Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f09r
         (763 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-433|AAN13238.1|  590|Drosophila melanogaster CG31556-PA...    32   0.98 
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    31   1.7  
BT010298-1|AAQ23616.1|  854|Drosophila melanogaster LD10043p pro...    29   5.2  
AE014296-446|AAF47640.1|  854|Drosophila melanogaster CG9004-PA ...    29   5.2  
AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA ...    29   9.2  

>AE014297-433|AAN13238.1|  590|Drosophila melanogaster CG31556-PA
           protein.
          Length = 590

 Score = 31.9 bits (69), Expect = 0.98
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
 Frame = -3

Query: 731 GTATKMLDDGTSSTASIDDSKLAFFGAKSGIYVYDNEDGSVKKYG----TVDDSVIDIVK 564
           G    ++ D  S+   +DDS +        + V D+    V   G     VDDSV+D+V+
Sbjct: 324 GDCVVVVVDVGSAVDVVDDSVVVVVEGGIAVDVVDDAVVVVVDVGIAVDVVDDSVVDVVE 383

Query: 563 LNGTDALYVLTEDHTVYKVTEEGNKKVAVDGAKDAQQIMLD 441
           + G D   V   D +V  V E+G   +AVD   DA  +++D
Sbjct: 384 V-GIDVDVV---DDSVVVVVEDG---IAVDVVDDAVVVVVD 417


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
           protein.
          Length = 1976

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -1

Query: 733 TVRPRKCLMTVQARPHPSTTLNWRSSAPNPVFTFTTTKTAALRNT 599
           T  P +  +T  + P P+TT + ++S      T+TTT T A   T
Sbjct: 415 TEPPAESTVTTTSEPEPTTTSSTQASTTTSTETYTTTSTEAPTTT 459


>BT010298-1|AAQ23616.1|  854|Drosophila melanogaster LD10043p
           protein.
          Length = 854

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 188 LIQYYAYNKKIYEYNILTIILGELFDEL 105
           L+  Y Y  KIYE N+L  ++G+L D+L
Sbjct: 461 LVLCYMYLFKIYELNLLMELIGKLSDQL 488


>AE014296-446|AAF47640.1|  854|Drosophila melanogaster CG9004-PA
           protein.
          Length = 854

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 188 LIQYYAYNKKIYEYNILTIILGELFDEL 105
           L+  Y Y  KIYE N+L  ++G+L D+L
Sbjct: 461 LVLCYMYLFKIYELNLLMELIGKLSDQL 488


>AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA
           protein.
          Length = 746

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 739 TKTVRPRKCLMTVQARPHPSTTLNWRSSAPNPVFTFTTT 623
           T T RP   L T  ++PH + +    + A  PV T TTT
Sbjct: 260 TTTQRPTPPLRTTTSKPHKTHSSRRPAPAKKPVSTTTTT 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,846,089
Number of Sequences: 53049
Number of extensions: 608028
Number of successful extensions: 1832
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1832
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)