Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f03r
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   6.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.2  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 743 LIYGTP--RAATVRARTSLKLWGLDRDSYRRI 654
           LIYG     A T +A+   +L+ + RD+YR I
Sbjct: 53  LIYGYAGINAETFKAQPLNELFDVTRDNYRHI 84


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 445 NKEAREARQWKWG 407
           NK  R+  +W+WG
Sbjct: 560 NKLLRKGEKWRWG 572


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 150 CSNKLSFIFGHSITEVS 200
           C  ++SFI G+   EVS
Sbjct: 265 CDQRISFIAGYMTEEVS 281


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 655 FSWALLLGNEECTTSSSQESLY 590
           F W L+L   +C T SS  SLY
Sbjct: 224 FGWTLILILAKCIT-SSLSSLY 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,522
Number of Sequences: 336
Number of extensions: 3137
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)