Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f04r
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    24   4.2  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    23   9.7  
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    23   9.7  

>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 715 EPPPDDLSGWDANF*FGRTICVQR*QILTRLYCCMTAFE 599
           +PP +DL    A+F   + +C+QR Q      CC  AF+
Sbjct: 194 DPPGEDL----ASFSLRQGMCLQRNQQPPTADCCTRAFK 228


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 653 TYSTAELKVRIPTGEIVGGRF 715
           T+S+ ++K+  PT   VGG+F
Sbjct: 134 TFSSGKMKMMCPTIVSVGGQF 154


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 337 THLMNIVNVFFSNR 296
           ++L+NIVN F SNR
Sbjct: 97  SYLINIVNSFISNR 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,168
Number of Sequences: 2352
Number of extensions: 13041
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)