Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f09r
(763 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14QM2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q73MN6 Cluster: Flagellar hook-associated protein 2; n=... 42 0.013
UniRef50_Q11SM1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.038
UniRef50_Q2NHL9 Cluster: Conserved hypothetical membrane-spannin... 39 0.16
UniRef50_A4FZP3 Cluster: Pyrrolo-quinoline quinone; n=3; Methano... 39 0.16
UniRef50_Q6L284 Cluster: Putative surface layer protein; n=1; Pi... 38 0.21
UniRef50_A1RI95 Cluster: Diguanylate cyclase/phosphodiesterase w... 38 0.36
UniRef50_A6LJE9 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q1PZ01 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q89UG9 Cluster: ABC transporter substrate-binding prote... 35 2.5
UniRef50_A0Z9C7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_P91388 Cluster: Putative uncharacterized protein K12D9.... 35 2.5
UniRef50_A6RNP2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q03174 Cluster: Fructan beta-fructosidase precursor; n=... 35 2.5
UniRef50_Q7UEB0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q0I1T5 Cluster: Putative uncharacterized protein hsf; n... 34 3.3
UniRef50_A6DDV9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A0UYD4 Cluster: Methionine--tRNA ligase; n=4; Clostridi... 34 3.3
UniRef50_A1ZCN2 Cluster: Beta-lactamase; n=1; Microscilla marina... 34 4.4
UniRef50_Q7RFG7 Cluster: 1 beta dynein heavy chain; n=15; Plasmo... 34 4.4
UniRef50_Q24DG1 Cluster: Putative uncharacterized protein; n=2; ... 34 4.4
UniRef50_Q00955 Cluster: Acetyl-CoA carboxylase (EC 6.4.1.2) (AC... 34 4.4
UniRef50_O25211 Cluster: Type I restriction enzyme R protein; n=... 33 5.8
UniRef50_Q1IKL6 Cluster: Putative uncharacterized protein precur... 33 5.8
UniRef50_A5FA43 Cluster: Metallophosphoesterase precursor; n=1; ... 33 5.8
UniRef50_Q6K2S9 Cluster: Putative uncharacterized protein OSJNBa... 33 5.8
UniRef50_Q83AR5 Cluster: Primosomal protein N'; n=3; Coxiella bu... 33 7.7
UniRef50_Q3ASY8 Cluster: Parallel beta-helix repeat; n=4; cellul... 33 7.7
UniRef50_A4C4R9 Cluster: Cell surface protein; n=1; Pseudoaltero... 33 7.7
UniRef50_O83842 Cluster: Flagellar hook-associated protein 2; n=... 33 7.7
>UniRef50_Q14QM2 Cluster: Putative uncharacterized protein; n=1;
Spiroplasma citri|Rep: Putative uncharacterized protein
- Spiroplasma citri
Length = 179
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = -3
Query: 683 IDDSKLAFFGAKSGIYVYDNEDGSVKKYGTVDDSVIDIVKLNGTDALYVLTEDHTVYKVT 504
I ++ + +FG GIY N+ VKK +DD+VI + ++ + +Y TED+ Y
Sbjct: 59 ISNNNIVYFGTSQGIYFLPNDATKVKKINGIDDNVIALT-VDKENNIYYATEDYQAYIYY 117
Query: 503 EEGNKKVAVDGAKD 462
G+ V ++G D
Sbjct: 118 NNGS-IVKIEGLND 130
>UniRef50_Q73MN6 Cluster: Flagellar hook-associated protein 2; n=1;
Treponema denticola|Rep: Flagellar hook-associated
protein 2 - Treponema denticola
Length = 652
Score = 42.3 bits (95), Expect = 0.013
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -3
Query: 269 TIFANGTSEKTDFKLDAKPTASAVEATLIQYYA-YNKKIYEYNILTIILGELFDELKTFL 93
TI A+ +SEK + KL KP AV+ +I+ A YN+ + NILT E+ +EL
Sbjct: 405 TIHAHESSEKQE-KLTIKPDVDAVKNAIIELVAKYNRVFAQINILTQNKPEIIEELTYLS 463
Query: 92 EEKAEDIQ 69
E + ED Q
Sbjct: 464 ESEVEDAQ 471
>UniRef50_Q11SM1 Cluster: Putative uncharacterized protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Putative
uncharacterized protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 203
Score = 40.7 bits (91), Expect = 0.038
Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = -3
Query: 755 QGLYRYKNGTATKMLDDGTSSTASIDDSKLAFFGAKSGIYVYDNEDGSVKKYGTV-DDSV 579
QG YKNG T A ID S G G YVY+ DGSVK+ GT +D
Sbjct: 93 QGCQYYKNGVPHGQCVTYTEQGA-IDKSYFLVDGKLEGPYVYNYPDGSVKRVGTFKNDDD 151
Query: 578 IDIVKLNGTDALYVLTEDHTVYKVTEEGNKKV-AVDGAKDAQQIMLD 441
+ + +D + L E + K +EG K+ +G Q+IM D
Sbjct: 152 YGLSREYFSDGILAL-EQYFNGKGVQEGEVKIYDKNGVLIKQEIMYD 197
>UniRef50_Q2NHL9 Cluster: Conserved hypothetical membrane-spanning
protein; n=1; Methanosphaera stadtmanae DSM 3091|Rep:
Conserved hypothetical membrane-spanning protein -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 412
Score = 38.7 bits (86), Expect = 0.16
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = -3
Query: 707 DGTSSTASIDDSKLAFFGAKSG-IYVYDNEDGSVKKYGTVDDSVIDIVKLNGTDALYVLT 531
D ST +ID +K+ + G+ G +Y + DGSV +DSV ++G D LY+ +
Sbjct: 140 DRIKSTPAIDSTKI-YVGSDDGYVYALNRNDGSVVWQYKTEDSVESSPVVHG-DTLYIGS 197
Query: 530 EDHTVYKVT-EEGNKKVAVDGAKDAQQIMLDYSDNVYFYGPAKKPKVVTENGVQEI 366
D VY + +G+ K D + + NVY + ++E+ E+
Sbjct: 198 NDDKVYALNINDGSVKWTYTTGDDVKSSPAISNGNVYIASEDNQVYALSEDTGLEV 253
>UniRef50_A4FZP3 Cluster: Pyrrolo-quinoline quinone; n=3;
Methanococcus|Rep: Pyrrolo-quinoline quinone -
Methanococcus maripaludis
Length = 322
Score = 38.7 bits (86), Expect = 0.16
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 5/170 (2%)
Frame = -3
Query: 638 YVYD-NEDGSVKKYGTVDDSVIDIVKLNGTDALYVLTEDHTVYKVTEEGNKKVAVDGAKD 462
Y+Y N DG+ K + ++ ++ +YV + DH +Y + +G +K KD
Sbjct: 118 YLYAINPDGTEKWRFKTNKAIYATPIVSEDGTIYVGSNDHYLYAINPDGTEKWRFK-TKD 176
Query: 461 AQQIMLDYSDNVYFYGPAKKPKVVTENGVQEILGLPENPAQVRLIKPPFVIENGVVFI-- 288
A + + Y + K + +G ++ A ++ P + E+G +++
Sbjct: 177 AITSAISIGNTGTIYFGSDKVYAINPDGTEKW----NFYAGYWIVTRPAISEDGTIYVTS 232
Query: 287 VDNDIYTIFANGTSEKTDFKLDAKPTASAV--EATLIQYYAYNKKIYEYN 144
+D +Y I +GT EK FK + + +S V I + +Y+ +Y N
Sbjct: 233 LDGYLYAINPDGT-EKWRFKTEKRIESSPVIGNTGTIYFGSYDGHLYAIN 281
>UniRef50_Q6L284 Cluster: Putative surface layer protein; n=1;
Picrophilus torridus|Rep: Putative surface layer protein
- Picrophilus torridus
Length = 885
Score = 38.3 bits (85), Expect = 0.21
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = -3
Query: 641 IYVYDNEDGSVKKYGTVDDSVIDIVKLNG-TDALYVLTEDHTVYKVTEEGNKKVAVDGAK 465
+YV + G+V T +++VI V ++G DA+ +H VY + N ++G
Sbjct: 184 LYVANYNSGNVSVINTENNNVISSVNISGYPDAMAYDQYNHAVYAAAYDSNYIYTINGTS 243
Query: 464 DAQQIMLDYSDNVY-FYGPAKK 402
+I + YS +Y Y P K
Sbjct: 244 LKNEINMYYSSPIYMIYNPYNK 265
>UniRef50_A1RI95 Cluster: Diguanylate cyclase/phosphodiesterase with
PAS/PAC and GAF sensor; n=18; Shewanella|Rep:
Diguanylate cyclase/phosphodiesterase with PAS/PAC and
GAF sensor - Shewanella sp. (strain W3-18-1)
Length = 1436
Score = 37.5 bits (83), Expect = 0.36
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -3
Query: 752 GLYRYKNGTATKMLDDGTSSTASIDDSKLAFFGAKSGIYVYDNEDGSVKKYGTVDDSVID 573
G+Y YKNG K+ ++ T S +++ L FG S ++ YD E ++ K + + +
Sbjct: 470 GMYHYKNGKLNKIHNELTYSIKEFNNNIL--FGTSSSLFKYDTETKTLSKLFSNNKGIYS 527
Query: 572 IVKLNGT 552
I+ L T
Sbjct: 528 ILILENT 534
>UniRef50_A6LJE9 Cluster: Putative uncharacterized protein; n=1;
Thermosipho melanesiensis BI429|Rep: Putative
uncharacterized protein - Thermosipho melanesiensis
BI429
Length = 209
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/74 (20%), Positives = 38/74 (51%)
Frame = -3
Query: 683 IDDSKLAFFGAKSGIYVYDNEDGSVKKYGTVDDSVIDIVKLNGTDALYVLTEDHTVYKVT 504
I+D F +K +Y+Y ++ K + + + K NG+D ++++ ++ +YK+
Sbjct: 12 INDKDKIVFISKGNLYIYSTKEKKTSKIDIIKSEHLKLFK-NGSDNIFLIDKNFDIYKID 70
Query: 503 EEGNKKVAVDGAKD 462
+ K V + +++
Sbjct: 71 VDKEKIVNLKSSEE 84
>UniRef50_Q1PZ01 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 746
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = -3
Query: 602 YGTVDDSVIDIVKLNGTDALYVLTEDH-TVYKVTEEGNKKVAVDG-AKDAQQIMLDYSDN 429
+ + + +++D+V L+ + +YV TE + +YK+ GN V D ++ + +DYS N
Sbjct: 190 FDSPETNLLDVV-LDKNNNIYVATEPNGLIYKIDNNGNAHVLYDAEEEEIHCLAIDYSGN 248
Query: 428 VY 423
+Y
Sbjct: 249 IY 250
>UniRef50_Q89UG9 Cluster: ABC transporter substrate-binding protein;
n=153; Bacteria|Rep: ABC transporter substrate-binding
protein - Bradyrhizobium japonicum
Length = 480
Score = 34.7 bits (76), Expect = 2.5
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 3/199 (1%)
Frame = -3
Query: 743 RYKNGTATKMLDDGTSSTASIDDSKLAFFGAKSGIYVYDNEDGSVKKYGTVDDSV-IDIV 567
R + G T+M T A+ S+ A +G+ + S+ DD++ + ++
Sbjct: 30 RLRQGDDTQMRTKSTHDIAA-SFSRRGVLAATAGLML---GLASISGAKAADDTIKVGVL 85
Query: 566 -KLNGTDALYVLTEDHTVYKVTEEGNKKVAVDGAKDAQQIMLDYSDNVYFYGPAKKPKVV 390
L+GT A+ T T+ + +E NKK V G K + +++D + N + K +++
Sbjct: 86 HSLSGTMAISETTLKDTILFLIDEQNKKGGVLG-KKLEAVVVDPASNWPLFA-EKARELI 143
Query: 389 TENGVQEILGLPENPAQVRLIKPPFVIENGVVFIVDNDIYTIFANG-TSEKTDFKLDAKP 213
T++ V + G + ++ + + P F N ++F Y + G SE+ F A P
Sbjct: 144 TKDKVSVVFGCWTSVSR-KSVLPVFKELNNILF------YPVQYEGEESERNVFYTGAAP 196
Query: 212 TASAVEATLIQYYAYNKKI 156
A+ A + Y ++K+
Sbjct: 197 NQQAIPA--VDYLMKDEKV 213
>UniRef50_A0Z9C7 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2080|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2080
Length = 157
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -3
Query: 710 DDGTSSTASIDDSKLAFFGAKSGIYVYDNEDGSVKKYGTVDDSVIDIVK 564
D+G S+ +I+ S FF K YV+D + G V+ G D I I+K
Sbjct: 60 DEGISTEGTINSSSHLFFEGKISAYVFDVDPGRVRIDGLPYDEYIHILK 108
>UniRef50_P91388 Cluster: Putative uncharacterized protein K12D9.12;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein K12D9.12 - Caenorhabditis
elegans
Length = 831
Score = 34.7 bits (76), Expect = 2.5
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Frame = -3
Query: 578 IDIVKLNGTDALYVLTEDHTVYKVTEEGNKKV--AVDGAKDAQQIMLDYSDNVYFYGPAK 405
+D+ K N D L V+ VT EG+ V K +I N+ F +
Sbjct: 530 VDVYKPNHMDNCDTLVNGLKVFNVTGEGDLSYLSTVKVIKGNIEIRHTTLQNLSFISKLE 589
Query: 404 KPKVVTENGVQE--ILGLPENPAQVRLIKPPFV-IEN---GVVFIVDNDIYTIFANGTSE 243
+ KV E G+ E ++ + +NP RL P F IEN G++ + +++ F E
Sbjct: 590 RIKVQNE-GIDEQLLINIHDNPNMTRLGLPNFQDIENYWSGIIRVNFENLHPDFCLTLPE 648
Query: 242 KTDFKLDAKPTASAVEATLIQYY 174
+F L + + ++A L + Y
Sbjct: 649 LNNFFLQSDLSVENLDAKLCEDY 671
>UniRef50_A6RNP2 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1468
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 191 TLIQYYAYNKKIYEYNILTIILGELFDELKTFLEEKAEDIQSIATRSRSGF 39
+L QYY++++ + I +L + L T+LE+ EDI + R+ + F
Sbjct: 358 SLYQYYSFDETFSSLQVYCAIAEQLANRLWTYLEDMPEDIHAFTQRTSTAF 408
>UniRef50_Q03174 Cluster: Fructan beta-fructosidase precursor; n=1;
Streptococcus mutans|Rep: Fructan beta-fructosidase
precursor - Streptococcus mutans
Length = 1423
Score = 34.7 bits (76), Expect = 2.5
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = -3
Query: 743 RYKNGTATKMLDDGTSSTASIDDSK-----LAFFGAKSGIYVYDNEDGSVKKYGTVDDSV 579
R NG ATK++ D + T SID S+ A F + +V N DGS+ + VD +
Sbjct: 809 RVGNGQATKVIYDLQTETLSIDRSQSGTILSAAFAKVNSQHVTKNADGSIDLHIYVDRAS 868
Query: 578 IDIVKLNGTDA 546
+++ N T A
Sbjct: 869 VEVFSKNNTVA 879
>UniRef50_Q7UEB0 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 503
Score = 34.3 bits (75), Expect = 3.3
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = -3
Query: 698 SSTASIDDSKL-AFFGAKSGIYVYDNEDGSVKKYGTVDDSVIDIVKLNGTDALYVLTEDH 522
S+T + D + + AFFG KSG+Y YD E + + + K G+ A ++T++H
Sbjct: 162 SNTPASDGTHVFAFFG-KSGVYAYDLEGNEIWSQSVGQEPSL---KGFGSAASPIVTDEH 217
Query: 521 TVYKVTEEGNKKVAVDGAKDAQQIMLDYSDNVYFYGPA-KKPKVVTENGVQEI 366
+ +E V +D K +++ +D + G P +VT NG EI
Sbjct: 218 VIVNAADESLSIVWLD-KKTGKEMHRAEADGL---GECWTTPILVTNNGQSEI 266
>UniRef50_Q0I1T5 Cluster: Putative uncharacterized protein hsf; n=1;
Haemophilus somnus 129PT|Rep: Putative uncharacterized
protein hsf - Haemophilus somnus (strain 129Pt)
(Histophilus somni (strain 129Pt))
Length = 5143
Score = 34.3 bits (75), Expect = 3.3
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Frame = -3
Query: 656 GAKSGIYVYDNEDGSVKKYGTVDDSVIDIVKLNGTDALYVLTEDHTVYKVTEEGNKKV-- 483
G SG+ + DG K + DS + +G + + + TV T++G+ K+
Sbjct: 3060 GEFSGVSEINKADG--KGALKLADSTATLESASGNSNVALKANEATVTAGTDKGSLKLEA 3117
Query: 482 ---AVDGAKDAQQIMLDYSDNVYFYGPAKKP-KVVTENG--VQEILGLPENPAQVRLIKP 321
++ AK+ + LD + G K KV T +G +I PEN + V L K
Sbjct: 3118 AKATLESAKNGSNVALDGTSATLSAGNGKGSIKVATGSGDDANKIELSPENGSAVTLAKD 3177
Query: 320 PF--VIENGVVFI-VDNDIYTIFANGTSEKTDFKL 225
V G+ + +D D +F NG K + K+
Sbjct: 3178 GTNGVKATGLSTVGLDGDNALVFTNGAGNKAELKV 3212
>UniRef50_A6DDV9 Cluster: Putative uncharacterized protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Putative
uncharacterized protein - Caminibacter mediatlanticus
TB-2
Length = 401
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -3
Query: 200 VEATLIQYYAYNKKIYEYNILTIILGELFDELKTFLEEKAEDIQSI 63
+E ++ A K+ + NI +I +L DEL+ F EEK EDIQ I
Sbjct: 175 IEQKAVEEEAQTKEEVDENI--VITNDLVDELEEFKEEKNEDIQEI 218
>UniRef50_A0UYD4 Cluster: Methionine--tRNA ligase; n=4;
Clostridium|Rep: Methionine--tRNA ligase - Clostridium
cellulolyticum H10
Length = 678
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Frame = -3
Query: 515 YKVTEEGNKKVAVDGAKD------AQQIMLDYSDNVYFYGPAKKPKVVTENGVQEILGLP 354
+ +T N+KVA D KD +Q DN+YFYGP + + G + P
Sbjct: 366 FTMTYLENQKVATDTWKDWWCSKESQVYQFIGEDNIYFYGPVEMAMFMGSQGKEVSANPP 425
Query: 353 ENPAQVRLIKPPFVIENGVVFI 288
E Q+ P + N V+F+
Sbjct: 426 EGDLQL----PKLICNNHVLFL 443
>UniRef50_A1ZCN2 Cluster: Beta-lactamase; n=1; Microscilla marina
ATCC 23134|Rep: Beta-lactamase - Microscilla marina ATCC
23134
Length = 474
Score = 33.9 bits (74), Expect = 4.4
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -3
Query: 449 MLDYSDNVYFYGPAKKPKVVT-ENGVQEILGLPENPAQVRLIKPPFVIENGVVFIVDNDI 273
+LD+SD V+ Y PA K VT EN + GLP++ ++R + F G ++ ND
Sbjct: 131 LLDFSDLVHHYIPALPYKSVTIENLLHHNSGLPDSFGELRGVTRMF----GSTKLISNDD 186
Query: 272 YTIFANGTSEKTDFK 228
+ + K FK
Sbjct: 187 IIAYLSAVRPKVKFK 201
>UniRef50_Q7RFG7 Cluster: 1 beta dynein heavy chain; n=15; Plasmodium
(Vinckeia)|Rep: 1 beta dynein heavy chain - Plasmodium
yoelii yoelii
Length = 4507
Score = 33.9 bits (74), Expect = 4.4
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -3
Query: 278 DIYTIFANGTSEKTDFKLDA---KPTASAVEATLIQYYAYNKKIYEYNILTIILGELFD 111
DI + GT E DF +D P ++ ++ L YY K+IYE IL++I+ LF+
Sbjct: 1018 DISNTYKKGT-ENNDFNIDVTVFNPMSTDIKK-LYGYYNNEKEIYEDGILSLIIKRLFE 1074
>UniRef50_Q24DG1 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 3154
Score = 33.9 bits (74), Expect = 4.4
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = -3
Query: 404 KPKVVTENGVQEILGLPENPAQ--VRLIKPPFVIENGVVFIVDNDIYTIFANGTSEKTDF 231
KP+++ G E+ P+ ++ ++LIK + + + + + + +F +KTD+
Sbjct: 2423 KPQLMVMKGWIEVQN-PKKDSENFLQLIKQQDEKKKVLGYKIGSVFFNVFTESQIKKTDY 2481
Query: 230 KLDAKPTASAVEATLIQYYAYNKKIYE 150
K D KP S + +QY+ KK+ E
Sbjct: 2482 KFDIKPFNS--DNAAVQYFVITKKMSE 2506
>UniRef50_Q00955 Cluster: Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC)
[Includes: Biotin carboxylase (EC 6.3.4.14)]; n=18;
Dikarya|Rep: Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC)
[Includes: Biotin carboxylase (EC 6.3.4.14)] -
Saccharomyces cerevisiae (Baker's yeast)
Length = 2233
Score = 33.9 bits (74), Expect = 4.4
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -3
Query: 530 EDHTVYKVTEEGNKKVAVDGAKDAQQIMLDYSDNVYFYGPAKKPKVVTENGVQEILGLPE 351
+ HT+Y E +++VD ++ D + + P K K + ENG I G P
Sbjct: 670 KSHTIYWKEEVAATRLSVDSMTTLLEVENDPTQ-LRTPSPGKLVKFLVENGEHIIKGQPY 728
Query: 350 NPAQVRLIKPPFVI-ENGVVFIVDNDIYTIFA 258
+V ++ P V ENG+V ++ TI A
Sbjct: 729 AEIEVMKMQMPLVSQENGIVQLLKQPGSTIVA 760
>UniRef50_O25211 Cluster: Type I restriction enzyme R protein; n=7;
Helicobacter|Rep: Type I restriction enzyme R protein -
Helicobacter pylori (Campylobacter pylori)
Length = 1055
Score = 33.5 bits (73), Expect = 5.8
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = -1
Query: 550 MLYTF*LKTTPFTKSPKKAIRKSLLTALKMPNRLCLITPTTFTF 419
+L F LK T KSPK SLLT+ P RLC I +F
Sbjct: 232 VLNEFNLKDTDTPKSPKDTPTNSLLTSFCSPKRLCFILKYGISF 275
>UniRef50_Q1IKL6 Cluster: Putative uncharacterized protein
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Putative uncharacterized protein precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 1189
Score = 33.5 bits (73), Expect = 5.8
Identities = 20/81 (24%), Positives = 33/81 (40%)
Frame = -3
Query: 701 TSSTASIDDSKLAFFGAKSGIYVYDNEDGSVKKYGTVDDSVIDIVKLNGTDALYVLTEDH 522
T+ T +D S +A + +YV +N V V + + G DA+ V +
Sbjct: 410 TAVTTGVDPSAVAVNPVTNKVYVANNYSNDVTVIDGVTNDTTTLQAGLGPDAVAVNPATN 469
Query: 521 TVYKVTEEGNKKVAVDGAKDA 459
T+Y N +DGA +
Sbjct: 470 TIYVANRTSNNVTIIDGASSS 490
>UniRef50_A5FA43 Cluster: Metallophosphoesterase precursor; n=1;
Flavobacterium johnsoniae UW101|Rep:
Metallophosphoesterase precursor - Flavobacterium
johnsoniae UW101
Length = 1243
Score = 33.5 bits (73), Expect = 5.8
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Frame = -3
Query: 626 NEDGSVKKYGTVDDSVID-IVKLNGTDALYVLTEDHTVYKVTEEGNKKVAVDGAK-DAQQ 453
N ++KY V+ V + GTD +H K E +V DG + +
Sbjct: 747 NRKKDLQKYAARYSDVLSRTVMIAGTDKKDKFVLNHNAKKSIEVQVYRVKKDGDELQYSK 806
Query: 452 IMLDY-SDNVYFYGPAKKPKVVTENGVQEILGLPENPAQVRLIKPPFVIENGVVFIVDND 276
+ D + N++ YG + +N V E+ G ++ +VRLI +N + ++N
Sbjct: 807 TLTDAKTKNLWIYG-------LDDNDVFEVKGDQKSKIKVRLIGG----QNNDTYNIENG 855
Query: 275 IYTIFANGTSEKTDFKLDAKPTASAVEATLIQYYAYNKKIYEYNILT 135
I + S++ + LD+K + + Y Y K +YN+++
Sbjct: 856 RKVIVYDFKSKENTYNLDSKTQTQLTDDYDVNLYNYEKP--KYNVIS 900
>UniRef50_Q6K2S9 Cluster: Putative uncharacterized protein
OSJNBa0060K08.4; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0060K08.4 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 33.5 bits (73), Expect = 5.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 393 CDRKWGAGNPWPSRKPSSGEANQTTVCHRK 304
C R W + WP PSSGE VC R+
Sbjct: 92 CRRIWRLASYWPDPAPSSGEGGHLPVCQRE 121
>UniRef50_Q83AR5 Cluster: Primosomal protein N'; n=3; Coxiella
burnetii|Rep: Primosomal protein N' - Coxiella burnetii
Length = 662
Score = 33.1 bits (72), Expect = 7.7
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -3
Query: 200 VEATLIQYYAYNKKIYEYNILTIILG---ELFDELKTFLEEKAEDIQSIATRS 51
+ A+L++ Y + Y Y I IILG LF + KT + EK E++ A S
Sbjct: 78 IPASLLKLYCWASDYYHYPIGEIILGSLPRLFRQGKTIISEKIEELNQAAPPS 130
>UniRef50_Q3ASY8 Cluster: Parallel beta-helix repeat; n=4; cellular
organisms|Rep: Parallel beta-helix repeat - Chlorobium
chlorochromatii (strain CaD3)
Length = 36805
Score = 33.1 bits (72), Expect = 7.7
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = -3
Query: 695 STASIDDSKLAFFGAKSGIYVYDNEDGSVKKYGTVDDSVIDIVKLNGTDALYVLTEDHTV 516
+T + +L+F G + N S+ + G VDD V+D V TD L + T + T
Sbjct: 7816 TTLEANAEELSFVGIEGLEASAKNITISINQAGKVDDKVVDYVGTGATD-LTIKTGNTTD 7874
Query: 515 YKVTEEGNK 489
K+++EG++
Sbjct: 7875 LKLSQEGSE 7883
>UniRef50_A4C4R9 Cluster: Cell surface protein; n=1; Pseudoalteromonas
tunicata D2|Rep: Cell surface protein - Pseudoalteromonas
tunicata D2
Length = 1399
Score = 33.1 bits (72), Expect = 7.7
Identities = 38/189 (20%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Frame = -3
Query: 698 SSTASIDDSKLAFFGAKSG-IYVYDNEDGSVKKYGTVDDSVIDIVKLNGTDALYVLTEDH 522
+S+ +ID S FG+ +Y D+ + ++ T + + ++ TD +Y+ ++D
Sbjct: 1054 NSSPAIDSSGNVIFGSDDNKLYALDSSGNKLWEFATANKITASPL-IDDTDNIYIGSQDK 1112
Query: 521 TVYKVTEEGNKKVAVDGAKD-AQQIMLDYSDNVYFYGPAKKPKVVTENGVQEILGLPENP 345
YK+ G + A + L SDN+ F + V + P
Sbjct: 1113 KFYKIDNTGTQLWQQTTANPILVEAALLASDNLLFVSDSTINVVDSSGSAVWNFTHPSTN 1172
Query: 344 AQVRLIKPPFVIENGVVFIVDNDIYTI-FANGTSEKTDFKLDAKPTASA--VEATLIQYY 174
+ I +N ++ D +Y ++NG+S D +L T S+ + T + +
Sbjct: 1173 SYSAAISSS--SDNVLIISSDKYLYEFSYSNGSSGPQDSELTPAITNSSPIADNTYVYFG 1230
Query: 173 AYNKKIYEY 147
A + ++ Y
Sbjct: 1231 ASDSNVHTY 1239
>UniRef50_O83842 Cluster: Flagellar hook-associated protein 2; n=1;
Treponema pallidum|Rep: Flagellar hook-associated
protein 2 - Treponema pallidum
Length = 722
Score = 33.1 bits (72), Expect = 7.7
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = -3
Query: 269 TIFANGTSEKTDFKLDAKPTASAVEATLIQYYA-YNKKIYEYNILTIILGELFDELKTFL 93
T+ + +EKT+ L P +A++ +I++ A YN+ + E NI+T + DEL
Sbjct: 476 TLSLHERTEKTE-TLSVTPDVNAMKNAIIEFVAKYNRLMAEINIVTSNKSAIIDELAYLT 534
Query: 92 -EEKAEDIQSIAT 57
EEK ++ + + +
Sbjct: 535 PEEKKKETEQLGS 547
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,985,736
Number of Sequences: 1657284
Number of extensions: 13526126
Number of successful extensions: 46166
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46107
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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