Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f05f
(645 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VTF9 Cluster: Ubiquitin fusion degradation protein 1 ... 283 3e-75
UniRef50_P70362 Cluster: Ubiquitin fusion degradation protein 1 ... 270 2e-71
UniRef50_Q5DCI7 Cluster: SJCHGC05907 protein; n=5; Bilateria|Rep... 248 1e-64
UniRef50_A1CS40 Cluster: Ubiquitin fusion degradation protein Uf... 215 8e-55
UniRef50_Q6NLS0 Cluster: At2g29070; n=26; Eukaryota|Rep: At2g290... 194 2e-48
UniRef50_O42915 Cluster: Ubiquitin fusion degradation protein 1;... 192 5e-48
UniRef50_A4S295 Cluster: Predicted protein; n=2; Ostreococcus|Re... 190 2e-47
UniRef50_P53044 Cluster: Ubiquitin fusion degradation protein 1;... 190 2e-47
UniRef50_A7TF67 Cluster: Putative uncharacterized protein; n=1; ... 188 1e-46
UniRef50_Q6CUT2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 186 3e-46
UniRef50_Q5CQD1 Cluster: Ubiquitin fusion degradation protein (U... 182 9e-45
UniRef50_Q92890 Cluster: Ubiquitin fusion degradation protein 1 ... 175 6e-43
UniRef50_Q55BK0 Cluster: Putative uncharacterized protein; n=1; ... 174 2e-42
UniRef50_A5K150 Cluster: Ubiquitin fusion degradation protein, p... 165 8e-40
UniRef50_Q19584 Cluster: Ubiquitin fusion degradation protein 1 ... 155 1e-36
UniRef50_Q5K888 Cluster: Ubiquitin fusion-degradation 1-like pro... 150 2e-35
UniRef50_Q5ZBL5 Cluster: Putative ubiquitin fusion degradation p... 142 7e-33
UniRef50_Q4UEN1 Cluster: Ubiquitin fusion degradation protein (U... 136 6e-31
UniRef50_A5BYW8 Cluster: Putative uncharacterized protein; n=1; ... 134 2e-30
UniRef50_Q22Y58 Cluster: Ubiquitin fusion degradation protein UF... 122 7e-27
UniRef50_Q9SEV9 Cluster: Ubiquitin fusion degradation protein; n... 117 3e-25
UniRef50_Q8SR25 Cluster: UBIQUITIN FUSION DEGRADATION PROTEIN 1;... 107 2e-22
UniRef50_A0DT94 Cluster: Chromosome undetermined scaffold_62, wh... 107 3e-22
UniRef50_Q38AI5 Cluster: Ubiquitin fusion degradation protein, p... 103 3e-21
UniRef50_A2ECS3 Cluster: Ubiquitin fusion degradation protein, p... 100 3e-20
UniRef50_Q7R480 Cluster: GLP_480_98798_99739; n=1; Giardia lambl... 100 6e-20
UniRef50_O23395 Cluster: UFD1 like protein; n=8; Magnoliophyta|R... 86 8e-16
UniRef50_Q4Q0A8 Cluster: Ubiquitin fusion degradation protein, p... 85 1e-15
UniRef50_A2G735 Cluster: Ubiquitin fusion degradation protein, p... 85 2e-15
UniRef50_A0CQS3 Cluster: Chromosome undetermined scaffold_24, wh... 81 3e-14
UniRef50_A2ETH3 Cluster: Putative uncharacterized protein; n=1; ... 75 1e-12
UniRef50_UPI00004997F3 Cluster: ubiquitin fusion degradation pro... 73 6e-12
UniRef50_Q4UIX9 Cluster: Ubiquitin-fusion degradation pathway co... 71 2e-11
UniRef50_A3LY47 Cluster: Predicted protein; n=2; Saccharomycetac... 63 5e-09
UniRef50_A7ASK6 Cluster: Ubiquitin fusion degradation protein UF... 62 1e-08
UniRef50_UPI000023E8B2 Cluster: hypothetical protein FG08129.1; ... 51 2e-05
UniRef50_Q7R828 Cluster: Similar to ubiquitin fusion degradation... 51 3e-05
UniRef50_A4RPN9 Cluster: Putative uncharacterized protein; n=1; ... 44 7e-05
UniRef50_Q01D99 Cluster: Ubiquitin fusion-degradation protein; n... 45 0.002
UniRef50_Q5CTG1 Cluster: Ubiquitin fusion degradation (UFD1) fam... 44 0.002
UniRef50_A6SCN4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.003
UniRef50_Q1DMD1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.013
UniRef50_A6LHX9 Cluster: Sensor protein; n=2; Parabacteroides|Re... 36 0.63
UniRef50_A4RI58 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_P75356 Cluster: Putative ABC transporter ATP-binding pr... 34 3.4
UniRef50_A6AMN1 Cluster: GntR-family transcriptional regulator; ... 33 4.5
>UniRef50_Q9VTF9 Cluster: Ubiquitin fusion degradation protein 1
homolog; n=11; Eumetazoa|Rep: Ubiquitin fusion
degradation protein 1 homolog - Drosophila melanogaster
(Fruit fly)
Length = 316
Score = 283 bits (693), Expect = 3e-75
Identities = 133/173 (76%), Positives = 146/173 (84%), Gaps = 1/173 (0%)
Frame = +2
Query: 128 MFQF-GFNMFHEISRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 304
MF F GFNM R F+ Y+C+SVSMLPGNER DVE+GGKIIMPPSAL+ LTRLN+EY
Sbjct: 1 MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60
Query: 305 PMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFS 484
PM+FKLTN K R +H GVLEFVADEG+ YLPHWMM NL+L EG ++ IESVSLPVATFS
Sbjct: 61 PMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFS 120
Query: 485 KFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
KFQP S DFLDITNPKAVLEN LRNF+CLT GDVIAIKYN KVYELCVLETKP
Sbjct: 121 KFQPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKP 173
>UniRef50_P70362 Cluster: Ubiquitin fusion degradation protein 1
homolog; n=26; Euteleostomi|Rep: Ubiquitin fusion
degradation protein 1 homolog - Mus musculus (Mouse)
Length = 307
Score = 270 bits (662), Expect = 2e-71
Identities = 130/175 (74%), Positives = 147/175 (84%), Gaps = 6/175 (3%)
Frame = +2
Query: 137 FGFNMF-HEISRPF----NMTYRCYSVSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 298
F FNMF H I R F + YRC+SVSML G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 299 EYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVAT 478
YPM+FKLTNK S R+THCGVLEFVADEG YLPHWMM NL+LEEG L+Q+ESV+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVAT 121
Query: 479 FSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
+SKFQP S DFLDITNPKAVLEN LRNF+C+TTGDVIAI YN K+YEL V+ETKP
Sbjct: 122 YSKFQPQSPDFLDITNPKAVLENALRNFACMTTGDVIAINYNEKIYELRVMETKP 176
>UniRef50_Q5DCI7 Cluster: SJCHGC05907 protein; n=5; Bilateria|Rep:
SJCHGC05907 protein - Schistosoma japonicum (Blood
fluke)
Length = 305
Score = 248 bits (606), Expect = 1e-64
Identities = 111/166 (66%), Positives = 137/166 (82%), Gaps = 2/166 (1%)
Frame = +2
Query: 152 FHEI--SRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLT 325
FH I S PF +YRCY VS L N R VE+GGKIIMPPSAL+ LTRLN++YPM+FKLT
Sbjct: 4 FHRIDNSSPFTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLT 63
Query: 326 NKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSE 505
N+++ R THCGVLEFVADEGR+Y+P+WM+ NL LEEG L+ + + +LPVA+F++FQP S
Sbjct: 64 NQQANRTTHCGVLEFVADEGRIYVPYWMLKNLDLEEGGLVSVVNAALPVASFARFQPQST 123
Query: 506 DFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
DFLDI+NPKAVLEN LR+F+CLT GD+IAI YN ++YEL VLETKP
Sbjct: 124 DFLDISNPKAVLENALRDFACLTVGDIIAISYNERIYELKVLETKP 169
>UniRef50_A1CS40 Cluster: Ubiquitin fusion degradation protein Ufd1,
putative; n=16; Pezizomycotina|Rep: Ubiquitin fusion
degradation protein Ufd1, putative - Aspergillus
clavatus
Length = 397
Score = 215 bits (525), Expect = 8e-55
Identities = 96/160 (60%), Positives = 121/160 (75%)
Frame = +2
Query: 164 SRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKR 343
+R F+ YRCY V+MLPG ER++V GGK+IMPPSAL++LTRL+I YPM+F+L N +R
Sbjct: 27 TRRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELVNGSKER 86
Query: 344 LTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDIT 523
+TH GVLEF+A+EG++YLP W+M L LE G L+Q++S LP F K Q S FLDI+
Sbjct: 87 MTHAGVLEFIAEEGKIYLPFWLMQTLQLEPGDLVQVKSTDLPSGRFIKLQAQSTSFLDIS 146
Query: 524 NPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
+PKAVLEN RNFSCLT GDV YN +VYE+ VLETKP
Sbjct: 147 DPKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKP 186
>UniRef50_Q6NLS0 Cluster: At2g29070; n=26; Eukaryota|Rep: At2g29070
- Arabidopsis thaliana (Mouse-ear cress)
Length = 312
Score = 194 bits (472), Expect = 2e-48
Identities = 86/157 (54%), Positives = 120/157 (76%)
Frame = +2
Query: 173 FNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTH 352
F YRCY V+ + ++ +E+G KIIMPPSAL++L L+IEYPM+F+L+N ++ +H
Sbjct: 8 FEQCYRCYPVTFI---DKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSH 64
Query: 353 CGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPK 532
CGVLEF ADEG VYLP+WMM N+ LEEG ++Q++++SL T+ K QP ++DFLDI+NPK
Sbjct: 65 CGVLEFTADEGLVYLPYWMMQNMSLEEGDVMQVKNISLVKGTYIKLQPHTQDFLDISNPK 124
Query: 533 AVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
A+LE LR++SCLTTGD I + YN+K Y + V+E KP
Sbjct: 125 AILETTLRSYSCLTTGDTIMVPYNNKQYYINVVEAKP 161
>UniRef50_O42915 Cluster: Ubiquitin fusion degradation protein 1;
n=1; Schizosaccharomyces pombe|Rep: Ubiquitin fusion
degradation protein 1 - Schizosaccharomyces pombe
(Fission yeast)
Length = 342
Score = 192 bits (469), Expect = 5e-48
Identities = 85/165 (51%), Positives = 122/165 (73%), Gaps = 1/165 (0%)
Frame = +2
Query: 152 FHE-ISRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTN 328
FH +++ F+ YRCY V+M+PG ER +V GGK+I+PPSALE+L+RLN+ YPM+F N
Sbjct: 24 FHNNVNQRFDTRYRCYPVAMIPGEERPNVNYGGKVILPPSALEKLSRLNVSYPMLFDFEN 83
Query: 329 KKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSED 508
+ +++ TH GVLEF+A+EGRVYLP+WMM L LE G L+++ + + ++ K QP S +
Sbjct: 84 EAAEKKTHGGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSVN 143
Query: 509 FLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
FLDIT+ +AVLEN LRNFS LT D+ I YN +VY++ V++ +P
Sbjct: 144 FLDITDHRAVLENALRNFSTLTKSDIFEILYNDQVYQIKVIDVQP 188
>UniRef50_A4S295 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 355
Score = 190 bits (464), Expect = 2e-47
Identities = 90/168 (53%), Positives = 119/168 (70%), Gaps = 1/168 (0%)
Frame = +2
Query: 143 FNMFHEISRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIE-YPMIFK 319
F+ F FN +YR Y VS + +R +E G K+I+PPSALE+LTR+ I+ YPM+F+
Sbjct: 2 FSRFGVGQARFNASYRAYPVSFI---DRPQLELGDKVILPPSALERLTRMQIDDYPMLFE 58
Query: 320 LTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPL 499
+TN K + THCGVLEFVADEG VYLP+WMM NL+L EG +++ +LP T+ K QP
Sbjct: 59 VTNAKEGKSTHCGVLEFVADEGVVYLPYWMMQNLLLGEGDIVKFSYSTLPKGTYVKLQPQ 118
Query: 500 SEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
++DFLDI+NPKAVLE LR ++CLT GD I YN+K Y + V+E KP
Sbjct: 119 TQDFLDISNPKAVLETTLRQYTCLTVGDTFVIHYNNKQYHIDVIEAKP 166
>UniRef50_P53044 Cluster: Ubiquitin fusion degradation protein 1;
n=10; Saccharomycetales|Rep: Ubiquitin fusion
degradation protein 1 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 361
Score = 190 bits (464), Expect = 2e-47
Identities = 90/169 (53%), Positives = 119/169 (70%), Gaps = 1/169 (0%)
Frame = +2
Query: 140 GFNMFHEISRPFNMTYRCYSVSMLPGNERQD-VERGGKIIMPPSALEQLTRLNIEYPMIF 316
G N F + + F +RCY ++M+ R+D GGKI +PPSAL +L+ LNI YPM+F
Sbjct: 10 GGNGFVNMPQTFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLF 69
Query: 317 KLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQP 496
KLT ++ R+TH GVLEF+A+EGRVYLP WMM L ++ G+L+QI S +P+ F K +P
Sbjct: 70 KLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEP 129
Query: 497 LSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
S DFLDI++PKAVLEN LRNFS LT DVI I YN K +++ +LE KP
Sbjct: 130 QSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKP 178
>UniRef50_A7TF67 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 352
Score = 188 bits (457), Expect = 1e-46
Identities = 84/167 (50%), Positives = 119/167 (71%), Gaps = 1/167 (0%)
Frame = +2
Query: 146 NMFHEISRPFNMTYRCYSVSMLPGNERQD-VERGGKIIMPPSALEQLTRLNIEYPMIFKL 322
N F I + F +RCY +SM+ R+D GGKI +PPSAL +LT LNI YPM+F+L
Sbjct: 11 NQFASIPQKFESFFRCYPISMMNDRIRKDDANYGGKIFLPPSALNKLTMLNIRYPMLFEL 70
Query: 323 TNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLS 502
++ ++TH GVLEF+A+EGR YLP+WMM L ++ G+L++I ++ +P+ ++ +P S
Sbjct: 71 MANENGKITHGGVLEFIAEEGRTYLPNWMMETLDVKPGSLLKISTIDIPLGSYVNIEPQS 130
Query: 503 EDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
DFLDI++PKAVLEN LRNFS LT D+I I YN+K+Y + +LE KP
Sbjct: 131 VDFLDISDPKAVLENVLRNFSTLTINDIIEISYNNKIYRIKILEVKP 177
>UniRef50_Q6CUT2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 345
Score = 186 bits (454), Expect = 3e-46
Identities = 86/167 (51%), Positives = 119/167 (71%), Gaps = 1/167 (0%)
Frame = +2
Query: 146 NMFHEISRPFNMTYRCYSVSMLPGNERQD-VERGGKIIMPPSALEQLTRLNIEYPMIFKL 322
N + I + +RCY ++M+ N R+D GGKI +PPSAL +LT LN+ YPM+F+L
Sbjct: 10 NAYANIPQRLEEFFRCYPIAMMNDNIRKDDANYGGKIFLPPSALNKLTLLNVRYPMLFEL 69
Query: 323 TNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLS 502
+++S ++TH GVLEF+A+EGRVYLP WMM L ++ G+++QI S +P+ F K +P S
Sbjct: 70 KSQESGKVTHGGVLEFIAEEGRVYLPQWMMETLEIQPGSVLQICSTDVPLGQFVKLEPQS 129
Query: 503 EDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
DFLDI++PKAVLE LRNFS LT D+I I YN+KVY + +LE KP
Sbjct: 130 VDFLDISDPKAVLERVLRNFSTLTIDDIIEISYNNKVYRIRILEVKP 176
>UniRef50_Q5CQD1 Cluster: Ubiquitin fusion degradation protein
(UFD1); double Psi beta barrel fold; n=2;
Cryptosporidium|Rep: Ubiquitin fusion degradation
protein (UFD1); double Psi beta barrel fold -
Cryptosporidium parvum Iowa II
Length = 322
Score = 182 bits (442), Expect = 9e-45
Identities = 89/168 (52%), Positives = 111/168 (66%)
Frame = +2
Query: 140 GFNMFHEISRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFK 319
G N S F Y CY VS R ++E G KI++PPSAL QL R NI +PM+F+
Sbjct: 33 GSNFRSSSSNLFINEYSCYPVSFAG---RDELEGGNKILLPPSALNQLARRNITWPMLFQ 89
Query: 320 LTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPL 499
++N + TH GVLEFVA+EG Y+P+WMM NL L+EG + I + SL T+ KF PL
Sbjct: 90 ISNPAKNKFTHSGVLEFVAEEGTCYMPYWMMQNLELQEGDITSIMNTSLSKGTYVKFMPL 149
Query: 500 SEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
S DFLDI+NPKAVLE LRNF+ LT GD+I I YN+ Y + VLETKP
Sbjct: 150 SMDFLDISNPKAVLETTLRNFATLTVGDIITIHYNNNSYRINVLETKP 197
>UniRef50_Q92890 Cluster: Ubiquitin fusion degradation protein 1
homolog; n=1; Homo sapiens|Rep: Ubiquitin fusion
degradation protein 1 homolog - Homo sapiens (Human)
Length = 343
Score = 175 bits (427), Expect = 6e-43
Identities = 86/123 (69%), Positives = 100/123 (81%), Gaps = 6/123 (4%)
Frame = +2
Query: 137 FGFNMF-HEISRPF----NMTYRCYSVSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 298
F FNMF H I R F + YRC+SVSML G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61
Query: 299 EYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVAT 478
YPM+FKLTNK S R+THCGVLEFVADEG YLPHWMM NL+LEE L+Q+E+V+L VAT
Sbjct: 62 TYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEDGLVQLETVNLQVAT 121
Query: 479 FSK 487
+SK
Sbjct: 122 YSK 124
Score = 149 bits (360), Expect = 7e-35
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 392 YLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCL 571
YLPHWMM NL+LEEG L+Q+ESV+L VAT+SKFQP S DFLDITNPKAVLEN LRNF+CL
Sbjct: 129 YLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACL 188
Query: 572 TTGDVIAIKYNSKVYELCVLETKP 643
TTGDVIAI YN K+YEL V+ETKP
Sbjct: 189 TTGDVIAINYNEKIYELRVMETKP 212
>UniRef50_Q55BK0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 330
Score = 174 bits (423), Expect = 2e-42
Identities = 81/157 (51%), Positives = 111/157 (70%)
Frame = +2
Query: 173 FNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTH 352
+ ++ + +S LP E+ +E GGKI++PPSAL L+RLNI+YPM+F+++N S + +H
Sbjct: 25 YEQKFKAFPISFLP-KEKHSLESGGKILLPPSALNALSRLNIQYPMLFEISNPISGKKSH 83
Query: 353 CGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPK 532
CGVLEF+A+EG YLP WMM NL L+EG I I++ +L TF K QP + +F+DI+NPK
Sbjct: 84 CGVLEFIAEEGICYLPLWMMQNLQLKEGEFIDIKNATLAKGTFVKIQPRTSNFIDISNPK 143
Query: 533 AVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
AVLEN LR F+ LT D I I YN+ Y L V+E KP
Sbjct: 144 AVLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKP 180
>UniRef50_A5K150 Cluster: Ubiquitin fusion degradation protein,
putative; n=10; Aconoidasida|Rep: Ubiquitin fusion
degradation protein, putative - Plasmodium vivax
Length = 317
Score = 165 bits (401), Expect = 8e-40
Identities = 75/164 (45%), Positives = 111/164 (67%)
Frame = +2
Query: 152 FHEISRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNK 331
F IS PF Y CY VS + + D+E G KII+P +AL L R +I +PM+F+++N
Sbjct: 51 FLNISEPFTEEYTCYPVSFIG---KDDMENGNKIILPQTALNALARRHISWPMLFEVSNP 107
Query: 332 KSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDF 511
+++ TH GVLEF++DEG ++P+WMM L L+EG ++++ SVSLP TF K +P S DF
Sbjct: 108 YTEKRTHSGVLEFISDEGTCHMPYWMMQQLCLKEGDIVRVTSVSLPKGTFVKLKPCSTDF 167
Query: 512 LDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
++++N +AVLE LRN++ LT GD I I Y YE+ +++ KP
Sbjct: 168 MELSNHRAVLETALRNYATLTIGDNIVIHYLGNTYEIKIVDLKP 211
>UniRef50_Q19584 Cluster: Ubiquitin fusion degradation protein 1
homolog; n=3; Caenorhabditis|Rep: Ubiquitin fusion
degradation protein 1 homolog - Caenorhabditis elegans
Length = 342
Score = 155 bits (375), Expect = 1e-36
Identities = 77/160 (48%), Positives = 105/160 (65%), Gaps = 3/160 (1%)
Frame = +2
Query: 173 FNMTYRCYSVSMLPG---NERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKR 343
++ T+ Y LP ++ ++ GGKI++P SAL L + NI PM+FKLTN +R
Sbjct: 21 YDQTFVVYGPVFLPNATQSKISEINYGGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQR 80
Query: 344 LTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDIT 523
+THCGVLEF A EG+ LP WMM L L++G I+IES +LP ATF+K +P+S +FL+IT
Sbjct: 81 VTHCGVLEFSAPEGQAILPLWMMQQLGLDDGDTIRIESATLPKATFAKLKPMSLEFLNIT 140
Query: 524 NPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
NPKAVLE LR ++CLT D I Y + E V++ KP
Sbjct: 141 NPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVVDLKP 180
>UniRef50_Q5K888 Cluster: Ubiquitin fusion-degradation 1-like
protein, putative; n=2; Basidiomycota|Rep: Ubiquitin
fusion-degradation 1-like protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 516
Score = 150 bits (364), Expect = 2e-35
Identities = 76/172 (44%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Frame = +2
Query: 140 GFNMFHEISRP--FNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMI 313
GF FH P ++ ++ YS +++ G ER +V GGKIIMPPSAL +L+ L+I P
Sbjct: 70 GFGGFHSAPPPSAYDDYFKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWT 129
Query: 314 FKLTNKKS--KRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSK 487
F+L N +S + +TH GVLEF+A+EG V+LP WMM L LEEG I++ LP K
Sbjct: 130 FQLRNPRSPTQHITHAGVLEFIAEEGIVHLPAWMMKRLNLEEGDPIRLTGAKLPKGKMVK 189
Query: 488 FQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
Q + DFL +++PK+VLE+ LR +S L+ D+I I YNS +E ++ P
Sbjct: 190 IQAQNTDFLQVSDPKSVLESALRFYSTLSPDDIIEITYNSLTFEFLIMSVVP 241
>UniRef50_Q5ZBL5 Cluster: Putative ubiquitin fusion degradation
protein; n=3; Oryza sativa|Rep: Putative ubiquitin
fusion degradation protein - Oryza sativa subsp.
japonica (Rice)
Length = 296
Score = 142 bits (344), Expect = 7e-33
Identities = 68/160 (42%), Positives = 104/160 (65%)
Frame = +2
Query: 164 SRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKR 343
S F YRC +S+L ++++ + G ++ MP SAL++L L+IEYPM F++ N + +
Sbjct: 26 SATFAQLYRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATTLQ 82
Query: 344 LTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDIT 523
++CGVLEF ADEG +++P MM +L L E L+ + S S+P ATF K QP + DF ++
Sbjct: 83 TSYCGVLEFTADEGFIHIPTMMMEHLGLRENDLVLLRSTSIPKATFIKLQPHTSDFHKLS 142
Query: 524 NPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
P+ +LE RN+ CLTTG+ IA+ + Y L V+ET+P
Sbjct: 143 EPRYLLEYNFRNYFCLTTGETIAVAAGDRFYYLDVVETRP 182
>UniRef50_Q4UEN1 Cluster: Ubiquitin fusion degradation protein (UFD1
homologue), putative; n=1; Theileria annulata|Rep:
Ubiquitin fusion degradation protein (UFD1 homologue),
putative - Theileria annulata
Length = 270
Score = 136 bits (328), Expect = 6e-31
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 20/173 (11%)
Frame = +2
Query: 185 YRCYSVSMLPGNERQDVERGGK------------IIMPPSALEQLTRLNIEYPMIFKLTN 328
YRC+SVS R+ +E+G K I++P SAL +L NI +PM+F++ N
Sbjct: 18 YRCFSVSFAG---RESMEQGNKSIFHSLIFSFSLILLPQSALHELASRNISWPMMFEILN 74
Query: 329 KKSKRLTHCGVLEFVADEGRVYLPHWM--------MANLVLEEGALIQIESVSLPVATFS 484
K+ + T+ GVLEF+++EG +P+W+ M+NL L EG ++ I +VSLP A +
Sbjct: 75 PKNYKRTNGGVLEFISEEGTCNIPYWVIFYTIDLVMSNLGLNEGDIVTITNVSLPKANWV 134
Query: 485 KFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
K +PL+ED+ DI+NP+AVLEN LRN++ LT GDVI I Y VY +++ KP
Sbjct: 135 KLKPLNEDYWDISNPRAVLENALRNYATLTVGDVIPIHYIQTVYLFQIMDLKP 187
>UniRef50_A5BYW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 497
Score = 134 bits (323), Expect = 2e-30
Identities = 79/194 (40%), Positives = 112/194 (57%), Gaps = 25/194 (12%)
Frame = +2
Query: 137 FGFNMFHEISRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIF 316
FG +H +S F YRCY S + ++ +E GGKIIMPPSAL++L L+I+YPM+F
Sbjct: 69 FGGYGYHGMS--FEQKYRCYPASFI---DKPQIESGGKIIMPPSALDRLASLHIDYPMLF 123
Query: 317 KLTNKKSKRLTHCGVLEFVADEGRVYLPHW------------------------MMANLV 424
+L+N ++R++HCGVLEF+A+EG +Y+P+W MM N++
Sbjct: 124 ELSNPAAQRVSHCGVLEFIAEEGMIYMPYWVSFTTADVSRALIPVVILLIVSCQMMENML 183
Query: 425 LEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPKAV-LENCLRNFSCLTTGDVIAIKY 601
L+EG +Q + V L F P+ V LE LRNFSCLTTGD I + Y
Sbjct: 184 LQEGDTVQPHK-GMDVLNIEAAAVLDGFF---PTPRWVSLETTLRNFSCLTTGDSIMVAY 239
Query: 602 NSKVYELCVLETKP 643
N+K Y + ++ETKP
Sbjct: 240 NNKKYYIDIVETKP 253
>UniRef50_Q22Y58 Cluster: Ubiquitin fusion degradation protein UFD1
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Ubiquitin fusion degradation protein UFD1
containing protein - Tetrahymena thermophila SB210
Length = 371
Score = 122 bits (294), Expect = 7e-27
Identities = 59/142 (41%), Positives = 88/142 (61%), Gaps = 1/142 (0%)
Frame = +2
Query: 221 ERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLP 400
ER D+E+G KI++PPS L L+ N+ YPMIF + N + T+ GVLEF+A EG Y+P
Sbjct: 111 ERHDLEKGNKILLPPSVLNTLSASNLPYPMIFCVQNTYLNKQTYVGVLEFIAPEGTCYIP 170
Query: 401 HWMMANLVLEEGALIQIESVS-LPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTT 577
WM L +G IQ+ V+ + F K QP F+D+ +P+A+LE LRN++ L
Sbjct: 171 FWMFQMLQCFDGQQIQVTLVTDVKKGKFVKIQPHETAFIDLPDPRAILEKELRNYTVLHQ 230
Query: 578 GDVIAIKYNSKVYELCVLETKP 643
GD I I++ + +++ +LE KP
Sbjct: 231 GDTIHIEFMKQHFQIDILEVKP 252
>UniRef50_Q9SEV9 Cluster: Ubiquitin fusion degradation protein; n=1;
Guillardia theta|Rep: Ubiquitin fusion degradation
protein - Guillardia theta (Cryptomonas phi)
Length = 175
Score = 117 bits (281), Expect = 3e-25
Identities = 54/137 (39%), Positives = 84/137 (61%)
Frame = +2
Query: 233 VERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMM 412
+E G KI++P S L L + + P+IF++ N + + HCGV EF +D+G Y+P+WM
Sbjct: 21 LENGDKIVLPQSILNYLNQNDDLNPIIFEILNLDNNKKCHCGVYEFTSDDGCAYIPYWMF 80
Query: 413 ANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIA 592
NL + EG+ + L F K QP ++F I+NPKA+LE LR ++ LT + I+
Sbjct: 81 KNLEINEGSPLCFIQKCLEKGYFLKIQPQQKEFFQISNPKAILELNLRKYTSLTKKNTIS 140
Query: 593 IKYNSKVYELCVLETKP 643
I+YN+ +Y L ++E KP
Sbjct: 141 IEYNNNIYWLNIVEVKP 157
>UniRef50_Q8SR25 Cluster: UBIQUITIN FUSION DEGRADATION PROTEIN 1;
n=1; Encephalitozoon cuniculi|Rep: UBIQUITIN FUSION
DEGRADATION PROTEIN 1 - Encephalitozoon cuniculi
Length = 227
Score = 107 bits (257), Expect = 2e-22
Identities = 49/121 (40%), Positives = 72/121 (59%)
Frame = +2
Query: 242 GGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANL 421
GGK+I+P S L L I+ P F++++ THCGVLEF +EG V +P WM L
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGIYRTHCGVLEFTGEEGDVVVPSWMYQQL 90
Query: 422 VLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKY 601
+E+ + + ++ P+ F K P S DFL+I NPK LE+CLRN+ L+ GD I ++
Sbjct: 91 SMEDADKVVLRYMTFPLGKFVKLIPHSVDFLEIENPKVELESCLRNYQVLSEGDEILCQF 150
Query: 602 N 604
+
Sbjct: 151 D 151
>UniRef50_A0DT94 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_62,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 283
Score = 107 bits (256), Expect = 3e-22
Identities = 52/143 (36%), Positives = 89/143 (62%), Gaps = 2/143 (1%)
Frame = +2
Query: 221 ERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNK-KSKRLTHCGVLEFVADEGRVYL 397
+++++ +G KI++P SAL+Q+ L + PMIF+L + K+ T+ GVLEF A+EG +
Sbjct: 21 QKKNLNQGNKILLPASALQQVLHLKQQGPMIFRLQSTLDDKKYTYVGVLEFTAEEGTCVV 80
Query: 398 PHWMMANLVLEEGALIQIE-SVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLT 574
P WM+ ++ +G I I L + QP F+D+ +P+A+LEN LRNF CLT
Sbjct: 81 PDWMLESMGFFDGCNIIISHEKKLDQGKLIRIQPHETAFIDLPDPRAILENHLRNFICLT 140
Query: 575 TGDVIAIKYNSKVYELCVLETKP 643
G+ I+I +++ Y + +++ +P
Sbjct: 141 EGETISINFHNTNYLIDIVKVEP 163
>UniRef50_Q38AI5 Cluster: Ubiquitin fusion degradation protein,
putative; n=3; Trypanosoma|Rep: Ubiquitin fusion
degradation protein, putative - Trypanosoma brucei
Length = 306
Score = 103 bits (248), Expect = 3e-21
Identities = 48/133 (36%), Positives = 79/133 (59%)
Frame = +2
Query: 233 VERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMM 412
+ G ++I+PP+ L++L+ + + YP+ FKL N K + GVLEF A+EG + +P WM
Sbjct: 29 INSGSRVILPPTCLQKLSTMRVAYPLQFKLRNGKRGVTCYAGVLEFSAEEGHIVMPAWMF 88
Query: 413 ANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIA 592
+ L EG+ + IE+ +LP K +P +FL ++NPK VLE L ++ LT G I
Sbjct: 89 TAMGLCEGSTVAIETCTLPPGGLIKLRPQESNFLQLSNPKNVLEMRLSDYPVLTKGTSIV 148
Query: 593 IKYNSKVYELCVL 631
+ Y + + + V+
Sbjct: 149 LDYLDRDFVIDVI 161
>UniRef50_A2ECS3 Cluster: Ubiquitin fusion degradation protein,
putative; n=1; Trichomonas vaginalis G3|Rep: Ubiquitin
fusion degradation protein, putative - Trichomonas
vaginalis G3
Length = 281
Score = 100 bits (239), Expect = 3e-20
Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
Frame = +2
Query: 224 RQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPH 403
++D+ + +I+ + L Q N + FK+TN +++ + EF AD+G V +P+
Sbjct: 2 KEDLNQTSYVIVETAMLNQQMMEN--QMITFKITNPRTQESAYAVEREFTADQGTVIVPY 59
Query: 404 WMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLD-ITNPKAVLENCLRNFSCLTTG 580
W+MA + ++EG +QI +V LP AT + QP ++ F + I P+ VLE LRN+ CLT G
Sbjct: 60 WIMAKIGVDEGDTVQISTVELPAATRTVLQPKTKQFAENIKEPRIVLERELRNYPCLTQG 119
Query: 581 DVIAIKYNSKVYELCVLETKP 643
I I + + VY L VL+T+P
Sbjct: 120 STIEITFANVVYPLYVLKTEP 140
>UniRef50_Q7R480 Cluster: GLP_480_98798_99739; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_98798_99739 - Giardia lamblia
ATCC 50803
Length = 313
Score = 99.5 bits (237), Expect = 6e-20
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 3/143 (2%)
Frame = +2
Query: 224 RQDVERGGKIIMPPSALEQLTRLNIEYP---MIFKLTNKKSKRLTHCGVLEFVADEGRVY 394
R+ E GGKII+ L++L NI M F++ + K + HCGVL+F +Y
Sbjct: 36 RETFENGGKIILGHDILQRLLDKNIIEEGKGMHFRIHSPAHKIVIHCGVLDFSGANTLLY 95
Query: 395 LPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLT 574
P W+M + G + I S++L TF K QP S FL+I +P+AVL N L NFSC+
Sbjct: 96 APSWIMEYCNIRPGDSVVIASINLEPGTFMKIQPQSTKFLEIDDPEAVLTNLLPNFSCIM 155
Query: 575 TGDVIAIKYNSKVYELCVLETKP 643
G + ++ Y++ +L+TKP
Sbjct: 156 RGQYLRFEHAGIKYDIKILDTKP 178
>UniRef50_O23395 Cluster: UFD1 like protein; n=8; Magnoliophyta|Rep:
UFD1 like protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 778
Score = 85.8 bits (203), Expect = 8e-16
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Frame = +2
Query: 242 GGKIIMPPSALEQLTRLNI--EYPMIFKLT---NKKSKRLTHCGVLEFVADEGRVYLPHW 406
G KI +PPS +L+ + P+ F+L+ + +K+ TH GVLEF A++G + LP
Sbjct: 308 GDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKKTTHSGVLEFTAEDGTIGLPPH 367
Query: 407 MMANLVLEEGA----LIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLT 574
+ +NL L++I + LP +++K QP + F D+ N KA+LE LR + L+
Sbjct: 368 VWSNLFSTHDPMDVPLVEIRYIRLPKGSYAKLQPDNLGFSDLPNHKAILETILRQHATLS 427
Query: 575 TGDVIAIKYNSKVYELCVLETKP 643
DV+ + Y Y+L VLE +P
Sbjct: 428 LDDVLLVNYGQVSYKLQVLELRP 450
>UniRef50_Q4Q0A8 Cluster: Ubiquitin fusion degradation protein,
putative; n=4; Leishmania|Rep: Ubiquitin fusion
degradation protein, putative - Leishmania major
Length = 325
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/137 (31%), Positives = 76/137 (55%)
Frame = +2
Query: 224 RQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPH 403
+Q + G ++++P S L+ L R+ + YP+ F++ KR+ + VLEF A G V LP
Sbjct: 22 QQRINYGSRVLLPSSVLDDLCRITMVYPLQFEIITPAKKRV-YAAVLEFNAQAGSVVLPD 80
Query: 404 WMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGD 583
WM +L L +++++S SLP + K +P + + NP+ +LE L + LT G
Sbjct: 81 WMFQHLGLCGTMVVKVQSCSLPPGSLVKLRPHQKALVMFENPRHLLELRLAQYPVLTKGT 140
Query: 584 VIAIKYNSKVYELCVLE 634
I I Y + ++L +++
Sbjct: 141 TIVISYVDREFQLDLVD 157
>UniRef50_A2G735 Cluster: Ubiquitin fusion degradation protein,
putative; n=2; Trichomonas vaginalis G3|Rep: Ubiquitin
fusion degradation protein, putative - Trichomonas
vaginalis G3
Length = 409
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Frame = +2
Query: 233 VERGGKIIMPPSALEQLTRLNIEYPMI--FKLTNKKSKRLTHCGVLEFVADEGRVYLPHW 406
+E G++++P A+ Q+ P I F +TN ++K+ + G+ + +G + +P W
Sbjct: 19 LEYTGRVMLPLEAIAQIHNNFDNGPTISVFCITNTRTKQKVYAGMAPSDSRDGDIVMPLW 78
Query: 407 MMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDV 586
MM L +G +++++S P + FQPL F I++P VL LR+F LT G +
Sbjct: 79 MMDFLGANQGDMVRVQSARPPNGRSATFQPLDSSFNKISDPVTVLSKSLRDFPVLTQGSI 138
Query: 587 IAIKYNSKVYELCVLETKP 643
+ I + ++Y+L VL+T+P
Sbjct: 139 LPIDFAKRIYKLRVLKTEP 157
>UniRef50_A0CQS3 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 285
Score = 80.6 bits (190), Expect = 3e-14
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Frame = +2
Query: 182 TYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNK-KSKRLTHCG 358
T YS S ++ + G +I++PPS L ++ + M FKL + + K+ + G
Sbjct: 8 TLEVYSAS---SQNKKIINHGNRILLPPSILLEICNVYCG-TMTFKLQSVLEEKKSIYVG 63
Query: 359 VLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSL-PVATFSKFQPLSEDFLDITNPKA 535
VLEF ADEG +P W+ + G I I + + K QP F+ +++PK
Sbjct: 64 VLEFTADEGTCVVPDWIFDAMGFSNGLSIPINCNRINKFGSLIKVQPHKSAFIKLSDPKD 123
Query: 536 VLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
+L+ L+NF+CLT + I I Y Y + +++ +P
Sbjct: 124 ILKTYLKNFTCLTQDETITINYQDVNYLIDIVKVEP 159
>UniRef50_A2ETH3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 214
Score = 74.9 bits (176), Expect = 1e-12
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Frame = +2
Query: 179 MTYRCYSVSMLPGNE-RQDVERGGKIIMPPSALEQLTRLNIEYPMIFKLTNKKSKRLTHC 355
M++R + + P R+++ GKII+P + + +L E M F L N +++
Sbjct: 1 MSFRSTFLVVFPETVGRKELNETGKIILPSTIIAKLRN---ETLMQFLLKNPLTQKTIGA 57
Query: 356 GVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLDITNPK- 532
GV EF ++E +P WM NL L E I ++ P FQP + +I N K
Sbjct: 58 GVEEFSSEEPSCVVPRWMCENLGLTENDKIVVQFQKFPKIKELIFQPSDNESANILNEKQ 117
Query: 533 AVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
++E LR++ LT G ++ I + +K++ L VL TKP
Sbjct: 118 IIMEYTLRSYPVLTQGSILVINFANKMFFLKVLFTKP 154
>UniRef50_UPI00004997F3 Cluster: ubiquitin fusion degradation
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
ubiquitin fusion degradation protein - Entamoeba
histolytica HM-1:IMSS
Length = 447
Score = 72.9 bits (171), Expect = 6e-12
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Frame = +2
Query: 167 RPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY--PMIFKLTNKKS- 337
RP +T CY + Q + K++ P L++LT+ N ++ P++F+++NK
Sbjct: 11 RPIEVT--CYPFMYM--QTPQPPQPTDKVVFPAYVLDELTKQNPDFQAPILFEVSNKSQT 66
Query: 338 -KRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFL 514
K+ CGV F + + Y P W++ L ++ G + I V +P F+PL F
Sbjct: 67 FKKRIVCGVESFSSPDF-TYFPQWILDYLHIQPGDVATIFKVLIPKGKSVTFKPLQSTFY 125
Query: 515 DITNPKAVLENCLRNFSCLTTGDVIAIKYNS 607
+I +PK LE+ LRN+ LT I + N+
Sbjct: 126 NIEDPKKTLESILRNYMTLTLNTTITFQMNT 156
>UniRef50_Q4UIX9 Cluster: Ubiquitin-fusion degradation pathway
component, UFD1 homologue, putative; n=2; Theileria|Rep:
Ubiquitin-fusion degradation pathway component, UFD1
homologue, putative - Theileria annulata
Length = 321
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/103 (34%), Positives = 56/103 (54%)
Frame = +2
Query: 326 NKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSE 505
NK S+ C +EF DE +YLP W++ NL L+ ++ +E V L T + + L +
Sbjct: 195 NKISEECISCSAIEFRTDENYIYLPKWIINNLKLKPYDIVLVEPVKLSDCTNVELKCLEK 254
Query: 506 DFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLE 634
F D+ N K +LE+ L+ +S LT VI I + K Y V++
Sbjct: 255 GFYDLKNVKKILEDRLKYYSTLTINSVIPITVDKKTYNFQVVK 297
>UniRef50_A3LY47 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 717
Score = 63.3 bits (147), Expect = 5e-09
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Frame = +2
Query: 248 KIIMPPSALEQLTRL----NIEYPMIFKLTNKKSKRLTHCGVLEFVADEGR-VYLPHWMM 412
K I+P S L ++ + + +P+IFK+T+ +S + GV EF A E V LP W+
Sbjct: 23 KAILPASVLSRIVDIIPESELPHPLIFKITSSESLGSCYIGVREFSAPEDETVVLPDWIF 82
Query: 413 ANLVLEEGALIQIE-SVSLPVATFSKFQPLSEDFLDITNPKAVLENCL-RNFSCLTTGDV 586
L+ E ++++ S+ AT K +PL + + +ITN K LEN L + ++ LT+ +
Sbjct: 83 TKLLEPESVTVELQLKSSISKATSLKLKPL-QLYSNITNWKYFLENKLTQYYTTLTSKET 141
Query: 587 IAIKYNSKVYELCVLE 634
+ I+ ++ YEL + E
Sbjct: 142 LVIEDDNLRYELYIEE 157
>UniRef50_A7ASK6 Cluster: Ubiquitin fusion degradation protein UFD1,
putative; n=1; Babesia bovis|Rep: Ubiquitin fusion
degradation protein UFD1, putative - Babesia bovis
Length = 297
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/97 (32%), Positives = 45/97 (46%)
Frame = +2
Query: 338 KRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSEDFLD 517
K C +F E +YLP WMM ++ L + + + L A F P+ F
Sbjct: 173 KERVACSSWDFRPQESYIYLPRWMMESMDLRPYDTVYVTQLKLQDAIFVSISPVESSFFA 232
Query: 518 ITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCV 628
++ PKAVLE L+ +S LT G I I + Y L V
Sbjct: 233 LSAPKAVLEEHLKQYSSLTRGTTIQITHEGITYHLRV 269
>UniRef50_UPI000023E8B2 Cluster: hypothetical protein FG08129.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG08129.1 - Gibberella zeae PH-1
Length = 741
Score = 51.2 bits (117), Expect = 2e-05
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 22/135 (16%)
Frame = +2
Query: 305 PMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEE----------------- 433
P+IF+L N K+K G+ EF A EG + L W+ L ++E
Sbjct: 73 PLIFRLVNPKNKNAVFAGIREFSATEGTMGLSPWLTEALGIQENEYASLKEVVDLEQDPA 132
Query: 434 ---GALIQIESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLR-NFSCLTTGDVIAIK- 598
G I++E+ LP T+ +F+PL + + + KA+LE LR +F+ L+ G +IA+K
Sbjct: 133 QLDGIQIKVEARQLPKGTYVRFRPLEAGY-NPDDWKALLERQLREDFTTLSKGAMIAVKG 191
Query: 599 YNSKVYELCVLETKP 643
+ + ++L V + P
Sbjct: 192 AHGEEFKLLVDKVAP 206
>UniRef50_Q7R828 Cluster: Similar to ubiquitin fusion degradation 1
like-related; n=5; Plasmodium|Rep: Similar to ubiquitin
fusion degradation 1 like-related - Plasmodium yoelii
yoelii
Length = 209
Score = 50.8 bits (116), Expect = 3e-05
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +2
Query: 344 LTHCGVLEFVADEGRVYLPHWMMANL-VLEEGALIQI--ESVSLPVATFSKFQPLSEDFL 514
+TH VLEF ++EG + + + NL + E+ +I+I +L F KF+ L+E+
Sbjct: 1 MTHACVLEFSSNEGIIEVSENIKENLGIFEKNGVIRILISYANLSKCDFIKFESLNENIN 60
Query: 515 DITNPKAVLENCLR-NFSCLTTGDVIAIKYNSKVY 616
DI K +LEN L N+S LT GD + I N K Y
Sbjct: 61 DIKYVKNLLENKLSLNYSTLTLGDYVHIN-NLKFY 94
>UniRef50_A4RPN9 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 788
Score = 44.4 bits (100), Expect(2) = 7e-05
Identities = 18/46 (39%), Positives = 32/46 (69%)
Frame = +2
Query: 296 IEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEE 433
+ YP++F+L N+++ + H GV EF A+EG+V L +++ +L L E
Sbjct: 107 LPYPLMFRLVNERNGKFVHAGVREFSAEEGQVTLSPFLLRSLGLAE 152
Score = 24.6 bits (51), Expect(2) = 7e-05
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 242 GGKIIMPPSALEQLTRLN 295
G KII+P SAL+QL N
Sbjct: 50 GDKIILPSSALQQLLDAN 67
>UniRef50_Q01D99 Cluster: Ubiquitin fusion-degradation protein; n=2;
Ostreococcus|Rep: Ubiquitin fusion-degradation protein -
Ostreococcus tauri
Length = 476
Score = 44.8 bits (101), Expect = 0.002
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Frame = +2
Query: 341 RLTHCGVLEFVA-DEGRVYLPHWMMANLVLEE---GALIQIESVSLPVATFSKFQPLSED 508
R H GVL++ G + +P M+ +L L E GA +++ +LP AT +P + +
Sbjct: 77 RTCHVGVLDYGGVSTGMIGIPRPMLRSLGLRETDVGAEVRVTYAALPSATRMTLKPKTNE 136
Query: 509 FLDIT----NPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKP 643
F N + +LE + S T GD I + Y+L V+ +P
Sbjct: 137 FARACEAEENVRDILERTMMGRSAATVGDEIEVTVRDATYDLRVVRVEP 185
>UniRef50_Q5CTG1 Cluster: Ubiquitin fusion degradation (UFD1) family
protein, double Psi beta barrel fold; n=2;
Cryptosporidium|Rep: Ubiquitin fusion degradation (UFD1)
family protein, double Psi beta barrel fold -
Cryptosporidium parvum Iowa II
Length = 658
Score = 44.4 bits (100), Expect = 0.002
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Frame = +2
Query: 197 SVSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIFK---LTNKKSKRL----THC 355
S S P N D ++I+P + L+ L+ YP+ F L + S+ + THC
Sbjct: 102 SNSKFPNNGETD-----QVILPNNLLKILSSDESIYPLYFNIKCLNHHISENINPIETHC 156
Query: 356 GVLEFVADEGRVYLPHWMMANLVLEEG----------ALIQIESVSLPVATFSKFQPL-S 502
GVL++ + G + LP+ ++ L + IQI L +F+ F+ L +
Sbjct: 157 GVLDYSEEPGYISLPNKVLRCLNINPNDSDFKSNKPIIWIQITYKKLLKGSFASFEILNN 216
Query: 503 EDFLDITNPKAVLENCLRN-FSCLTTGDVIAI---KYNSKVYELCVLETK 640
+D + + +++LE+ LRN F LT GD + I Y+S Y + +++ K
Sbjct: 217 QDIFKMHDIESLLESYLRNHFLTLTIGDTLMINQPNYSSNNYCISLIKVK 266
>UniRef50_A6SCN4 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 749
Score = 39.1 bits (87), Expect(2) = 0.003
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 284 TRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANL 421
T+ + +P+ F+L N K+ + + G+ EF ADEG V L +++ L
Sbjct: 80 TQQQLPHPLTFRLVNSKNGNVVYAGIREFSADEGEVVLSPFLLEAL 125
Score = 24.2 bits (50), Expect(2) = 0.003
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 242 GGKIIMPPSALEQL 283
G KI++P SALEQL
Sbjct: 27 GDKILLPQSALEQL 40
>UniRef50_Q1DMD1 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 761
Score = 41.9 bits (94), Expect = 0.013
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +2
Query: 296 IEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGAL 442
+ YP+ F++ N K+ R+ H G+LEF A+E V L +++ +L + + L
Sbjct: 80 LPYPLTFRIVNPKNGRVIHSGILEFSAEENEVALSPFLLQSLGIHQPEL 128
>UniRef50_A6LHX9 Cluster: Sensor protein; n=2; Parabacteroides|Rep:
Sensor protein - Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC11152)
Length = 283
Score = 36.3 bits (80), Expect = 0.63
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = +2
Query: 92 EFRYLLKLTKIEMFQFGFNMFHEISRPFNMTYRCYSVSMLPGNERQDVERGGKIIMPPSA 271
+ + L KL+ + M G + HEI P N +S ++ +D+ K ++PP +
Sbjct: 14 QVKNLEKLSSLGMLSAG--IAHEIQNPLNFVINFSKLSSKLVDDLEDILEEEKDVLPPES 71
Query: 272 LEQLTRLNIEYPMIFKLTNKKSKRLTHCG 358
E+LT L+ E+ I + K++ G
Sbjct: 72 WEKLTALHEEFSEIVNDLHGNLKKIEEHG 100
>UniRef50_A4RI58 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1679
Score = 33.9 bits (74), Expect = 3.4
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -1
Query: 432 SSRTRFAIIQCGRYTLPSSATNSSTPQ*VSLFDFLFVNLNIIGYSILSL--VSCSNADGG 259
SS F + GR L +A + PQ +S+ FL NLN+ GYSI + SNA
Sbjct: 151 SSPILFFLCSDGRQNL--TAPEPTAPQNISMCLFLIYNLNLRGYSIALIDDAEISNAKVA 208
Query: 258 IIILPPLSTSCLSFPGNIETE 196
+ P + + F + E
Sbjct: 209 ATVFTPTHDNAIPFADQLFPE 229
>UniRef50_P75356 Cluster: Putative ABC transporter ATP-binding
protein MG303 homolog; n=5; Mycoplasma|Rep: Putative ABC
transporter ATP-binding protein MG303 homolog -
Mycoplasma pneumoniae
Length = 353
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -1
Query: 570 KHEKLRKQFSNTAFGFVMSKKSSDKGWN--LENVATGSDTLSICIKAPSSRTRFAIIQCG 397
KH + KQF N+ G+V+ K + LE V TG+ L +C K + + + CG
Sbjct: 143 KHNRATKQFQNS-IGYVLQKAEEQFLCDSVLEEVLTGAINLGLCQKGDVNFAKKYLEMCG 201
Query: 396 RYTLP 382
+ +P
Sbjct: 202 LHHIP 206
>UniRef50_A6AMN1 Cluster: GntR-family transcriptional regulator;
n=2; Vibrio|Rep: GntR-family transcriptional regulator -
Vibrio harveyi HY01
Length = 238
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/89 (30%), Positives = 44/89 (49%)
Frame = +2
Query: 329 KKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQIESVSLPVATFSKFQPLSED 508
K +KRL ++ + E YL W + L L +G + QIE LPV+ F K ++++
Sbjct: 92 KLNKRLPTTHEMQMFSIEEDEYL--WNIKRLRLIQGKVTQIEETKLPVSMFPK---ITDE 146
Query: 509 FLDITNPKAVLENCLRNFSCLTTGDVIAI 595
++ + K VL L S LT+ I +
Sbjct: 147 IIESSLQKHVLSLGLEIDSYLTSYQAINV 175
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,075,347
Number of Sequences: 1657284
Number of extensions: 10991702
Number of successful extensions: 25200
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 24544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25182
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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