Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f09f
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.8  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.8  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 22  RYKDEIYAITRRRFPGGQFCERRSD 96
           +Y D + + T R++P   F  R+SD
Sbjct: 347 KYLDMVISETLRKYPLAPFLNRKSD 371


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 360  RPHPSTTLNWRSSAPNPVFTFTTTKTAAL 446
            RP PSTT +W++       T  TT  + L
Sbjct: 1175 RP-PSTTNHWQTKTTTSTTTRPTTTVSQL 1202


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 16/67 (23%), Positives = 24/67 (35%)
 Frame = +3

Query: 264 RPTSIMARLRNTRAFIDTKTVRPRKCLMTVQARPHPSTTLNWRSSAPNPVFTFTTTKTAA 443
           RP +   R         T +   R     +Q R H   T    ++   P  T  +++   
Sbjct: 245 RPLARTCRDNRLLVLAGTSSPSNRFTRHLIQRRTHTRHTTTSHNTRGTPRTTPASSRCGQ 304

Query: 444 LRNTERS 464
           L NTE S
Sbjct: 305 LFNTEES 311


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 351 VQARPHPSTTLNW 389
           +Q+ PHP T  +W
Sbjct: 71  IQSVPHPETEKDW 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,538
Number of Sequences: 336
Number of extensions: 2299
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)