Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f09r
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    28   0.093
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   8.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.1  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 279 VIYNKNNTVFYDKRWFD*PHLSWVFGKAKDFLHP 380
           V+ N N+TV+YD R    P+L +V  +A DF  P
Sbjct: 219 VLPNVNSTVYYDPRALS-PNLEFVVLEAFDFYTP 251


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 131 ILGELFDELKTFLEEKAEDI 72
           ++ E  D+L+ FLE+  E+I
Sbjct: 145 LMQECVDDLRRFLEDHTEEI 164


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 694  RPHPSTTLNWRSSAPNPVFTFTTTKTAAL 608
            RP PSTT +W++       T  TT  + L
Sbjct: 1175 RP-PSTTNHWQTKTTTSTTTRPTTTVSQL 1202


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -2

Query: 267 YICERYK*EN*FQTGRKTNSLGRRSHSNPILRLQ*KDLRIQHPDYY 130
           Y C     EN  +      S+ R        R+  K LR+  PDYY
Sbjct: 564 YACATMWHENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYY 609


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -2

Query: 267 YICERYK*EN*FQTGRKTNSLGRRSHSNPILRLQ*KDLRIQHPDYY 130
           Y C     EN  +      S+ R        R+  K LR+  PDYY
Sbjct: 564 YACATMWHENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYY 609


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -2

Query: 267 YICERYK*EN*FQTGRKTNSLGRRSHSNPILRLQ*KDLRIQHPDYY 130
           Y C     EN  +      S+ R        R+  K LR+  PDYY
Sbjct: 564 YACATMWHENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYY 609


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -2

Query: 267 YICERYK*EN*FQTGRKTNSLGRRSHSNPILRLQ*KDLRIQHPDYY 130
           Y C     EN  +      S+ R        R+  K LR+  PDYY
Sbjct: 564 YACATMWHENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYY 609


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 69  LYIFSLLFQKCFQFIK*LSQYNSQDVVFVNLFIVS 173
           LY   L+  K  +  + LS+ N+Q V   +LFIV+
Sbjct: 23  LYGEYLMLDKILEAQRLLSEQNNQPVHDEHLFIVT 57


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 69  LYIFSLLFQKCFQFIK*LSQYNSQDVVFVNLFIVS 173
           LY   L+  K  +  + LS+ N+Q V   +LFIV+
Sbjct: 23  LYGEYLMLDKILEAQRLLSEQNNQPVHDEHLFIVT 57


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 69  LYIFSLLFQKCFQFIK*LSQYNSQDVVFVNLFIVS 173
           LY   L+  K  +  + LS+ N+Q V   +LFIV+
Sbjct: 23  LYGEYLMLDKILEAQRLLSEQNNQPVHDEHLFIVT 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,971
Number of Sequences: 336
Number of extensions: 3471
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)