Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f03r
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0453 + 10420585-10421661,10422015-10422146,10422232-104224... 60 3e-09
05_04_0393 - 20895485-20895645,20895750-20896358,20896541-208966... 51 1e-06
01_06_0511 + 29937167-29937264,29937362-29937577,29937938-299380... 43 3e-04
07_01_0542 + 4002542-4003119,4004347-4004404,4004518-4004835,400... 42 4e-04
06_01_1005 - 7810210-7810907,7811005-7811080,7811180-7811368,781... 42 5e-04
01_06_0066 - 26113761-26114683,26115031-26115106,26115204-261154... 39 0.004
04_04_0769 + 27957562-27957745,27958444-27958511,27958977-279590... 39 0.005
06_01_1022 + 7992901-7994676 38 0.007
06_03_0291 + 19198302-19198333,19199218-19199734,19200171-192003... 38 0.009
12_02_0281 + 16744690-16744727,16744744-16745611,16746195-167467... 35 0.062
04_04_1373 + 33025059-33025422,33025510-33025551,33025836-330260... 35 0.062
02_02_0300 - 8746526-8747224,8749033-8749089,8749414-8749650,875... 33 0.33
03_05_0484 + 24808817-24809620,24810263-24810567,24811363-24812389 32 0.58
08_01_0132 + 1055977-1056483,1058083-1058186,1058330-1058385,105... 31 1.0
01_06_0933 - 33161687-33162205,33162290-33162376,33162459-331626... 30 1.8
12_02_1190 - 26814289-26814438,26814526-26814718,26814998-268152... 29 3.1
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 29 5.4
05_05_0385 + 24566916-24567503,24568609-24568824,24568916-245692... 29 5.4
07_01_1105 - 10173039-10173156,10173715-10173716,10174550-101745... 28 7.1
02_01_0205 - 1379448-1379696,1379827-1379901,1379983-1380056,138... 28 7.1
11_01_0081 - 622811-623551 28 9.4
03_06_0747 - 35967119-35967185,35967325-35967422,35967533-359675... 28 9.4
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 9.4
>02_02_0453 + 10420585-10421661,10422015-10422146,10422232-10422456,
10422555-10422680,10422777-10422839,10423214-10423296,
10424078-10424309,10424421-10424489,10424532-10424731,
10424819-10424894,10425015-10425081,10425194-10425471,
10425600-10425787,10426235-10426391,10426496-10426741
Length = 1072
Score = 59.7 bits (138), Expect = 3e-09
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
++L+Y P A+VRA T+ LW L R+ +R ILM + + L V + L
Sbjct: 566 LALMYNKPLQASVRAVTTGTLWALKREDFRGILMSEFSNIPSL--KLLRSVELFTRLTML 623
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTA--------VVLQQRGAGGEAVE 414
+ +AD+L V+F D + IV + + + YII G V R G E
Sbjct: 624 QLSQLADSLVEVTFGDGQMIVDKNDDASSLYIIQRGRVKLKLAADQVAQSSREDGNYVFE 683
Query: 413 VGRLGPSDYFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERVLG 276
+ G +FGE A L A T + G + C + + +F+ ++G
Sbjct: 684 IDEGG---HFGEWA-LFGETIAFTAMSVGDVTCSTIAKEKFDSIIG 725
Score = 44.4 bits (100), Expect = 1e-04
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Frame = -2
Query: 692 KLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSET 513
+LW S+R+ +R ++D FL R L + + D ++ V +
Sbjct: 462 RLWVPPSPSHRKTWEEQAHIERILHDHFLFR-----KLTDSQCHVLLDCMQRVEVKAGDI 516
Query: 512 IVRQGEPGNDFYIIVEGTAVVLQ-QRGAGGEAVEVGRLGPSD---YFGEIALLLDRPRAA 345
+V+QG G FY++ G VL Q G E +V +D FGE+AL+ ++P A
Sbjct: 517 VVQQGGEGECFYVVGSGEFEVLAIQEEDGKEVTKVLHRYTADKLSSFGELALMYNKPLQA 576
Query: 344 TVRA 333
+VRA
Sbjct: 577 SVRA 580
>05_04_0393 -
20895485-20895645,20895750-20896358,20896541-20896616,
20896729-20896920,20897118-20897438,20897880-20898119,
20898205-20898522,20898621-20898678,20898778-20898936,
20900090-20900308,20900400-20900614
Length = 855
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/107 (27%), Positives = 52/107 (48%)
Frame = -2
Query: 599 VSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEA 420
V + + + + L + ++P E ++ Q E +D YI+V G V+ G E
Sbjct: 389 VYLFKGVSREVLLLMVTKMKPEYIPPKEDVIVQNEAPDDVYIVVSGEVEVIYSDGEAEER 448
Query: 419 VEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERVL 279
V V LG FGE++ L DRP++ T+R + ++L +A + +
Sbjct: 449 V-VATLGTRGVFGEVSALSDRPQSFTLRTRTLCQLLRLRQAALKEAM 494
>01_06_0511 +
29937167-29937264,29937362-29937577,29937938-29938093,
29939614-29939671,29939768-29940085,29940160-29940399,
29940489-29940587,29940676-29940711,29941183-29941368,
29941442-29941709,29941805-29941911
Length = 593
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/89 (29%), Positives = 43/89 (48%)
Frame = -2
Query: 563 LTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYF 384
L + ++ SF I+ + E D YIIV G VL G E +V R+GP
Sbjct: 360 LPLVAEMKAESFPPKADIILENEASTDCYIIVSGEVEVLTTLEDGTEK-QVMRIGPRGMA 418
Query: 383 GEIALLLDRPRAATVRAHGPLKCVKLDRA 297
GEI ++ + P+ T+R+ + V++ +
Sbjct: 419 GEIGVMFNIPQPFTIRSRKLTQLVRISHS 447
>07_01_0542 +
4002542-4003119,4004347-4004404,4004518-4004835,
4005201-4005446,4005550-4005648,4005912-4006097,
4006204-4006401,4006521-4006596,4006721-4007637
Length = 891
Score = 42.3 bits (95), Expect = 4e-04
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = -2
Query: 530 FNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPR 351
F E I+ Q E DFYIIV G+ + G D GEI +L RP+
Sbjct: 409 FAPREDIILQNEAPADFYIIVSGSMLA-------------GMAKSGDVVGEIGVLCYRPQ 455
Query: 350 AATVRAHGPLKCVKLDRARFERVL-GLCAD--ILKRNIAQY 237
T R + ++LDRA F R++ AD I+ N+ QY
Sbjct: 456 LFTARTRSLCQLLRLDRAAFLRIIQSNIADGTIVMNNLIQY 496
>06_01_1005 -
7810210-7810907,7811005-7811080,7811180-7811368,
7811507-7811728,7811906-7812004,7812112-7812192,
7812384-7812679,7812777-7813116,7813221-7813284,
7813511-7813735,7816958-7817244
Length = 858
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/115 (24%), Positives = 50/115 (43%)
Frame = -2
Query: 623 MYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQ 444
+Y ++ + + + + L+ F E I+ QG + Y + G A+
Sbjct: 409 LYKPYIESIPLFKGCSAEFIQQIVIRLQEEFFLPGEVILEQGSAVDQLYFVCHG-ALEGV 467
Query: 443 QRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERVL 279
G G+ + L P FGEIA+L + P+ TVR + ++LD+ F +L
Sbjct: 468 GIGEDGQEETILMLEPESSFGEIAVLCNIPQPFTVRVCELCRLLRLDKQSFTNIL 522
>01_06_0066 -
26113761-26114683,26115031-26115106,26115204-26115401,
26115829-26116014,26116292-26116447,26116486-26116731,
26116832-26117149,26117235-26117292,26117472-26117837,
26119300-26119604
Length = 943
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = -2
Query: 530 FNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPR 351
F E ++ Q E DFYI+V G+ V+ Q GE V GEI +L RP+
Sbjct: 459 FPPREDVILQNEAPTDFYILVSGSVVI--QVATSGEVV-----------GEIGVLCYRPQ 505
Query: 350 AATVRAHGPLKCVKLDRARF 291
TVR + ++L+R F
Sbjct: 506 LFTVRTRSLCQLLRLNRTAF 525
>04_04_0769 +
27957562-27957745,27958444-27958511,27958977-27959058,
27959193-27959239,27959349-27959474,27960439-27960526,
27960922-27961034,27961976-27962038,27962110-27962165,
27962502-27962594,27962991-27963092,27963178-27963226,
27963318-27963386,27963486-27963572
Length = 408
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/78 (30%), Positives = 36/78 (46%)
Frame = -2
Query: 614 EFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRG 435
EFL +V +L+ L +ADA+ + + R+G+P + YII++G A V
Sbjct: 33 EFLGQVPLLQCLPSSSIRRIADAVLVKRYEPGGYVAREGDPVDGLYIILDGQAEVSAPAN 92
Query: 434 AGGEAVEVGRLGPSDYFG 381
E L DYFG
Sbjct: 93 TEEENRPDYVLNKYDYFG 110
>06_01_1022 + 7992901-7994676
Length = 591
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -2
Query: 530 FNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPR 351
F ++ + E D YII+ G L G E V R+GP GEI ++ P+
Sbjct: 370 FPPKANVILENETSTDCYIIISGEVEALTTLADGTEK-HVKRIGPRGMAGEIGVMFSIPQ 428
Query: 350 AATVRAHGPLKCVKL 306
T+R+ + V++
Sbjct: 429 PFTIRSRRLTQVVRI 443
>06_03_0291 +
19198302-19198333,19199218-19199734,19200171-19200383,
19201067-19201111,19201671-19201945,19202041-19202152,
19202453-19202539,19202727-19202963,19204127-19204825
Length = 738
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/85 (24%), Positives = 38/85 (44%)
Frame = -2
Query: 632 KRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAV 453
KR + L RV + E+++ + D L+PV + + I+R+ +P N+ I+ G +
Sbjct: 496 KRHLCLSLLMRVPMFENMDDQLLNALCDRLKPVLYTEGSCIIREEDPVNEMLFIMRGNLM 555
Query: 452 VLQQRGAGGEAVEVGRLGPSDYFGE 378
+ G L D+ GE
Sbjct: 556 SMTTNGGRTGFFNSDVLKGGDFCGE 580
>12_02_0281 +
16744690-16744727,16744744-16745611,16746195-16746725,
16747737-16748549
Length = 749
Score = 35.1 bits (77), Expect = 0.062
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Frame = -2
Query: 695 LKLWGLDRDSYRRILMGSTIR--KRRMYDEFLSRVSILESLEKWERLTVADALEPVSFND 522
L+ G+D DS R L R KR + + RV + ++++ + + L+P +
Sbjct: 491 LETRGVDEDSLVRSLPKDLRRDVKRHLCLRLVRRVPLFANMDERLLDAICERLKPSLCTE 550
Query: 521 SETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYFGE--IALLLDRPRA 348
+ I+R+G+P ++ I+ G G G L D+ GE + LD P+A
Sbjct: 551 ATYILREGDPVDEMLFIIRGRLESSTTDGGRMGFFNRGLLKEGDFCGEELLTWALD-PKA 609
Query: 347 ATVRAHGPLKCVKLDRARFERVLGLCADILKRNIAQY 237
A A+ PL + L AD LK Q+
Sbjct: 610 A---ANLPLSTRTVKAISEVEAFALHADELKFVAGQF 643
>04_04_1373 +
33025059-33025422,33025510-33025551,33025836-33026054,
33026145-33026384,33026483-33027508,33027770-33028545
Length = 888
Score = 35.1 bits (77), Expect = 0.062
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = -2
Query: 725 RAATVRARTSL--KLWGLDRD--SYRRILMGSTIRKRRMYDEFLSRVSILESLEKWE-RL 561
RA+ ++A ++L + WG D S+ R+ S+ KRR+Y LS +SI + WE +
Sbjct: 39 RASLIQANSTLVPRSWGQTEDCCSWERVRCDSS--KRRVYQLNLSSMSIADDFFSWELNI 96
Query: 560 TVADALEPVSFND 522
TV A + F D
Sbjct: 97 TVFSAFRDLQFLD 109
>02_02_0300 -
8746526-8747224,8749033-8749089,8749414-8749650,
8750061-8750172,8750258-8750538,8752032-8752244,
8753105-8753636,8753871-8753899
Length = 719
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = -2
Query: 599 VSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEA 420
V + E++++ + D L+P+ + + I+R+G+P N+ I+ G + G
Sbjct: 488 VPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTTNGGQTGF 547
Query: 419 VEVGRLGPSDYFGE 378
+ D+ GE
Sbjct: 548 FNSNIIKGGDFCGE 561
>03_05_0484 + 24808817-24809620,24810263-24810567,24811363-24812389
Length = 711
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/85 (21%), Positives = 36/85 (42%)
Frame = -2
Query: 632 KRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAV 453
KR + + RV + ++++ + + L P + + I+R+G+P + I+ G
Sbjct: 476 KRHLCLGLVRRVPLFANMDERLLDAICERLRPALYTERTFIIREGDPVDQMLFIIRGCLE 535
Query: 452 VLQQRGAGGEAVEVGRLGPSDYFGE 378
+ G L SD+ GE
Sbjct: 536 SITTDGGRSGFFNRSLLEESDFCGE 560
>08_01_0132 +
1055977-1056483,1058083-1058186,1058330-1058385,
1058534-1058688,1058842-1058955,1059207-1059449
Length = 392
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -3
Query: 394 QTTSARSRCCWTGRE--PPPCALTARSNASSSTVPDLKEFLVSVPTFSRETSPNTTALY 224
+T A S GR+ P P + ++ S++SSS+ P ++ + P+ +R +SP T A +
Sbjct: 73 RTAHAASGGVMGGRDTSPSPSSYSSSSSSSSSSSPSVRHYHYYPPSPTRSSSPPTPAAH 131
>01_06_0933 -
33161687-33162205,33162290-33162376,33162459-33162695,
33162778-33162886,33162997-33163313,33163398-33163607,
33165380-33165901
Length = 666
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = -2
Query: 614 EFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRG 435
+ + +V + + ++ + D ++ + F E IVR+G+P IV G Q
Sbjct: 461 DLVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQSSQVLR 520
Query: 434 AGGEAVEVGRLGPSDYFGE 378
G A LGP ++ G+
Sbjct: 521 TG--ATSCCTLGPGNFSGD 537
>12_02_1190 -
26814289-26814438,26814526-26814718,26814998-26815233,
26815363-26815535,26815651-26815701,26816686-26817079
Length = 398
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = -2
Query: 671 DSYRRILMGSTIRKRRMYDEFLSRVSILESLEKWERLT-------VADALEPVSFND 522
D +R+ + G +R R +DE V+ L+S +W L + DA+E +N+
Sbjct: 315 DKWRKFMKGQILRARLFFDEAEKGVAHLDSASRWPVLASLWLYRQILDAIEANDYNN 371
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -3
Query: 388 TSARSRCCWTGREPPPCAL-TARSNASSSTVPDLKEFLVSVPTFSRETSPNTTALYRFRY 212
TS S + PPP + T R A+ S P F VP SP TT YRF Y
Sbjct: 100 TSFTSEEVFVPAPPPPLLVSTVRRPAAPSAQPIATMFTWPVPPRGWTVSP-TTGRYRFGY 158
Query: 211 KSCDETS 191
E+S
Sbjct: 159 GFGGESS 165
>05_05_0385 +
24566916-24567503,24568609-24568824,24568916-24569241,
24569906-24570338,24570769-24571281
Length = 691
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -2
Query: 614 EFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRG 435
+ + +V + ++ + D ++ + F E IVR+G+P IV G Q
Sbjct: 488 DLVRQVPLFHHMDDLVLENICDRVKSLIFPKGEIIVREGDPVQRMLFIVRGHLQCSQVMR 547
Query: 434 AGGEAVEVGRLGPSDYFGE 378
G A LGP ++ G+
Sbjct: 548 NG--ATSWCTLGPGNFSGD 564
>07_01_1105 - 10173039-10173156,10173715-10173716,10174550-10174584,
10174696-10174765,10175163-10176707,10176770-10178062
Length = 1020
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3
Query: 322 SNASSSTVPDLKEFLVSVPTFSRETSPNTTALYRFRYKSCDETSVILCPNMKLNLFEQKP 143
S P+LK +L V + PN T+ + R ++C++ LC N+ NL E P
Sbjct: 899 SGVKDEHFPELK-YLSIVRCGKLKVLPNFTSGPKQRIRNCEKLLQPLCQNIHWNLMEYIP 957
>02_01_0205 -
1379448-1379696,1379827-1379901,1379983-1380056,
1380150-1380237,1380327-1380475,1380688-1380847,
1380933-1381088,1381177-1381365,1381481-1381714,
1381785-1382009,1382097-1382177
Length = 559
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 680 LDRDSYRRILMGST-IRKRRMYDEFLSRVSILESLEKWERLTVADA-LEPVSFNDSETIV 507
+D D+ R +++ ++ DE SR +LE +EKW+ ++ LE + N++ V
Sbjct: 346 IDSDAKRSLILERLEVQISEAKDEEFSRKDVLEKMEKWQAALEEESWLEEYNRNENRYNV 405
Query: 506 RQG 498
+G
Sbjct: 406 GKG 408
>11_01_0081 - 622811-623551
Length = 246
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 367 CWTGREPPPCALTARSNASSSTVPDLKEFLVS 272
CW+ +PPP A ++ +S TV D VS
Sbjct: 41 CWSSLQPPPFANYMHADITSYTVVDSSTIYVS 72
>03_06_0747 -
35967119-35967185,35967325-35967422,35967533-35967574,
35967734-35967782,35967971-35968047,35968306-35968362,
35968511-35968611,35968698-35969106
Length = 299
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 352 EPPPCALTARSNASSSTVPDLKEFLVSVP 266
E P C+L +R S TV LK FL++VP
Sbjct: 179 EGPRCSLRSRKVYSDLTVDYLKMFLLNVP 207
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 27.9 bits (59), Expect = 9.4
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +1
Query: 439 LCCSTTA-VPSTMM*KSFPGSP*RTMVSLSLKDTGSNASATVSRSHFSKLSNIETLERNS 615
LC S + + S K +PG+ ++ SLSL +N A + + LS +E L+ +
Sbjct: 423 LCSSLQSLILSNNKIKRWPGTVFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSG 482
Query: 616 SYILRFLIVEPMRIRR*ESRSSPHNLREVRARTVAARGVP*IKLILK 756
S + EP + + PH L+E+ R + G P L LK
Sbjct: 483 S---ASSLPEPSAVSK-----LPH-LKELYLRRMKLHGFPDSLLGLK 520
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,999,674
Number of Sequences: 37544
Number of extensions: 380599
Number of successful extensions: 1293
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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