Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f04r
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P14619 Cluster: cGMP-dependent protein kinase 1, beta i...    36   1.3  
UniRef50_Q7RQJ1 Cluster: Putative uncharacterized protein PY0110...    33   5.4  
UniRef50_Q8I332 Cluster: Putative uncharacterized protein PFI058...    33   9.5  

>UniRef50_P14619 Cluster: cGMP-dependent protein kinase 1, beta
           isozyme; n=49; Bilateria|Rep: cGMP-dependent protein
           kinase 1, beta isozyme - Homo sapiens (Human)
          Length = 686

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 724 DADEPPPDDLSGWDANF 674
           D DEPPPDD SGWD +F
Sbjct: 670 DNDEPPPDDNSGWDIDF 686


>UniRef50_Q7RQJ1 Cluster: Putative uncharacterized protein PY01106;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01106 - Plasmodium yoelii yoelii
          Length = 1176

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 136 LSRK*KKIFYNISFKNNYDIHTIMTEIK 53
           +S+K  +I Y +S  N YDIHT+  EIK
Sbjct: 413 ISQKLNQIEYELSIHNKYDIHTVKDEIK 440


>UniRef50_Q8I332 Cluster: Putative uncharacterized protein PFI0585c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFI0585c - Plasmodium falciparum (isolate 3D7)
          Length = 1568

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -2

Query: 385 NSIVYRCDSMTSAISITHLMNIVNVFFSNRLFLMLMNFLKIFTLLM*KLQIIEFICKMCL 206
           N I+   +++   I     +NI N++ S    +  M F  IF  ++ KL+    I    L
Sbjct: 344 NCILSGLNNLDYFIKKNMYVNIFNLYISYSTLIQNMIFNPIFNNVLFKLKEYYIIINNLL 403

Query: 205 LLLNVFSFILYRFFF 161
           LL N  +F+  ++FF
Sbjct: 404 LLNNSINFLKIKYFF 418


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,864,890
Number of Sequences: 1657284
Number of extensions: 11024790
Number of successful extensions: 24872
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24855
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)