Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f09f
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006627-9|AAK85464.1|  367|Caenorhabditis elegans Hypothetical ...    33   0.18 
U00031-1|AAZ82851.1|  330|Caenorhabditis elegans Hypothetical pr...    31   0.94 
AC024831-12|AAW57824.1|  356|Caenorhabditis elegans Serpentine r...    29   2.9  
AC087082-1|AAG37982.2|  157|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z81520-4|CAE17808.1|  181|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC006712-11|AAK39327.2|  308|Caenorhabditis elegans Hypothetical...    28   5.0  
Z81050-1|CAB02850.1|  582|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>AC006627-9|AAK85464.1|  367|Caenorhabditis elegans Hypothetical
           protein E01A2.7 protein.
          Length = 367

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
 Frame = +2

Query: 296 YKGLYRYKNGTATKMLDDGTSSTASI--DDSKLAFFGAKS----GIYVYDNEDGSVKKYG 457
           YKG   Y NG  ++ L +   +   I   D K  F    +    G+Y ++ +DG ++K  
Sbjct: 199 YKGGLVYYNGKKSQFLMENNIANGIILSRDQKTLFVSHINQETIGVYTWNQKDGEIQK-- 256

Query: 458 TVDDSVIDIVKLNGTDALYVLTEDH 532
                + +I  L G D  YV T+DH
Sbjct: 257 -----ISEIETLTGCDNFYVDTQDH 276


>U00031-1|AAZ82851.1|  330|Caenorhabditis elegans Hypothetical
           protein B0361.4 protein.
          Length = 330

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 17/59 (28%), Positives = 32/59 (54%)
 Frame = -2

Query: 207 IEFNGTVILIMSFWLLYTDNSSGKKSVVMMIWSSSLVVGAPLTKLAARKATTSNSVYFI 31
           + F G   L++ FW  +T ++S +   + ++W+S L + +PL  L  +    SN + FI
Sbjct: 136 VSFRGISELLIIFWFSHTPDNSVEHMHLYVLWASDL-ISSPLL-LMQQLQNVSNLMEFI 192


>AC024831-12|AAW57824.1|  356|Caenorhabditis elegans Serpentine
           receptor, class t protein23 protein.
          Length = 356

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 370 GCGRACTVIKHFRGRTVFVSIKALVFLNLAI 278
           G  R C V +H R RT+F+  K  +FL +A+
Sbjct: 137 GINRCCDVNQHLRIRTIFIGRK--IFLTIAV 165


>AC087082-1|AAG37982.2|  157|Caenorhabditis elegans Hypothetical
           protein Y92H12BM.1 protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +2

Query: 395 FGAKSGIYVYDNEDGSVKKYGTVDDSVIDIVKLNGTDALYVLTEDHTVYKV 547
           F +K+G Y Y N   SV K+       IDI+ L     L   TE   V K+
Sbjct: 12  FDSKTGRYYYYNASSSVTKWQKPTGIDIDIIPLAKLQTLKENTEGGAVSKI 62


>Z81520-4|CAE17808.1|  181|Caenorhabditis elegans Hypothetical
           protein F31B9.4 protein.
          Length = 181

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 321 TVRPRKCLMTVQARPHPSTTLNWRSSAPNPVFTFTTTKTAALRNT 455
           ++  R  ++T   RP+ STT    S APN   T TTT  A   NT
Sbjct: 11  SIPSRDPVITTTIRPN-STTTTTTSPAPNITTTTTTTTIAPPTNT 54


>AC006712-11|AAK39327.2|  308|Caenorhabditis elegans Hypothetical
           protein Y119C1B.10 protein.
          Length = 308

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +2

Query: 110 DQIIITTDFFPDELSVYSSQNDIISITVPL 199
           DQ+ +    FPD++++Y+  N+I+   + L
Sbjct: 199 DQLELLKSVFPDDVTIYTDSNNIVHYQIKL 228


>Z81050-1|CAB02850.1|  582|Caenorhabditis elegans Hypothetical
           protein C50B6.2 protein.
          Length = 582

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 20/74 (27%), Positives = 30/74 (40%)
 Frame = +2

Query: 344 DDGTSSTASIDDSKLAFFGAKSGIYVYDNEDGSVKKYGTVDDSVIDIVKLNGTDALYVLT 523
           +D  +     D  KLA+   ++   + D +  S+    TVD   I + KLN  D L  L 
Sbjct: 327 EDDEAEDDEADSMKLAWELLETSRCIADKKAASLAAESTVDGEAIKMWKLNLADVLTSLG 386

Query: 524 EDHTVYKVTEEGNK 565
           E        E+  K
Sbjct: 387 EHGIADSKYEQAQK 400


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,395,040
Number of Sequences: 27780
Number of extensions: 225779
Number of successful extensions: 735
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)