 61
Query: 325 AKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 429
K++ C +AS+S+ + +++ T +AL N
Sbjct: 62 IKYEANVCSICVASASVMSVYLQHLTKTQALNKIN 96
>UniRef50_Q6KIL2 Cluster: Aminotransferase protein U homolog; n=1;
Mycoplasma mobile|Rep: Aminotransferase protein U
homolog - Mycoplasma mobile
Length = 142
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/84 (27%), Positives = 47/84 (55%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSA 357
++ HY +P N +++ + N + + +C D + L +K+ EN +VDAKF+ GC
Sbjct: 12 IMKHYSSPIN--KVEEIETNSKSIYRHSASCVDEINLNLKI-ENDFLVDAKFQGVGCAVF 68
Query: 358 IASSSLATEWVKGKTVDEALKLKN 429
++S+ + E +K K + + ++ N
Sbjct: 69 LSSADIFLEEIKNKPLSKVNEIAN 92
>UniRef50_O42770 Cluster: Putative uncharacterized protein; n=1;
Paxillus involutus|Rep: Putative uncharacterized protein
- Paxillus involutus (Naked brimcap)
Length = 47
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 463 VKLHCSMLAEDAIKAALSDYRIK 531
VKLHCSMLAEDAI++A+ DYR K
Sbjct: 1 VKLHCSMLAEDAIRSAIRDYRSK 23
>UniRef50_Q8G5Y3 Cluster: Putative uncharacterized protein; n=4;
Bifidobacterium|Rep: Putative uncharacterized protein -
Bifidobacterium longum
Length = 179
Score = 40.7 bits (91), Expect = 0.029
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 262 PACGDVMKLQIKV--DENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 432
P CGD + ++V DE I + GC + AS S+ + V GKTVDEA+ L+ T
Sbjct: 62 PTCGDEATIHVEVSDDEPHTIKRLVWDGHGCSISQASLSVMVDLVDGKTVDEAMDLEQT 120
>UniRef50_O83624 Cluster: Nitrogen fixation protein; n=2;
Treponema|Rep: Nitrogen fixation protein - Treponema
pallidum
Length = 147
Score = 40.7 bits (91), Expect = 0.029
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 262 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALK 420
P+CGD + L IK E +I D F GC + AS+++ E +KG +V +A K
Sbjct: 36 PSCGDDLTLLIK-REGDRIADVAFLGTGCAVSTASTNILIELIKGASVAQAQK 87
>UniRef50_Q6MEW2 Cluster: Putative iron-sulfur cluster assembly
protein nifU; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative iron-sulfur cluster assembly protein
nifU - Protochlamydia amoebophila (strain UWE25)
Length = 263
Score = 40.3 bits (90), Expect = 0.039
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGT-----GLVGAPACGDVMKLQIKVD-ENGKIVDA 327
Y ++ + PR +G +K+ G G A G+ + L VD ++G IVDA
Sbjct: 15 YSKKLLAKIDKPRCMGFFNKEQSEERAMRLIEGREGKLADGNSVILYWLVDPDDGIIVDA 74
Query: 328 KFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPP 462
KF+ +G + I ++ +A E V GK D+A ++ + K++ P
Sbjct: 75 KFQAYGQSALIGAAEVACELVIGKNYDQAKRISVDLLDKQVRDKP 119
>UniRef50_A1ZYV1 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Microscilla marina ATCC 23134|Rep: SUF
system FeS assembly protein, NifU family - Microscilla
marina ATCC 23134
Length = 142
Score = 40.3 bits (90), Expect = 0.039
Identities = 26/89 (29%), Positives = 43/89 (48%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y + ++ H + P N ++ + P CGD +L I + E I A F +G
Sbjct: 9 YQSVILTHNKTPHNFKKAEELPLH---SEAYNPLCGDHFQLYISL-EGAVIQQAFFHGYG 64
Query: 346 CGSAIASSSLATEWVKGKTVDEALKLKNT 432
C + AS+S+ + ++GKT+ EA L T
Sbjct: 65 CAVSKASTSVLLQTIEGKTLTEAKTLIET 93
>UniRef50_Q7NBI8 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma gallisepticum|Rep: Putative uncharacterized
protein - Mycoplasma gallisepticum
Length = 144
Score = 39.9 bits (89), Expect = 0.051
Identities = 22/82 (26%), Positives = 40/82 (48%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSA 357
+ID+Y+NP+N D N + +C D L + + ++ +VD KF GC +
Sbjct: 13 IIDYYQNPKNFIKEPISDPNYKVIKTKSDSCADQFDLYLLIKDD-LLVDLKFSGSGCIIS 71
Query: 358 IASSSLATEWVKGKTVDEALKL 423
+ ++++ K +DE KL
Sbjct: 72 QTTFDFLSKYLINKKLDEVKKL 93
>UniRef50_Q4A687 Cluster: Nitrogen fixation protein NifU; n=2;
Mycoplasma synoviae 53|Rep: Nitrogen fixation protein
NifU - Mycoplasma synoviae (strain 53)
Length = 147
Score = 38.7 bits (86), Expect = 0.12
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNV-GTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGS 354
++DHY NPR+ DKN+ + C D + + + E+ K+ D K T GC
Sbjct: 17 IMDHYVNPRHF------DKNILEKNVFYNNTCSDKLVVNATI-EDKKLKDIKHYTQGCLI 69
Query: 355 AIASSSLATEWVKGKTVDEALKLKN 429
+S+S+ + ++ K + EA ++ N
Sbjct: 70 CASSASIFIDQIQNKNLSEAFEINN 94
>UniRef50_Q5K806 Cluster: Trehalose transport-related protein,
putative; n=1; Filobasidiella neoformans|Rep: Trehalose
transport-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 546
Score = 37.5 bits (83), Expect = 0.27
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -2
Query: 437 ISVFFNFSASSTVFPLTHSVARELEAIAEPHPKVLNLASTIFPFSSTLICNFIT 276
+ V NFS ++T FP+T+++A E+ A K + L ++ SS +ICN IT
Sbjct: 409 VMVIINFSTNATFFPVTYTIAAEVPA-TRVRAKTMVLGRGVYLISS-IICNQIT 460
>UniRef50_Q97G09 Cluster: NifU-related domain containing protein;
n=67; Bacteria|Rep: NifU-related domain containing
protein - Clostridium acetobutylicum
Length = 230
Score = 36.7 bits (81), Expect = 0.48
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +1
Query: 259 APACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 438
AP G KL + V E G I +A +T GC S+++A+E + GKT+ EAL NTD+
Sbjct: 50 APQQG-ACKLTLNVKE-GVIEEALVETIGCSGMTHSAAMASEILPGKTILEAL---NTDL 104
>UniRef50_Q821N4 Cluster: NifU protein, putative; n=6;
Chlamydophila|Rep: NifU protein, putative -
Chlamydophila caviae
Length = 273
Score = 35.9 bits (79), Expect = 0.84
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +1
Query: 307 NGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVK 468
NGKI+DAKF+ FG + + + V GKT +A L I EL P K
Sbjct: 67 NGKIIDAKFQYFGHPFLLVLAEVTCNLVIGKTYAQAYNLTVNTIDTELRSHPNK 120
>UniRef50_Q1AXD4 Cluster: Nitrogen-fixing NifU-like protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Nitrogen-fixing
NifU-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 134
Score = 35.5 bits (78), Expect = 1.1
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Frame = +1
Query: 172 ANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCG 351
A +++H NPR+ G + D ++ G +P CG + + +K D +G I F G
Sbjct: 8 ARLVEHARNPRHRGVIRDADVSMPGG---SPECGGSVVVYLKADGDGGIAGLSFTGQGDT 64
Query: 352 SAIASSSLATEWVKGKT--VDEALKLKNTDIAKELSLPPV--KLHCSMLAEDAIKAALSD 519
+ ++ LA E + + +++ L L +E+ V + + L IK A+
Sbjct: 65 ISQGATDLAIEKILAERMGLEDVLGLSYDRFIEEVGRDVVGSRTRNATLGLSTIKNAVRK 124
Query: 520 YR 525
YR
Sbjct: 125 YR 126
>UniRef50_A7BC55 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 158
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFG 345
Y ++DH G D + + V P CGD + L + +D ++ ++ G
Sbjct: 8 YQQVILDHAREKHGAG--DPSGMDASSHQVN-PTCGDEVTLGVTLDGE-RLASLQWDGDG 63
Query: 346 CGSAIASSSLATEWVKGKTVDEALKL 423
C + AS S+ T+ +GK+ +E +L
Sbjct: 64 CSISRASLSMMTDLTQGKSAEEIGRL 89
>UniRef50_Q0FGM6 Cluster: NifU-related protein involved in Fe-S
cluster formation; n=2; Alphaproteobacteria|Rep:
NifU-related protein involved in Fe-S cluster formation
- alpha proteobacterium HTCC2255
Length = 147
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 241 GTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDE 411
GT +P CG +++ I V+E GKI D C ASSS+ E + G +D+
Sbjct: 33 GTASRRSPMCGSNLQVWINVNE-GKITDFSHDVKTCALGQASSSIIAEKIIGLGIDQ 88
>UniRef50_UPI0000F2BF27 Cluster: PREDICTED: similar to hCG2041257;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG2041257 - Monodelphis domestica
Length = 915
Score = 33.9 bits (74), Expect = 3.4
Identities = 32/98 (32%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = -2
Query: 494 SSASIEQ*SLTGGKDSSLAISVFFNFS-ASSTVFPLTH-SVARELEAIAEPHPKVLNLAS 321
S+AS +LT G +S S + S AS T LT S+A + A P L S
Sbjct: 602 STASTSGSTLTSGSTASPTASTLTSGSTASPTASTLTSGSIASTSGSTASPTASTLTSGS 661
Query: 320 TIFPFSSTLICNFITSPHAGAPTRPVPTFLSFLSNEPT 207
T P +STL SP A T S + PT
Sbjct: 662 TASPIASTLTSGSTASPTASTLTSGSTVSTSGSTASPT 699
>UniRef50_Q73LQ8 Cluster: Putative uncharacterized protein; n=1;
Treponema denticola|Rep: Putative uncharacterized
protein - Treponema denticola
Length = 848
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 400 TVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQ 534
T ++A+K N D A++LS P KLHCS + L + R+++
Sbjct: 757 TDEKAIKKANEDFARKLSYAPEKLHCSSFDSFQQRENLFEMRLER 801
>UniRef50_Q2JM75 Cluster: WD-repeat/protein kinase domain protein;
n=2; Synechococcus|Rep: WD-repeat/protein kinase domain
protein - Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 759
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 382 EWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSM---LAEDAIKAALSD 519
EWV+G T+++AL L N +L+ P ++HC E ++A L D
Sbjct: 109 EWVEGPTLEQALLLGNATERGQLTTPSRQMHCHWGHDWTEAEVRALLQD 157
>UniRef50_A6GBA1 Cluster: Adenosylmethionine--8-amino-7-oxononanoate
transaminase; n=2; Plesiocystis pacifica SIR-1|Rep:
Adenosylmethionine--8-amino-7-oxononanoate transaminase
- Plesiocystis pacifica SIR-1
Length = 462
Score = 33.5 bits (73), Expect = 4.5
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = -2
Query: 329 LASTIFPFSSTLICNFITSPHAGAPTRPVPTFLSFLSNEPTLRGFS*WSMTFA**GAARI 150
L+ + P ++TLI N +P G+P+ +F N T FA R
Sbjct: 304 LSGGVLPLAATLIRNGFEAPFHGSPSNTFAHSHTFTGNPVTCAAGLASLAVFA---EERT 360
Query: 149 TLGLPKPLRHIHR-RIPLIKKAILYISEKQIQMINVLI 39
GLP + H+ R R+ L ++ I +Q M+ L+
Sbjct: 361 LEGLPARIAHMERLRLQLTQRHAAVIESRQAGMVAALV 398
>UniRef50_A5IXL2 Cluster: Nitrogen fixation protein NifU; n=1;
Mycoplasma agalactiae|Rep: Nitrogen fixation protein
NifU - Mycoplasma agalactiae
Length = 130
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +1
Query: 265 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEAL 417
+CGD ++ + EN + D F GC I+S++L +++ T+DE+L
Sbjct: 24 SCGDYLEADYII-ENKILKDLHFNGNGCAYFISSANLLCKYLNSTTIDESL 73
>UniRef50_Q4ZVI2 Cluster: Amino acid adenylation; n=4;
Pseudomonas|Rep: Amino acid adenylation - Pseudomonas
syringae pv. syringae (strain B728a)
Length = 1370
Score = 33.1 bits (72), Expect = 5.9
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +1
Query: 277 VMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSL 456
+M LQ ++ +G GSA A LA EWV+ V L NTD+ + S+
Sbjct: 418 MMVLQNTPGNAARMPGLSMTPYGTGSATAKFDLAFEWVERDGVLSLLVEYNTDLFDQTSI 477
Query: 457 PPVKLHCSMLAE 492
+ H L E
Sbjct: 478 ERLSGHYRQLLE 489
>UniRef50_Q04EW3 Cluster: Fe-S cluster formation protein, NifU-like;
n=1; Oenococcus oeni PSU-1|Rep: Fe-S cluster formation
protein, NifU-like - Oenococcus oeni (strain BAA-331 /
PSU-1)
Length = 146
Score = 33.1 bits (72), Expect = 5.9
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 262 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATE 384
P CGDV++LQIKV + I F+ GC + AS+S+ +
Sbjct: 39 PNCGDVLELQIKVSDR-HITAIAFQGQGCTISQASASILAD 78
>UniRef50_Q0A8C0 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Alkalilimnicola ehrlichei MLHE-1|Rep: Nitrogen-fixing
NifU domain protein - Alkalilimnicola ehrlichei (strain
MLHE-1)
Length = 144
Score = 32.7 bits (71), Expect = 7.8
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 166 YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAK-FKTF 342
Y ++DHY +PR G ++ G CGD +LQ+ + +G V A F
Sbjct: 5 YRDIILDHYRHPRRFGPVEHFPLR---GEARNALCGD--ELQLGLALSGDRVSAMGFHGR 59
Query: 343 GCGSAIASSSLATEWVKG 396
GC +A++SL E + G
Sbjct: 60 GCAVCMAAASLCCERLPG 77
>UniRef50_Q4N5X5 Cluster: Phenylalanyl-tRNA synthetase, putative;
n=1; Theileria parva|Rep: Phenylalanyl-tRNA synthetase,
putative - Theileria parva
Length = 570
Score = 32.7 bits (71), Expect = 7.8
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 124 LKGFGSPNVILAAPYHANVIDHYE-NPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKV 300
LK P +L N+I H N ++VG D DK+VG GLV + G+ + V
Sbjct: 353 LKNGEQPTELLGCGVLKNIIIHNNFNLKSVGEKDFSDKSVGEGLVVDKSVGEGLVCDKSV 412
Query: 301 DENGKIVDAK 330
E ++VD K
Sbjct: 413 GE--ELVDDK 420
>UniRef50_A0CSY9 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_26, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1018
Score = 32.7 bits (71), Expect = 7.8
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Frame = +1
Query: 169 HANVIDHYENPRNVGSLDKKDKN----VGTGLVGAPACGDVMKLQIKVDENG-KIVDAKF 333
+ ++ ++++ +N +D + +N V + D + K +EN +IV K
Sbjct: 888 YEQMLQNFQSMKNQSRIDYQQENQTIKVSMQMNECEHISDFVIFSDKQNENQLEIVKKKT 947
Query: 334 KTFGCGSAIASSSLATEWVKGKT-VDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAA 510
TF I S + + V+G T + +K K DI S+P + LA+ K
Sbjct: 948 VTFN-DQLIQQSPIDKDKVQGGTNFSDFMKTKALDILSSDSIPIIPQDTFTLAQLQPKGG 1006
Query: 511 LSDYRIKQQTEN 546
+S + KQQ EN
Sbjct: 1007 ISFLQYKQQLEN 1018
>UniRef50_P47579 Cluster: Uncharacterized protein MG337; n=1;
Mycoplasma genitalium|Rep: Uncharacterized protein MG337
- Mycoplasma genitalium
Length = 138
Score = 32.7 bits (71), Expect = 7.8
Identities = 23/88 (26%), Positives = 43/88 (48%)
Frame = +1
Query: 178 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSA 357
+ID Y N + L K + T + C D + + +D+N KI F GC +
Sbjct: 9 IIDIYSNLKYKKPLKSFQKILTTS--DSDNCEDFFNIGLNIDKN-KITAIGFDGDGCIIS 65
Query: 358 IASSSLATEWVKGKTVDEALKLKNTDIA 441
++ L+ + ++ KT+++A K+ + IA
Sbjct: 66 TIATELSIKAIENKTINQAKKILSDLIA 93
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,902,391
Number of Sequences: 1657284
Number of extensions: 11371706
Number of successful extensions: 30221
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 29192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30109
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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